| | gene | name | fitness | t score | description | |
|---|
| b2904 | gcvH | +2.0 | 10.8 | glycine cleavage system protein H (NCBI) | compare |
| b2903 | gcvP | +1.8 | 17.1 | glycine dehydrogenase (NCBI) | compare |
| b2905 | gcvT | +1.6 | 11.9 | glycine cleavage system aminomethyltransferase T (NCBI) | compare |
| b2808 | gcvA | +1.6 | 9.2 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0059 | hepA | +1.2 | 11.2 | ATP-dependent helicase HepA (NCBI) | compare |
| b3977 | tyrU | +1.2 | 2.2 | tRNA-Tyr (NCBI) | compare |
| b4203 | rplI | +1.1 | 6.3 | 50S ribosomal protein L9 (NCBI) | compare |
| b2829 | ptsP | +1.0 | 8.0 | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | compare |
| b3206 | npr | +1.0 | 5.8 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4546 | ypeB | +1.0 | 2.1 | hypothetical protein (NCBI) | compare |
| b3164 | pnp | +0.9 | 3.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2951 | yggS | +0.9 | 5.2 | predicted enzyme (NCBI) | compare |
| b2688 | gshA | +0.8 | 6.5 | glutamate--cysteine ligase (NCBI) | compare |
| b2114 | metG | +0.8 | 2.2 | methionyl-tRNA synthetase (NCBI) | compare |
| b1161 | ycgX | +0.8 | 0.8 | hypothetical protein (NCBI) | compare |
| b1222 | narX | +0.8 | 4.1 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b2236 | yfaE | +0.8 | 3.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b4568 | ytjA | +0.7 | 2.3 | predicted protein (RefSeq) | compare |
| b1438 | ydcQ | +0.7 | 3.6 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b1514 | lsrC | +0.7 | 2.2 | AI2 transporter (NCBI) | compare |
| b1486 | ddpB | +0.7 | 1.6 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b4598 | yncL | +0.7 | 2.0 | hypothetical protein (RefSeq) | compare |
| b1259 | yciG | +0.7 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2953 | yggU | +0.6 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b1823 | cspC | +0.6 | 2.4 | stress protein, member of the CspA-family (NCBI) | compare |
| b4647 | mokA | +0.6 | 0.8 | no description | compare |
| b3842 | rfaH | +0.6 | 4.4 | transcriptional activator RfaH (NCBI) | compare |
| b1591 | b1591 | +0.6 | 2.1 | putative oxidoreductase component (VIMSS) | compare |
| b2948 | yqgE | +0.6 | 3.2 | orf, hypothetical protein (VIMSS) | compare |
| b3643 | rph | +0.6 | 1.8 | ribonuclease PH (NCBI) | compare |
| b1095 | fabF | +0.6 | 4.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b1618 | uidR | +0.6 | 2.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3630 | rfaP | +0.6 | 5.1 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0759 | galE | +0.6 | 3.7 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b3627 | rfaI | +0.6 | 4.7 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b4294 | insA-7 | +0.6 | 2.3 | KpLE2 phage-like element; IS1 repressor protein InsA (NCBI) | compare |
| b2356 | yfdM | +0.6 | 1.0 | orf, hypothetical protein (VIMSS) | compare |
| b4589 | ylcI | +0.6 | 2.7 | hypothetical protein (RefSeq) | compare |
| b1150 | ymfR | +0.6 | 1.0 | e14 prophage; predicted protein (NCBI) | compare |
| b1685 | ydiH | +0.6 | 1.3 | predicted protein (RefSeq) | compare |
| b1656 | sodB | +0.6 | 2.7 | superoxide dismutase, Fe (NCBI) | compare |
| b1752 | ydjZ | +0.6 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b3620 | rfaF | +0.6 | 3.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b0178 | hlpA | +0.5 | 2.5 | periplasmic chaperone (NCBI) | compare |
| b2947 | gshB | +0.5 | 2.2 | glutathione synthetase (NCBI) | compare |
| b1961 | dcm | +0.5 | 1.0 | DNA cytosine methylase (NCBI) | compare |
| b3261 | fis | +0.5 | 1.8 | DNA-binding protein Fis (NCBI) | compare |
| b1382 | ynbE | +0.5 | 1.2 | predicted lipoprotein (NCBI) | compare |
| b4141 | yjeH | +0.5 | 4.2 | predicted transporter (NCBI) | compare |
| b1589 | ynfG | +0.5 | 1.9 | oxidoreductase, Fe-S subunit (NCBI) | compare |
| b0784 | moaD | +0.5 | 2.3 | molybdopterin synthase, small subunit (NCBI) | compare |
| b1818 | manY | +0.5 | 1.9 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b0051 | ksgA | +0.5 | 2.8 | dimethyladenosine transferase (NCBI) | compare |
| b2136 | yohD | +0.5 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3806 | cyaA | +0.5 | 2.9 | adenylate cyclase (NCBI) | compare |
| b0550 | rusA | +0.5 | 2.1 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b4369 | leuP | +0.5 | 1.3 | tRNA-Leu (NCBI) | compare |
| b0852 | rimK | +0.5 | 2.7 | ribosomal protein S6 modification protein (NCBI) | compare |
| b4453 | ldrD | +0.5 | 1.6 | toxic polypeptide, small (NCBI) | compare |
| b3889 | yiiE | +0.5 | 1.9 | predicted transcriptional regulator (RefSeq) | compare |
| b2990 | hybG | +0.5 | 0.9 | hydrogenase 2 accessory protein (NCBI) | compare |
| b1627 | rsxA | +0.5 | 2.0 | Na(+)-translocating NADH-quinone reductase subunit E (NCBI) | compare |
| b4000 | hupA | +0.5 | 2.4 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3119 | tdcR | +0.5 | 2.3 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b2804 | fucU | +0.5 | 1.8 | L-fucose mutarotase (NCBI) | compare |
| b2572 | rseA | +0.5 | 2.2 | anti-sigma factor (NCBI) | compare |
| b3632 | rfaQ | +0.5 | 4.3 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b1141 | ymfG | +0.5 | 1.9 | e14 prophage; predicted excisionase (NCBI) | compare |
| b2435 | amiA | +0.5 | 2.2 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b3979 | thrT | +0.4 | 0.4 | tRNA-Thr (NCBI) | compare |
| b3631 | rfaG | +0.4 | 4.1 | glucosyltransferase I (NCBI) | compare |
| b3928 | yiiU | +0.4 | 3.0 | hypothetical protein (NCBI) | compare |
| b1760 | ynjH | +0.4 | 2.6 | hypothetical protein (NCBI) | compare |
| b3264 | envR | +0.4 | 2.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3052 | rfaE | +0.4 | 2.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b4202 | rpsR | +0.4 | 1.0 | 30S ribosomal protein S18 (NCBI) | compare |
| b1634 | tppB | +0.4 | 2.6 | putative tripeptide transporter permease (NCBI) | compare |
| b4041 | plsB | +0.4 | 1.4 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b0503 | ybbB | +0.4 | 2.5 | tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) | compare |
| b1936 | intG | +0.4 | 0.6 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b1667 | ydhR | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b2910 | zapA | +0.4 | 2.5 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1855 | lpxM | +0.4 | 2.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b1613 | manA | +0.4 | 1.2 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b3068 | ygjF | +0.4 | 1.5 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b3658 | selC | +0.4 | 2.1 | tRNA-Sec (NCBI) | compare |
| b0751 | pnuC | +0.4 | 3.0 | predicted nicotinamide mononucleotide transporter (NCBI) | compare |
| b4701 | sokX | +0.4 | 0.4 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4012 | yjaB | +0.4 | 1.8 | predicted acetyltransferase (NCBI) | compare |
| b4461 | yfjD | +0.4 | 3.3 | predicted inner membrane protein (RefSeq) | compare |
| b1335 | ogt | +0.4 | 1.4 | O-6-alkylguanine-DNA:cysteine-protein methyltransferase (NCBI) | compare |
| b2111 | yehD | +0.4 | 1.9 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2494 | yfgC | +0.4 | 3.0 | predicted peptidase (NCBI) | compare |
| b1066 | rimJ | +0.4 | 2.4 | ribosomal-protein-S5-alanine N-acetyltransferase (NCBI) | compare |
| b2058 | wcaB | +0.4 | 0.8 | predicted acyl transferase (NCBI) | compare |
| b1160 | elbA | +0.4 | 0.6 | hypothetical protein (NCBI) | compare |
| b1394 | paaG | +0.4 | 1.3 | enoyl-CoA hydratase (NCBI) | compare |
| b3621 | rfaC | +0.4 | 2.7 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2939 | yqgB | +0.4 | 0.8 | predicted protein (RefSeq) | compare |
| b1802 | yeaW | +0.4 | 1.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b1633 | nth | +0.4 | 2.2 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b0926 | ycbK | +0.4 | 2.1 | hypothetical protein (NCBI) | compare |
| b3778 | rep | +0.4 | 2.8 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b3387 | dam | +0.4 | 3.2 | DNA adenine methylase (NCBI) | compare |
| b2421 | cysM | +0.4 | 1.6 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b1739 | osmE | +0.4 | 1.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b3181 | greA | +0.4 | 2.5 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b1789 | yeaL | +0.4 | 1.6 | conserved inner membrane protein (NCBI) | compare |
| b2038 | rfbC | +0.4 | 2.5 | dTDP-4-deoxyrhamnose-3,5-epimerase (NCBI) | compare |
| b1441 | ydcT | +0.4 | 1.5 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b1610 | tus | +0.4 | 2.3 | DNA replication terminus site-binding protein (NCBI) | compare |
| b3129 | sohA | +0.4 | 1.4 | predicted regulator (NCBI) | compare |
| b0949 | uup | +0.4 | 2.5 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4451 | ryhB | +0.4 | 0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b0623 | cspE | +0.4 | 1.0 | cold shock protein E (NCBI) | compare |
| b0661 | miaB | +0.4 | 3.0 | isopentenyl-adenosine A37 tRNA methylthiolase (NCBI) | compare |
| b1253 | yciA | +0.4 | 1.5 | predicted hydrolase (NCBI) | compare |
| b1640 | ydhH | +0.4 | 1.5 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b3350 | kefB | +0.4 | 3.3 | glutathione-regulated potassium-efflux system protein (NCBI) | compare |
| b3292 | zntR | +0.4 | 1.7 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b1380 | ldhA | +0.4 | 0.8 | D-lactate dehydrogenase (NCBI) | compare |
| b1976 | b1976 | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2684 | mprA | +0.3 | 2.0 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b1333 | uspE | +0.3 | 1.9 | stress-induced protein (NCBI) | compare |
| b1573 | ydfC | +0.3 | 0.8 | Qin prophage; predicted protein (RefSeq) | compare |
| b1914 | uvrY | +0.3 | 1.7 | response regulator (NCBI) | compare |
| b2003 | yeeT | +0.3 | 2.1 | CP4-44 prophage; predicted protein (NCBI) | compare |
| b2366 | dsdA | +0.3 | 1.6 | D-serine dehydratase (NCBI) | compare |
| b4056 | yjbQ | +0.3 | 2.5 | hypothetical protein (NCBI) | compare |
| b0882 | clpA | +0.3 | 2.8 | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) | compare |
| b1630 | rsxD | +0.3 | 1.8 | electron transport complex protein RnfD (NCBI) | compare |
| b1918 | yecS | +0.3 | 1.8 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4360 | yjjA | +0.3 | 1.2 | putative glycoprotein/receptor (VIMSS) | compare |
| b3890 | yiiF | +0.3 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1904 | yecR | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b3034 | nudF | +0.3 | 1.9 | ADP-ribose pyrophosphatase (NCBI) | compare |
| b1111 | ycfQ | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b0219 | yafV | +0.3 | 1.5 | predicted C-N hydrolase family amidase, NAD(P)-binding (NCBI) | compare |
| b0381 | ddlA | +0.3 | 2.5 | D-alanylalanine synthetase (NCBI) | compare |
| b1949 | fliQ | +0.3 | 1.3 | flagellar biosynthesis protein Q (NCBI) | compare |
| b4502 | yeiW | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b0615 | citF | +0.3 | 2.1 | citrate lyase, citrate-ACP transferase (alpha) subunit (NCBI) | compare |
| b3024 | ygiW | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b1013 | ycdC | +0.3 | 1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1891 | flhC | +0.3 | 1.1 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b2620 | smpB | +0.3 | 0.6 | SsrA-binding protein (NCBI) | compare |
| b1977 | asnT | +0.3 | 1.4 | tRNA-Asn (NCBI) | compare |
| b1423 | ydcJ | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b0190 | yaeQ | +0.3 | 2.2 | hypothetical protein (NCBI) | compare |
| b2618 | b2618 | +0.3 | 2.0 | orf, hypothetical protein (VIMSS) | compare |
| b0560 | nohB | +0.3 | 1.0 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1143 | ymfI | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4227 | ytfQ | +0.3 | 2.3 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b1147 | ymfL | +0.3 | 1.4 | e14 prophage; predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4698 | mgrR | +0.3 | 0.8 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1609 | rstB | +0.3 | 1.4 | sensory histidine kinase in two-component regulatory system with RstA (NCBI) | compare |
| b2314 | dedD | +0.3 | 1.4 | putative lipoprotein (VIMSS) | compare |
| b1629 | rsxC | +0.3 | 2.2 | electron transport complex protein RnfC (NCBI) | compare |
| b2531 | iscR | +0.3 | 0.6 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0955 | ycbZ | +0.3 | 2.5 | predicted peptidase (NCBI) | compare |
| b3033 | yqiB | +0.3 | 2.1 | predicted dehydrogenase (NCBI) | compare |
| b1478 | adhP | +0.3 | 2.0 | alcohol dehydrogenase (VIMSS) | compare |
| b4406 | yaeP | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b0502 | ylbG | +0.3 | 1.3 | no description | compare |
| b2099 | yegU | +0.3 | 1.7 | predicted hydrolase (NCBI) | compare |
| b2735 | ygbI | +0.3 | 1.7 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0677 | nagA | +0.3 | 1.9 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4376 | osmY | +0.3 | 2.4 | periplasmic protein (NCBI) | compare |
| b1461 | ydcE | +0.3 | 1.1 | 4-oxalocrotonate tautomerase (NCBI) | compare |
| b4676 | yoaK | +0.3 | 0.3 | expressed protein (RefSeq) | compare |
| b3929 | rraA | +0.3 | 2.1 | ribonuclease activity regulator protein RraA (NCBI) | compare |
| b3423 | glpR | +0.3 | 2.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2444 | yffM | +0.3 | 1.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1562 | hokD | +0.3 | 1.0 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b1621 | malX | +0.3 | 1.7 | fused maltose and glucose-specific PTS enzymes: IIB component -! IIC component (NCBI) | compare |
| b2141 | yohJ | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b1790 | yeaM | +0.3 | 1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2646 | ypjF | +0.3 | 1.1 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b4426 | isrA | +0.3 | 1.1 | unknown RNA (NCBI) | compare |
| b0234 | yafP | +0.3 | 0.7 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b1688 | ydiK | +0.3 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b3628 | rfaB | +0.3 | 2.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b4128 | yjdK | +0.3 | 0.3 | hypothetical protein (NCBI) | compare |
| b1406 | ydbC | +0.3 | 1.8 | predicted oxidoreductase, NAD(P)-binding (NCBI) | compare |
| b1548 | nohA | +0.3 | 0.6 | Qin prophage; predicted packaging protein (RefSeq) | compare |
| b0866 | ybjQ | +0.3 | 0.6 | hypothetical protein (NCBI) | compare |
| b3644 | yicC | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b0610 | rnk | +0.3 | 1.2 | nucleoside diphosphate kinase regulator (NCBI) | compare |
| b4093 | phnO | +0.3 | 1.0 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4135 | yjdC | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4384 | deoD | +0.3 | 2.2 | purine nucleoside phosphorylase (NCBI) | compare |
| b0247 | ykfG | +0.3 | 0.6 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b1540 | ydfH | +0.3 | 0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4620 | yjbT | +0.3 | 1.5 | hypothetical protein, no homologs (RefSeq) | compare |
| b0295 | ykgL | +0.3 | 1.7 | hypothetical protein (NCBI) | compare |
| b2082 | ogrK | +0.3 | 1.4 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b1794 | yeaP | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b3780 | rhlB | +0.3 | 2.2 | ATP-dependent RNA helicase (NCBI) | compare |
| b3443 | yrhA | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b0836 | yliH | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |