| | gene | name | fitness | t score | description | |
|---|
| b0437 | clpP | -8.1 | -5.6 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b3839 | tatC | -6.5 | -16.3 | TatABCE protein translocation system subunit (NCBI) | compare |
| b1192 | ldcA | -5.8 | -9.3 | L,D-carboxypeptidase A (NCBI) | compare |
| b3792 | wzxE | -5.4 | -6.5 | O-antigen translocase (NCBI) | compare |
| b4242 | mgtA | -5.2 | -7.2 | magnesium transporter (NCBI) | compare |
| b3405 | ompR | -5.0 | -12.1 | osmolarity response regulator (NCBI) | compare |
| b0957 | ompA | -5.0 | -7.5 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4702 | mgtL | -4.9 | -3.3 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3021 | ygiT | -4.8 | -4.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0740 | tolB | -4.8 | -8.5 | translocation protein TolB precursor (NCBI) | compare |
| b0149 | mrcB | -4.7 | -25.1 | penicillin-binding protein 1b (NCBI) | compare |
| b0739 | tolA | -4.7 | -6.4 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0438 | clpX | -4.7 | -12.5 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0737 | tolQ | -4.7 | -5.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2017 | yefM | -4.7 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | -4.6 | -3.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4042 | dgkA | -4.3 | -3.0 | diacylglycerol kinase (NCBI) | compare |
| b3791 | rffA | -4.3 | -15.3 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b2830 | nudH | -4.3 | -5.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3962 | udhA | -4.3 | -8.1 | putative oxidoreductase (VIMSS) | compare |
| b3390 | aroK | -4.2 | -4.7 | shikimate kinase I (NCBI) | compare |
| b4481 | rffT | -4.1 | -13.6 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b3790 | rffC | -4.1 | -10.5 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b2912 | ygfA | -4.1 | -8.0 | putative ligase (VIMSS) | compare |
| b3838 | tatB | -4.0 | -8.1 | sec-independent translocase (NCBI) | compare |
| b0741 | pal | -4.0 | -8.0 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b2318 | truA | -3.8 | -5.2 | tRNA pseudouridine synthase A (NCBI) | compare |
| b3035 | tolC | -3.8 | -11.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b4218 | ytfL | -3.8 | -15.5 | predicted inner membrane protein (NCBI) | compare |
| b3613 | yibP | -3.6 | -12.2 | putative membrane protein (VIMSS) | compare |
| b2312 | purF | -3.5 | -6.5 | amidophosphoribosyltransferase (NCBI) | compare |
| b0926 | ycbK | -3.5 | -9.0 | hypothetical protein (NCBI) | compare |
| b0222 | lpcA | -3.4 | -4.1 | phosphoheptose isomerase (NCBI) | compare |
| b4006 | purH | -3.4 | -16.5 | bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) | compare |
| b3609 | secB | -3.3 | -4.0 | export protein SecB (NCBI) | compare |
| b2188 | yejM | -3.3 | -13.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3619 | rfaD | -3.2 | -9.0 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3794 | rffM | -3.2 | -13.3 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b3082 | ygjM | -3.2 | -2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2808 | gcvA | -3.1 | -8.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4202 | rpsR | -3.0 | -2.9 | 30S ribosomal protein S18 (NCBI) | compare |
| b2476 | purC | -3.0 | -5.3 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b0523 | purE | -2.9 | -4.8 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b0912 | ihfB | -2.9 | -9.0 | integration host factor subunit beta (NCBI) | compare |
| b2499 | purM | -2.9 | -6.8 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b3150 | yraP | -2.9 | -11.5 | hypothetical protein (NCBI) | compare |
| b4179 | vacB | -2.9 | -10.9 | putative enzyme (VIMSS) | compare |
| b3341 | rpsG | -2.9 | -3.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b4005 | purD | -2.9 | -11.4 | phosphoribosylamine--glycine ligase (NCBI) | compare |
| b0890 | ftsK | -2.9 | -9.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3811 | xerC | -2.8 | -5.2 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1677 | lpp | -2.8 | -3.5 | murein lipoprotein (NCBI) | compare |
| b1712 | ihfA | -2.7 | -6.0 | integration host factor subunit alpha (NCBI) | compare |
| b0522 | purK | -2.7 | -9.9 | phosphoribosylaminoimidazole carboxylase (NCBI) | compare |
| b3786 | rffE | -2.6 | -16.8 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b3620 | rfaF | -2.6 | -10.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1823 | cspC | -2.6 | -3.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b3787 | rffD | -2.6 | -14.4 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b3784 | rfe | -2.6 | -17.7 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b3621 | rfaC | -2.6 | -10.6 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b4146 | yjeK | -2.5 | -4.4 | predicted lysine aminomutase (NCBI) | compare |
| b2557 | purL | -2.4 | -11.2 | phosphoribosylformylglycinamidine synthase (NCBI) | compare |
| b3706 | trmE | -2.4 | -10.3 | tRNA modification GTPase (NCBI) | compare |
| b0632 | dacA | -2.4 | -10.7 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b0688 | pgm | -2.3 | -6.3 | phosphoglucomutase (NCBI) | compare |
| b4414 | tff | -2.3 | -5.2 | unknown RNA (NCBI) | compare |
| b0033 | carB | -2.3 | -14.7 | carbamoyl-phosphate synthase large subunit (NCBI) | compare |
| b2567 | rnc | -2.3 | -1.5 | ribonuclease III (NCBI) | compare |
| b2894 | xerD | -2.2 | -3.0 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b2175 | spr | -2.2 | -7.2 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b2576 | srmB | -2.2 | -5.5 | ATP-dependent RNA helicase (NCBI) | compare |
| b0051 | ksgA | -2.2 | -6.8 | dimethyladenosine transferase (NCBI) | compare |
| b0049 | apaH | -2.2 | -4.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b3404 | envZ | -2.1 | -9.3 | osmolarity sensor protein (NCBI) | compare |
| b3052 | rfaE | -2.1 | -9.8 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1185 | dsbB | -2.1 | -5.0 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0630 | lipB | -2.1 | -2.7 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1236 | galU | -2.1 | -7.6 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b4203 | rplI | -2.0 | -8.9 | 50S ribosomal protein L9 (NCBI) | compare |
| b3726 | pstA | -2.0 | -7.2 | phosphate transporter subunit (NCBI) | compare |
| b3728 | pstS | -2.0 | -3.7 | phosphate transporter subunit (NCBI) | compare |
| b3741 | gidA | -2.0 | -6.2 | glucose-inhibited division protein A (NCBI) | compare |
| b1286 | rnb | -2.0 | -5.3 | exoribonuclease II (NCBI) | compare |
| b1861 | ruvA | -1.9 | -3.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b1129 | phoQ | -1.9 | -1.3 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b4593 | ymgI | -1.9 | -1.3 | hypothetical protein (RefSeq) | compare |
| b3642 | pyrE | -1.9 | -4.2 | orotate phosphoribosyltransferase (NCBI) | compare |
| b4701 | sokX | -1.9 | -1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b0032 | carA | -1.9 | -5.3 | carbamoyl-phosphate synthase small subunit (NCBI) | compare |
| b1830 | prc | -1.9 | -8.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3199 | yrbK | -1.9 | -2.9 | hypothetical protein (NCBI) | compare |
| b1130 | phoP | -1.9 | -1.3 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b0564 | appY | -1.8 | -0.8 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b4375 | prfC | -1.8 | -7.7 | peptide chain release factor 3 (NCBI) | compare |
| b3469 | zntA | -1.8 | -9.8 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0053 | surA | -1.8 | -8.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1831 | proQ | -1.8 | -5.6 | putative solute/DNA competence effector (NCBI) | compare |
| b2564 | pdxJ | -1.8 | -5.8 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b0114 | aceE | -1.8 | -2.3 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b4232 | fbp | -1.7 | -11.7 | fructose-1,6-bisphosphatase (NCBI) | compare |
| b4239 | treC | -1.7 | -3.3 | trehalose-6-P hydrolase (NCBI) | compare |
| b3725 | pstB | -1.7 | -1.1 | phosphate transporter subunit (NCBI) | compare |
| b4245 | pyrB | -1.6 | -9.5 | aspartate carbamoyltransferase catalytic subunit (NCBI) | compare |
| b1863 | ruvC | -1.6 | -3.4 | Holliday junction resolvase (NCBI) | compare |
| b3911 | cpxA | -1.6 | -8.8 | two-component sensor protein (NCBI) | compare |
| b3250 | mreC | -1.6 | -2.2 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4169 | amiB | -1.6 | -11.2 | N-acetylmuramoyl-l-alanine amidase II (NCBI) | compare |
| b2313 | cvpA | -1.6 | -5.8 | membrane protein required for colicin V production (NCBI) | compare |
| b3631 | rfaG | -1.5 | -13.0 | glucosyltransferase I (NCBI) | compare |
| b3183 | obgE | -1.5 | -2.4 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2330 | yfcB | -1.5 | -2.8 | putative adenine-specific methylase (VIMSS) | compare |
| b2501 | ppk | -1.5 | -9.6 | polyphosphate kinase (NCBI) | compare |
| b0400 | phoR | -1.5 | -9.3 | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | compare |
| b4651 | yibW | -1.5 | -1.0 | no description | compare |
| b0014 | dnaK | -1.5 | -2.8 | molecular chaperone DnaK (NCBI) | compare |
| b1860 | ruvB | -1.5 | -1.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b4402 | yjjY | -1.5 | -1.8 | hypothetical protein (NCBI) | compare |
| b3387 | dam | -1.5 | -11.6 | DNA adenine methylase (NCBI) | compare |
| b3164 | pnp | -1.5 | -4.3 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3229 | sspA | -1.5 | -3.9 | stringent starvation protein A (NCBI) | compare |
| b3727 | pstC | -1.5 | -8.7 | phosphate transporter subunit (NCBI) | compare |
| b0658 | ybeX | -1.5 | -1.0 | predicteed ion transport (NCBI) | compare |
| b1176 | minC | -1.4 | -4.5 | septum formation inhibitor (NCBI) | compare |
| b0232 | yafN | -1.4 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3860 | dsbA | -1.4 | -7.8 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b4172 | hfq | -1.4 | -1.3 | RNA-binding protein Hfq (NCBI) | compare |
| b2516 | yfgA | -1.4 | -5.1 | hypothetical protein (NCBI) | compare |
| b1438 | ydcQ | -1.4 | -2.0 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4698 | mgrR | -1.4 | -2.2 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1261 | trpB | -1.4 | -4.3 | tryptophan synthase subunit beta (NCBI) | compare |
| b2742 | nlpD | -1.4 | -8.9 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1105 | ycfM | -1.4 | -4.7 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3463 | ftsE | -1.4 | -1.3 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0200 | gmhB | -1.4 | -2.5 | hypothetical protein (NCBI) | compare |
| b1874 | cutC | -1.3 | -1.8 | copper homeostasis protein (NCBI) | compare |
| b4025 | pgi | -1.3 | -7.5 | glucose-6-phosphate isomerase (NCBI) | compare |
| b3630 | rfaP | -1.3 | -9.7 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3842 | rfaH | -1.3 | -6.3 | transcriptional activator RfaH (NCBI) | compare |
| b0949 | uup | -1.3 | -8.1 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2350 | yfdG | -1.3 | -4.8 | CPS-53 (KpLE1) prophage; bactoprenol-linked glucose translocase (flippase) (NCBI) | compare |
| b0726 | sucA | -1.3 | -4.7 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b0623 | cspE | -1.3 | -3.1 | cold shock protein E (NCBI) | compare |
| b1332 | ynaJ | -1.3 | -0.8 | predicted inner membrane protein (NCBI) | compare |
| b3940 | metL | -1.3 | -6.1 | bifunctional aspartate kinase II/homoserine dehydrogenase II (NCBI) | compare |
| b3292 | zntR | -1.3 | -3.4 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b3026 | qseC | -1.3 | -5.5 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0439 | lon | -1.2 | -5.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b4676 | yoaK | -1.2 | -0.8 | expressed protein (RefSeq) | compare |
| b4177 | purA | -1.2 | -1.4 | adenylosuccinate synthetase (NCBI) | compare |
| b3162 | deaD | -1.2 | -5.3 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b1095 | fabF | -1.2 | -6.0 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3426 | glpD | -1.2 | -4.2 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b4201 | priB | -1.2 | -3.0 | primosomal replication protein N (NCBI) | compare |
| b0226 | dinJ | -1.1 | -4.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1773 | ydjI | -1.1 | -2.7 | predicted aldolase (NCBI) | compare |
| b3472 | b3472 | -1.1 | -6.6 | orf, hypothetical protein (VIMSS) | compare |
| b3863 | polA | -1.1 | -1.5 | DNA polymerase I (NCBI) | compare |
| b3386 | rpe | -1.1 | -1.4 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b0605 | ahpC | -1.1 | -3.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b0945 | pyrD | -1.1 | -6.5 | dihydroorotate dehydrogenase (NCBI) | compare |
| b3375 | yhfR | -1.1 | -7.3 | putative transcriptional regulator (VIMSS) | compare |
| b2620 | smpB | -1.1 | -1.9 | SsrA-binding protein (NCBI) | compare |
| b0677 | nagA | -1.1 | -5.1 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b3388 | damX | -1.0 | -8.2 | hypothetical protein (NCBI) | compare |
| b3203 | yhbH | -1.0 | -4.7 | predicted ribosome-associated, sigma 54 modulation protein (NCBI) | compare |
| b1304 | pspA | -1.0 | -3.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3644 | yicC | -1.0 | -5.2 | hypothetical protein (NCBI) | compare |
| b2652 | ileY | -1.0 | -0.9 | tRNA-Ile (NCBI) | compare |
| b3290 | trkA | -1.0 | -2.5 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0814 | ompX | -1.0 | -4.5 | outer membrane protein X (NCBI) | compare |
| b2144 | sanA | -1.0 | -7.4 | hypothetical protein (NCBI) | compare |
| b1159 | mcrA | -1.0 | -1.3 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b3836 | b3836 | -1.0 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b1175 | minD | -1.0 | -4.7 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b3389 | aroB | -1.0 | -6.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b1855 | lpxM | -1.0 | -3.7 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0015 | dnaJ | -0.9 | -6.1 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b3238 | yhcN | -0.9 | -2.6 | orf, hypothetical protein (VIMSS) | compare |
| b3169 | nusA | -0.9 | -2.6 | transcription elongation factor NusA (NCBI) | compare |
| b0145 | dksA | -0.9 | -1.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b2683 | ygaH | -0.9 | -3.6 | predicted inner membrane protein (NCBI) | compare |
| b3650 | spoT | -0.9 | -4.7 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b3462 | ftsX | -0.9 | -5.0 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3545 | proK | -0.9 | -2.6 | tRNA-Pro (NCBI) | compare |
| b1730 | ydjO | -0.9 | -1.0 | predicted protein (RefSeq) | compare |
| b2320 | pdxB | -0.9 | -6.6 | erythronate-4-phosphate dehydrogenase (NCBI) | compare |
| b2741 | rpoS | -0.9 | -3.2 | RNA polymerase sigma factor (NCBI) | compare |
| b1062 | pyrC | -0.9 | -4.2 | dihydroorotase (NCBI) | compare |
| b0633 | rlpA | -0.9 | -6.8 | minor lipoprotein (NCBI) | compare |
| b3806 | cyaA | -0.9 | -4.2 | adenylate cyclase (NCBI) | compare |
| b2784 | relA | -0.9 | -5.8 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b0434 | yajG | -0.9 | -5.1 | putative polymerase/proteinase (VIMSS) | compare |
| b1824 | yobF | -0.9 | -1.4 | hypothetical protein (NCBI) | compare |
| b2569 | lepA | -0.8 | -3.9 | GTP-binding protein LepA (NCBI) | compare |
| b1850 | eda | -0.8 | -2.6 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0722 | sdhD | -0.8 | -3.2 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0889 | lrp | -0.8 | -2.0 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b0052 | pdxA | -0.8 | -5.6 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| b4533 | ynfO | -0.8 | -1.8 | Qin prophage; predicted protein (NCBI) | compare |
| b0059 | hepA | -0.8 | -6.8 | ATP-dependent helicase HepA (NCBI) | compare |