| | gene | name | fitness | t score | description | |
|---|
| PFR28_02823 | | -5.1 | -3.5 | 3-isopropylmalate dehydratase small subunit 1 | compare |
| PFR28_04932 | | -5.0 | -6.8 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | compare |
| PFR28_04986 | | -4.7 | -5.6 | Phosphoribosyl-AMP cyclohydrolase | compare |
| PFR28_04929 | | -4.6 | -5.5 | Histidine biosynthesis bifunctional protein HisB | compare |
| PFR28_02925 | | -4.5 | -10.5 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) | compare |
| PFR28_04933 | | -4.3 | -4.6 | Imidazole glycerol phosphate synthase subunit HisF | compare |
| PFR28_02928 | | -4.1 | -10.3 | 2-methylisocitrate lyase | compare |
| PFR28_02824 | | -4.0 | -8.8 | 3-isopropylmalate dehydratase large subunit | compare |
| PFR28_02603 | | -4.0 | -7.5 | Siroheme synthase | compare |
| PFR28_05016 | | -3.8 | -17.1 | Glutamate synthase [NADPH] small chain | compare |
| PFR28_02821 | | -3.8 | -19.7 | 3-isopropylmalate dehydrogenase | compare |
| PFR28_04278 | | -3.8 | -11.1 | Dihydroxy-acid dehydratase | compare |
| PFR28_04245 | | -3.7 | -16.6 | Homoserine O-succinyltransferase | compare |
| PFR28_05015 | | -3.7 | -24.5 | Glutamate synthase [NADPH] large chain | compare |
| PFR28_02924 | | -3.6 | -3.5 | 2-methyl-aconitate isomerase | compare |
| PFR28_03714 | | -3.6 | -15.1 | RNA polymerase-binding transcription factor DksA | compare |
| PFR28_02927 | | -3.5 | -14.7 | 2-methylcitrate synthase | compare |
| PFR28_01366 | | -3.5 | -10.4 | Sulfite reductase [ferredoxin] | compare |
| PFR28_00928 | | -3.5 | -3.3 | putative sugar transferase EpsL | compare |
| PFR28_05105 | | -3.4 | -6.9 | Phosphoserine phosphatase SerB2 | compare |
| PFR28_03363 | | -3.4 | -16.1 | Ornithine carbamoyltransferase 1, anabolic | compare |
| PFR28_00186 | | -3.4 | -6.8 | ATP phosphoribosyltransferase | compare |
| PFR28_04628 | | -3.4 | -2.3 | Thiol:disulfide interchange protein DsbA | compare |
| PFR28_04930 | | -3.3 | -9.4 | Imidazole glycerol phosphate synthase subunit HisH | compare |
| PFR28_02811 | | -3.2 | -4.3 | Amidophosphoribosyltransferase | compare |
| PFR28_02810 | | -3.1 | -13.9 | O-succinylhomoserine sulfhydrylase | compare |
| PFR28_03697 | | -3.0 | -13.8 | Ketol-acid reductoisomerase (NADP(+)) | compare |
| PFR28_05125 | | -3.0 | -10.9 | ATP phosphoribosyltransferase regulatory subunit | compare |
| PFR28_00187 | | -3.0 | -12.0 | Histidinol dehydrogenase | compare |
| PFR28_00305 | | -3.0 | -12.1 | 2-isopropylmalate synthase | compare |
| PFR28_00695 | | -3.0 | -2.8 | Sulfur carrier protein TusA | compare |
| PFR28_00098 | | -2.9 | -10.5 | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | compare |
| PFR28_00193 | | -2.9 | -12.0 | Sulfate adenylyltransferase subunit 2 | compare |
| PFR28_04202 | | -2.9 | -4.8 | 5,10-methylenetetrahydrofolate reductase | compare |
| PFR28_03860 | | -2.9 | -6.9 | putative murein peptide carboxypeptidase | compare |
| PFR28_04246 | | -2.8 | -11.9 | Bifunctional methionine biosynthesis protein MetXA/MetW | compare |
| PFR28_04888 | | -2.7 | -7.3 | hypothetical protein | conserved |
| PFR28_00427 | | -2.7 | -15.0 | RNA polymerase sigma factor RpoS | compare |
| PFR28_01092 | | -2.7 | -4.0 | Cbb3-type cytochrome c oxidase subunit CcoP1 | compare |
| PFR28_00966 | | -2.7 | -14.6 | HTH-type transcriptional regulator CysB | compare |
| PFR28_00241 | | -2.7 | -4.0 | Disulfide bond formation protein B | compare |
| PFR28_03463 | | -2.6 | -1.8 | hypothetical protein | compare |
| PFR28_03223 | | -2.6 | -8.0 | GTP pyrophosphokinase | compare |
| PFR28_04842 | | -2.6 | -7.1 | D-3-phosphoglycerate dehydrogenase | compare |
| PFR28_04832 | | -2.6 | -11.5 | putative phosphatase | compare |
| PFR28_03388 | | -2.5 | -12.1 | Quinolinate synthase A | compare |
| PFR28_03296 | | -2.5 | -1.9 | hypothetical protein | compare |
| PFR28_04985 | | -2.5 | -5.1 | Phosphoribosyl-ATP pyrophosphatase | compare |
| PFR28_04517 | | -2.4 | -12.4 | Oxaloacetate decarboxylase alpha chain | compare |
| PFR28_04992 | | -2.4 | -1.4 | hypothetical protein | compare |
| PFR28_04071 | | -2.4 | -1.7 | Multifunctional CCA protein | compare |
| PFR28_04519 | | -2.4 | -7.4 | HTH-type transcriptional activator CmpR | compare |
| PFR28_03721 | | -2.4 | -3.9 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | compare |
| PFR28_03387 | | -2.4 | -2.7 | hypothetical protein | compare |
| PFR28_00926 | | -2.4 | -2.3 | hypothetical protein | compare |
| PFR28_04030 | | -2.3 | -6.8 | hypothetical protein | compare |
| PFR28_04518 | | -2.3 | -11.3 | 2-oxoglutarate carboxylase small subunit | compare |
| PFR28_00478 | | -2.3 | -3.7 | Transcriptional regulatory protein DegU | compare |
| PFR28_05244 | | -2.3 | -12.3 | Copper-exporting P-type ATPase | compare |
| PFR28_04103 | | -2.3 | -7.9 | Biotin synthase | compare |
| PFR28_01365 | | -2.3 | -6.4 | hypothetical protein | compare |
| PFR28_04521 | | -2.3 | -5.8 | HTH-type transcriptional regulator HexR | compare |
| PFR28_04834 | | -2.3 | -13.5 | L-threonine dehydratase biosynthetic IlvA | compare |
| PFR28_03653 | | -2.2 | -3.3 | Molybdopterin-synthase adenylyltransferase | compare |
| PFR28_03716 | | -2.2 | -6.6 | hypothetical protein | compare |
| PFR28_04436 | | -2.2 | -7.8 | hypothetical protein | compare |
| PFR28_00188 | | -2.2 | -9.3 | Histidinol-phosphate aminotransferase | compare |
| PFR28_00176 | | -2.1 | -1.4 | Lipopolysaccharide export system protein LptC | compare |
| PFR28_00194 | | -2.1 | -8.8 | Bifunctional enzyme CysN/CysC | compare |
| PFR28_05139 | | -2.1 | -2.0 | hypothetical protein | compare |
| PFR28_00403 | | -2.1 | -3.9 | Regulator of sigma-E protease RseP | compare |
| PFR28_04308 | | -2.1 | -1.4 | Amino-acid acetyltransferase | compare |
| PFR28_03217 | | -2.0 | -1.4 | Phosphoribosylformylglycinamidine cyclo-ligase | compare |
| PFR28_03846 | | -2.0 | -6.9 | hypothetical protein | compare |
| PFR28_01084 | | -2.0 | -1.4 | hypothetical protein | compare |
| PFR28_03635 | | -2.0 | -4.1 | Malate:quinone oxidoreductase | compare |
| PFR28_03883 | | -2.0 | -7.5 | UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-2,6-diaminoheptandioate ligase | compare |
| PFR28_03189 | | -1.9 | -10.5 | Sensor histidine kinase RcsC | conserved |
| PFR28_03657 | | -1.9 | -5.2 | Beta-barrel assembly-enhancing protease | compare |
| PFR28_03282 | | -1.9 | -7.9 | Arginine N-succinyltransferase subunit alpha | compare |
| PFR28_01113 | | -1.9 | -3.7 | DNA topoisomerase 1 | compare |
| PFR28_01095 | | -1.9 | -6.7 | Cbb3-type cytochrome c oxidase subunit CcoN1 | compare |
| PFR28_04927 | | -1.9 | -2.4 | PanD regulatory factor | compare |
| PFR28_03413 | | -1.8 | -3.4 | Holliday junction ATP-dependent DNA helicase RuvA | compare |
| PFR28_01391 | | -1.8 | -2.0 | Peptidyl-prolyl cis-trans isomerase C | compare |
| PFR28_00927 | | -1.8 | -9.7 | D-inositol-3-phosphate glycosyltransferase | compare |
| PFR28_04100 | | -1.8 | -6.9 | Malonyl-[acyl-carrier protein] O-methyltransferase | compare |
| PFR28_03699 | | -1.8 | -3.2 | Acetolactate synthase isozyme 3 large subunit | compare |
| PFR28_00181 | | -1.8 | -7.7 | Intermembrane phospholipid transport system binding protein MlaD | compare |
| PFR28_01081 | | -1.7 | -1.2 | hypothetical protein | compare |
| PFR28_01094 | | -1.7 | -5.4 | hypothetical protein | compare |
| PFR28_00292 | | -1.7 | -3.0 | Protein IscX | compare |
| PFR28_04233 | | -1.7 | -3.5 | hypothetical protein | compare |
| PFR28_04485 | | -1.7 | -3.2 | Phosphate-specific transport system accessory protein PhoU | compare |
| PFR28_00873 | | -1.7 | -5.8 | hypothetical protein | compare |
| PFR28_04252 | | -1.7 | -6.6 | Thiazole synthase | compare |
| PFR28_00853 | | -1.7 | -7.3 | Chemotaxis protein CheY | compare |
| PFR28_04958 | | -1.7 | -1.6 | hypothetical protein | compare |
| PFR28_03420 | | -1.7 | -3.6 | hypothetical protein | compare |
| PFR28_03218 | | -1.7 | -5.3 | Phosphoribosylglycinamide formyltransferase | compare |
| PFR28_00918 | | -1.7 | -5.8 | UDP-N-acetylglucosamine 4,6-dehydratase (inverting) | compare |
| PFR28_04936 | | -1.7 | -3.7 | Carboxy-terminal processing protease CtpB | compare |
| PFR28_03612 | | -1.6 | -3.5 | Cell division protein ZapE | compare |
| PFR28_03289 | | -1.6 | -13.5 | Acetyl-coenzyme A synthetase | compare |
| PFR28_00180 | | -1.6 | -4.8 | Intermembrane phospholipid transport system permease protein MlaE | compare |
| PFR28_00828 | | -1.6 | -13.3 | Anaerobic nitric oxide reductase transcription regulator NorR | compare |
| PFR28_00561 | | -1.6 | -1.8 | Phosphogluconate dehydratase | compare |
| PFR28_00932 | | -1.6 | -12.8 | UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase | compare |
| PFR28_03856 | | -1.6 | -1.8 | LPS-assembly lipoprotein LptE | compare |
| PFR28_01110 | | -1.6 | -3.5 | Fatty acid oxidation complex subunit alpha | compare |
| PFR28_01572 | | -1.6 | -1.7 | hypothetical protein | compare |
| PFR28_05079 | | -1.6 | -6.0 | hypothetical protein | compare |
| PFR28_00861 | | -1.6 | -8.5 | Chemotaxis protein CheW | compare |
| PFR28_03843 | | -1.5 | -6.9 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | compare |
| PFR28_01080 | | -1.5 | -9.0 | Oxygen-independent coproporphyrinogen III oxidase | compare |
| PFR28_01139 | | -1.5 | -9.7 | Intermembrane phospholipid transport system lipoprotein MlaA | compare |
| PFR28_02613 | | -1.5 | -8.5 | ATP-dependent Clp protease ATP-binding subunit ClpA | compare |
| PFR28_00826 | | -1.5 | -7.3 | Flagellar secretion chaperone FliS | compare |
| PFR28_02083 | | -1.5 | -9.9 | Pesticin receptor | compare |
| PFR28_02009 | | -1.5 | -1.5 | HTH-type transcriptional regulator PgrR | compare |
| PFR28_01358 | | -1.5 | -2.1 | hypothetical protein | compare |
| PFR28_00930 | | -1.5 | -5.9 | GDP-perosamine synthase | compare |
| PFR28_00804 | | -1.5 | -7.4 | Flagellar basal-body rod protein FlgF | compare |
| PFR28_00810 | | -1.5 | -9.9 | hypothetical protein | compare |
| PFR28_04208 | | -1.5 | -5.0 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | compare |
| PFR28_04782 | | -1.5 | -9.1 | hypothetical protein | compare |
| PFR28_04998 | | -1.5 | -2.5 | ATP-dependent protease ATPase subunit HslU | compare |
| PFR28_04345 | | -1.5 | -11.7 | Polyphosphate kinase | compare |
| PFR28_03255 | | -1.5 | -7.8 | Chemotaxis protein methyltransferase Cher2 | compare |
| PFR28_01881 | | -1.5 | -2.8 | putative oxidoreductase | compare |
| PFR28_01777 | | -1.4 | -1.9 | putative trans-3-hydroxy-L-proline dehydratase | compare |
| PFR28_03844 | | -1.4 | -4.3 | Thiamine-phosphate synthase | compare |
| PFR28_00809 | | -1.4 | -10.4 | hypothetical protein | compare |
| PFR28_03169 | | -1.4 | -6.8 | Tail-specific protease | compare |
| PFR28_00855 | | -1.4 | -4.9 | hypothetical protein | compare |
| PFR28_04380 | | -1.4 | -2.0 | Transcriptional regulator SutA | compare |
| PFR28_03865 | | -1.4 | -6.4 | Endolytic peptidoglycan transglycosylase RlpA | compare |
| PFR28_04064 | | -1.4 | -3.1 | Ribosomal RNA small subunit methyltransferase A | compare |
| PFR28_01319 | | -1.4 | -8.0 | 1,4-alpha-glucan branching enzyme GlgB | compare |
| PFR28_00325 | | -1.4 | -3.8 | Inner membrane protein YpjD | compare |
| PFR28_00916 | | -1.4 | -7.6 | UDP-N-acetylglucosamine 2-epimerase | compare |
| PFR28_01142 | | -1.4 | -10.1 | Transaldolase | compare |
| PFR28_03627 | | -1.4 | -2.9 | SOS response-associated protein YedK | compare |
| PFR28_01313 | | -1.3 | -1.8 | hypothetical protein | compare |
| PFR28_00493 | | -1.3 | -4.3 | hypothetical protein | compare |
| PFR28_00851 | | -1.3 | -0.9 | Flagellum site-determining protein YlxH | compare |
| PFR28_00182 | | -1.3 | -6.1 | Intermembrane phospholipid transport system binding protein MlaC | compare |
| PFR28_03427 | | -1.3 | -5.7 | Sensor histidine kinase RcsC | compare |
| PFR28_03253 | | -1.3 | -8.9 | Flagellar basal-body rod protein FlgC | compare |
| PFR28_00917 | | -1.3 | -7.5 | UDP-N-acetyl-D-mannosamine dehydrogenase | compare |
| PFR28_04102 | | -1.3 | -6.3 | 8-amino-7-oxononanoate synthase | compare |
| PFR28_00825 | | -1.3 | -8.2 | B-type flagellar hook-associated protein 2 | compare |
| PFR28_01231 | | -1.3 | -2.4 | Peptidyl-prolyl cis-trans isomerase D | compare |
| PFR28_01773 | | -1.3 | -1.7 | hypothetical protein | compare |
| PFR28_01378 | | -1.3 | -3.5 | Magnesium-chelatase 38 kDa subunit | compare |
| PFR28_04072 | | -1.3 | -2.7 | Bifunctional folate synthesis protein | compare |
| PFR28_05006 | | -1.3 | -11.0 | Penicillin-binding protein 1A | compare |
| PFR28_00184 | | -1.3 | -3.2 | hypothetical protein | compare |
| PFR28_05212 | | -1.3 | -7.7 | Sensor histidine kinase RcsC | compare |
| PFR28_03130 | | -1.2 | -3.0 | Streptothricin hydrolase | compare |
| PFR28_03959 | | -1.2 | -5.8 | Outer membrane protein W | compare |
| PFR28_01917 | | -1.2 | -2.5 | Glutamine transport ATP-binding protein GlnQ | compare |
| PFR28_05091 | | -1.2 | -9.0 | Phosphomethylpyrimidine synthase | compare |
| PFR28_04069 | | -1.2 | -9.1 | hypothetical protein | compare |
| PFR28_04425 | | -1.2 | -7.2 | 2-iminobutanoate/2-iminopropanoate deaminase | compare |
| PFR28_03252 | | -1.2 | -7.2 | Basal-body rod modification protein FlgD | compare |
| PFR28_03414 | | -1.2 | -1.5 | Crossover junction endodeoxyribonuclease RuvC | compare |
| PFR28_00805 | | -1.2 | -5.3 | Flagellar basal-body rod protein FlgG | compare |
| PFR28_03412 | | -1.2 | -3.0 | Holliday junction ATP-dependent DNA helicase RuvB | compare |
| PFR28_03698 | | -1.2 | -5.3 | Acetolactate synthase isozyme 3 small subunit | compare |
| PFR28_03837 | | -1.2 | -5.3 | Leucine-responsive regulatory protein | compare |
| PFR28_00806 | | -1.2 | -7.5 | Flagellar L-ring protein | compare |
| PFR28_00159 | | -1.1 | -5.8 | hypothetical protein | compare |
| PFR28_01312 | | -1.1 | -1.6 | HTH-type transcriptional regulator NorG | compare |
| PFR28_03254 | | -1.1 | -6.3 | Flagellar basal body rod protein FlgB | compare |
| PFR28_00840 | | -1.1 | -6.7 | hypothetical protein | compare |
| PFR28_00277 | | -1.1 | -1.7 | Queuine tRNA-ribosyltransferase | compare |
| PFR28_02167 | | -1.1 | -2.1 | hypothetical protein | compare |
| PFR28_04423 | | -1.1 | -2.1 | DNA-directed RNA polymerase subunit omega | compare |
| PFR28_01930 | | -1.1 | -1.8 | HTH-type transcriptional regulator McbR | compare |
| PFR28_00823 | | -1.1 | -6.4 | Flagellin | compare |
| PFR28_05204 | | -1.1 | -2.1 | Sulfite reductase [ferredoxin] | compare |
| PFR28_00787 | | -1.1 | -2.0 | hypothetical protein | compare |
| PFR28_00808 | | -1.1 | -5.5 | hypothetical protein | compare |
| PFR28_02704 | | -1.1 | -1.1 | hypothetical protein | compare |
| PFR28_04262 | | -1.1 | -3.1 | Ribosomal RNA small subunit methyltransferase D | compare |
| PFR28_04941 | | -1.1 | -3.1 | Protein-export protein SecB | compare |
| PFR28_04939 | | -1.1 | -3.1 | putative protein YibN | compare |
| PFR28_00900 | | -1.1 | -3.8 | N-acetylmuramic acid 6-phosphate phosphatase | compare |
| PFR28_01156 | | -1.0 | -4.6 | hypothetical protein | compare |
| PFR28_02929 | | -1.0 | -2.7 | HTH-type transcriptional repressor GlaR | compare |
| PFR28_00924 | | -1.0 | -2.6 | hypothetical protein | compare |
| PFR28_03259 | | -1.0 | -1.3 | hypothetical protein | compare |
| PFR28_04418 | | -1.0 | -2.2 | Exodeoxyribonuclease | compare |
| PFR28_03012 | | -1.0 | -4.5 | Phosphate acyltransferase | compare |
| PFR28_03784 | | -1.0 | -4.7 | Energy-dependent translational throttle protein EttA | compare |
| PFR28_01109 | | -1.0 | -2.6 | hypothetical protein | compare |
| PFR28_00856 | | -1.0 | -4.3 | Protein-glutamate methylesterase/protein-glutamine glutaminase 1 | compare |
| PFR28_01435 | | -1.0 | -1.3 | Response regulator UvrY | compare |
| PFR28_02846 | | -1.0 | -3.8 | Adaptive-response sensory-kinase SasA | compare |