Experiment set4S835 for Escherichia coli HS(pFamp)R (ATCC 700891)

Compare to:

FrSangria 10E1

200 most important genes:

  gene name fitness t score description  
OHPLBJKB_01334 -3.6 -2.7 PTS system fructose-like EIIB component 1 compare
OHPLBJKB_02515 -3.5 -2.4 Septum site-determining protein MinC compare
OHPLBJKB_00074 -3.5 -2.4 hypothetical protein compare
OHPLBJKB_01622 -3.4 -1.9 hypothetical protein compare
OHPLBJKB_00078 -3.4 -2.3 O-antigen ligase compare
OHPLBJKB_02976 -3.2 -2.2 Protein TolQ compare
OHPLBJKB_01906 -3.0 -1.3 hypothetical protein compare
OHPLBJKB_00471 -3.0 -3.6 Inner membrane protein YhcB compare
OHPLBJKB_03017 -3.0 -1.6 Protein RhsC compare
OHPLBJKB_00161 -3.0 -0.9 tRNA-Pro compare
OHPLBJKB_02578 -2.9 -2.0 Large ribosomal RNA subunit accumulation protein YceD compare
OHPLBJKB_02990 -2.8 -1.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
OHPLBJKB_01660 -2.8 -4.3 dTDP-glucose 4,6-dehydratase 2 compare
OHPLBJKB_00077 -2.8 -3.8 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
OHPLBJKB_00591 -2.8 -1.2 hypothetical protein compare
OHPLBJKB_01863 -2.7 -3.2 Dihydroneopterin triphosphate diphosphatase compare
OHPLBJKB_00865 -2.7 -2.9 hypothetical protein compare
OHPLBJKB_04181 -2.6 -8.7 GTP-binding protein TypA/BipA compare
OHPLBJKB_00820 -2.6 -4.4 Flavodoxin 2 compare
OHPLBJKB_00299 -2.6 -5.2 Osmolarity sensor protein EnvZ compare
OHPLBJKB_00051 -2.6 -3.8 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
OHPLBJKB_03501 -2.5 -3.8 Periplasmic serine endoprotease DegP compare
OHPLBJKB_02636 -2.5 -2.9 hypothetical protein compare
OHPLBJKB_00089 -2.5 -1.8 Glutaredoxin 3 compare
OHPLBJKB_01228 -2.5 -5.0 Uracil phosphoribosyltransferase compare
OHPLBJKB_04213 -2.5 -4.4 Sec-independent protein translocase protein TatC compare
OHPLBJKB_04327 -2.4 -3.5 Phosphate transport system permease protein PstA compare
OHPLBJKB_01646 -2.4 -1.5 IS1 family transposase IS1X2 compare
OHPLBJKB_00278 -2.4 -5.1 Aerobic glycerol-3-phosphate dehydrogenase compare
OHPLBJKB_02557 -2.4 -1.6 NADH dehydrogenase compare
OHPLBJKB_04433 -2.4 -2.8 hypothetical protein compare
OHPLBJKB_03896 -2.4 -4.8 L-lysine 2,3-aminomutase compare
OHPLBJKB_02047 -2.4 -1.0 Major outer membrane prolipoprotein Lpp compare
OHPLBJKB_04098 -2.3 -3.2 Benzylsuccinate synthase activating enzyme compare
OHPLBJKB_03801 -2.3 -5.4 hypothetical protein compare
OHPLBJKB_02991 -2.3 -2.3 2-oxoglutarate dehydrogenase E1 component compare
OHPLBJKB_02614 -2.3 -3.5 hypothetical protein compare
OHPLBJKB_00092 -2.3 -2.2 Serine acetyltransferase compare
OHPLBJKB_02928 -2.3 -2.5 Molybdopterin synthase catalytic subunit compare
OHPLBJKB_04217 -2.3 -2.0 hypothetical protein compare
OHPLBJKB_01659 -2.2 -8.0 6-phosphogluconate dehydrogenase, decarboxylating compare
OHPLBJKB_02496 -2.2 -2.6 Murein tetrapeptide carboxypeptidase compare
OHPLBJKB_01429 -2.1 -2.9 NADH-quinone oxidoreductase subunit M compare
OHPLBJKB_00502 -2.1 -1.5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
OHPLBJKB_00071 -2.1 -1.4 Lipopolysaccharide core biosynthesis protein RfaG compare
OHPLBJKB_03497 -2.1 -1.4 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
OHPLBJKB_04273 -2.1 -0.9 Thioredoxin 1 compare
OHPLBJKB_01427 -2.1 -2.4 NADH-quinone oxidoreductase subunit K compare
OHPLBJKB_00818 -2.1 -1.5 FAD assembly factor SdhE compare
OHPLBJKB_04260 -2.0 -8.8 putative ECA polymerase compare
OHPLBJKB_03687 -2.0 -7.0 Peptide chain release factor RF3 compare
OHPLBJKB_03799 -2.0 -3.0 Soluble cytochrome b562 compare
OHPLBJKB_01864 -2.0 -2.7 putative transcriptional regulatory protein YebC compare
OHPLBJKB_04379 -2.0 -4.5 hypothetical protein compare
OHPLBJKB_04020 -2.0 -1.7 hypothetical protein compare
OHPLBJKB_04237 -2.0 -8.5 DNA helicase II compare
OHPLBJKB_03777 -2.0 -4.3 DNA polymerase III subunit chi compare
OHPLBJKB_04214 -2.0 -3.4 Sec-independent protein translocase protein TatB compare
OHPLBJKB_03129 -1.9 -2.4 hypothetical protein compare
OHPLBJKB_01425 -1.9 -1.3 NADH-quinone oxidoreductase subunit I compare
OHPLBJKB_01649 -1.9 -5.3 hypothetical protein compare
OHPLBJKB_00805 -1.9 -5.4 Cell division protein ZapA compare
OHPLBJKB_02040 -1.9 -1.8 Protein SufA compare
OHPLBJKB_00531 -1.9 -1.8 Transcription termination/antitermination protein NusA compare
OHPLBJKB_03214 -1.9 -1.6 Hemolysin expression-modulating protein Hha compare
OHPLBJKB_01967 -1.9 -1.6 Putative NAD(P)H nitroreductase YdjA compare
OHPLBJKB_01156 -1.9 -1.3 Serine hydroxymethyltransferase compare
OHPLBJKB_04088 -1.9 -1.8 Soluble pyridine nucleotide transhydrogenase compare
OHPLBJKB_02247 -1.9 -2.5 hypothetical protein compare
OHPLBJKB_02946 -1.8 -6.4 6-phosphogluconolactonase compare
OHPLBJKB_02484 -1.8 -1.2 Ribosome-binding ATPase YchF compare
OHPLBJKB_01138 -1.8 -3.4 Elongation factor 4 compare
OHPLBJKB_01583 -1.8 -1.0 hypothetical protein compare
OHPLBJKB_03811 -1.8 -5.0 Gamma-glutamylcyclotransferase family protein YtfP compare
OHPLBJKB_04276 -1.8 -1.2 ATP-dependent DNA helicase Rep compare
OHPLBJKB_02975 -1.8 -1.2 Protein TolR compare
OHPLBJKB_02482 -1.8 -2.7 hypothetical protein compare
OHPLBJKB_00298 -1.8 -2.7 Transcriptional regulatory protein OmpR compare
OHPLBJKB_02843 -1.8 -2.4 hypothetical protein compare
OHPLBJKB_01131 -1.8 -6.5 ATP-dependent RNA helicase SrmB compare
OHPLBJKB_01035 -1.8 -2.4 Protein RecA compare
OHPLBJKB_03954 -1.8 -2.4 Galactose-6-phosphate isomerase subunit LacA compare
OHPLBJKB_03675 -1.7 -4.4 Lipoate-protein ligase A compare
OHPLBJKB_04059 -1.7 -0.8 Sulfur carrier protein ThiS compare
OHPLBJKB_00072 -1.7 -2.3 Lipopolysaccharide core heptose(I) kinase RfaP compare
OHPLBJKB_01521 -1.7 -4.9 Inner membrane protein YejM compare
OHPLBJKB_01872 -1.7 -6.3 Murein DD-endopeptidase MepM compare
OHPLBJKB_00102 -1.7 -2.3 Mannitol-1-phosphate 5-dehydrogenase compare
OHPLBJKB_03116 -1.7 -1.6 Ferric enterobactin transport system permease protein FepD compare
OHPLBJKB_04004 -1.7 -1.2 Chorismate pyruvate-lyase compare
OHPLBJKB_02516 -1.7 -1.9 Septum site-determining protein MinD compare
OHPLBJKB_01376 -1.7 -3.2 Chorismate synthase compare
OHPLBJKB_00086 -1.7 -6.1 Murein hydrolase activator EnvC compare
OHPLBJKB_02580 -1.6 -6.2 Ribosomal large subunit pseudouridine synthase C compare
OHPLBJKB_00220 -1.6 -0.7 putative protein YbbC compare
OHPLBJKB_01616 -1.6 -1.6 PTS system galactitol-specific EIIA component compare
OHPLBJKB_04120 -1.6 -3.7 ATP-dependent protease ATPase subunit HslU compare
OHPLBJKB_04001 -1.6 -1.5 Diacylglycerol kinase compare
OHPLBJKB_03219 -1.6 -2.4 DNA base-flipping protein compare
OHPLBJKB_02930 -1.6 -3.6 Cyclic pyranopterin monophosphate synthase compare
OHPLBJKB_01260 -1.6 -2.8 Protein YffB compare
OHPLBJKB_02536 -1.6 -2.8 High frequency lysogenization protein HflD compare
OHPLBJKB_02562 -1.6 -1.0 hypothetical protein compare
OHPLBJKB_01822 -1.6 -5.2 Tyrosine-specific transport protein compare
OHPLBJKB_00498 -1.6 -1.1 RNA polymerase sigma-54 factor compare
OHPLBJKB_03885 -1.6 -3.0 Elongation factor P--(R)-beta-lysine ligase compare
OHPLBJKB_02101 -1.6 -3.7 OriC-binding nucleoid-associated protein compare
OHPLBJKB_00495 -1.6 -5.6 RNase adapter protein RapZ compare
OHPLBJKB_01419 -1.6 -4.0 NADH-quinone oxidoreductase subunit B compare
OHPLBJKB_00762 -1.6 -3.4 dITP/XTP pyrophosphatase compare
OHPLBJKB_03543 -1.5 -2.1 Aconitate hydratase B compare
OHPLBJKB_02267 -1.5 -1.4 putative protein YdcY compare
OHPLBJKB_03740 -1.5 -3.6 Anti-adapter protein IraD compare
OHPLBJKB_02103 -1.5 -2.7 Aminodeoxyfutalosine deaminase compare
OHPLBJKB_04373 -1.5 -1.3 Transposon Tn3 resolvase compare
OHPLBJKB_04060 -1.5 -1.9 Thiazole synthase compare
OHPLBJKB_02456 -1.5 -1.2 Respiratory nitrate reductase 1 gamma chain compare
OHPLBJKB_01654 -1.5 -2.0 hypothetical protein compare
OHPLBJKB_03241 -1.5 -5.7 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
OHPLBJKB_03244 -1.5 -1.6 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
OHPLBJKB_00536 -1.5 -5.1 Polyribonucleotide nucleotidyltransferase compare
OHPLBJKB_02099 -1.5 -1.6 Electron transport complex subunit RsxA compare
OHPLBJKB_04246 -1.5 -1.3 Iron-sulfur cluster assembly protein CyaY compare
OHPLBJKB_03686 -1.5 -1.5 Osmotically-inducible protein Y compare
OHPLBJKB_02760 -1.5 -4.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
OHPLBJKB_00316 -1.5 -2.0 DNA adenine methylase compare
OHPLBJKB_03796 -1.5 -1.4 Trehalose-6-phosphate hydrolase compare
OHPLBJKB_02779 -1.5 -4.5 Leucine-responsive regulatory protein compare
OHPLBJKB_04215 -1.5 -0.7 Sec-independent protein translocase protein TatA compare
OHPLBJKB_01049 -1.5 -3.9 Transcriptional repressor MprA compare
OHPLBJKB_01597 -1.5 -5.0 Iron-sulfur cluster carrier protein compare
OHPLBJKB_01555 -1.4 -7.5 Lysine-specific permease compare
OHPLBJKB_01380 -1.4 -2.5 hypothetical protein compare
OHPLBJKB_00830 -1.4 -1.4 Hydrogenase-4 component A compare
OHPLBJKB_03325 -1.4 -3.3 hypothetical protein compare
OHPLBJKB_00807 -1.4 -3.0 Xaa-Pro aminopeptidase compare
OHPLBJKB_00210 -1.4 -1.4 Low-affinity inorganic phosphate transporter 1 compare
OHPLBJKB_03032 -1.4 -1.0 Ferric uptake regulation protein compare
OHPLBJKB_00620 -1.4 -2.3 Antitoxin HigA compare
OHPLBJKB_00911 -1.4 -5.6 RecBCD enzyme subunit RecD compare
OHPLBJKB_02339 -1.4 -1.5 hypothetical protein compare
OHPLBJKB_02435 -1.4 -0.9 hypothetical protein compare
OHPLBJKB_03114 -1.4 -1.9 Ferrienterobactin-binding periplasmic protein compare
OHPLBJKB_01423 -1.4 -4.2 NADH-quinone oxidoreductase subunit G compare
OHPLBJKB_00722 -1.4 -2.9 Acyl carrier protein compare
OHPLBJKB_01428 -1.4 -3.5 NADH-quinone oxidoreductase subunit L compare
OHPLBJKB_03095 -1.3 -0.7 Regulator of nucleoside diphosphate kinase compare
OHPLBJKB_01907 -1.3 -0.7 Cold shock-like protein CspC compare
OHPLBJKB_04139 -1.3 -2.7 Sensor histidine kinase CpxA compare
OHPLBJKB_02836 -1.3 -2.9 hypothetical protein compare
OHPLBJKB_01877 -1.3 -3.0 Glucose-6-phosphate 1-dehydrogenase compare
OHPLBJKB_01696 -1.3 -2.3 Cytoskeleton-binding toxin CbtA compare
OHPLBJKB_02083 -1.3 -1.7 Transcriptional regulator SlyA compare
OHPLBJKB_00809 -1.3 -2.5 2-octaprenylphenol hydroxylase compare
OHPLBJKB_03038 -1.3 -5.0 N-acetylglucosamine-6-phosphate deacetylase compare
OHPLBJKB_00538 -1.3 -3.0 ATP-dependent RNA helicase DeaD compare
OHPLBJKB_03465 -1.3 -1.2 Outer membrane lipoprotein RcsF compare
OHPLBJKB_02296 -1.3 -1.7 hypothetical protein compare
OHPLBJKB_01650 -1.3 -1.0 putative low molecular weight protein-tyrosine-phosphatase AmsI compare
OHPLBJKB_02048 -1.3 -3.7 Pyruvate kinase I compare
OHPLBJKB_03122 -1.3 -3.5 Enterochelin esterase compare
OHPLBJKB_03074 -1.3 -5.0 D-alanyl-D-alanine carboxypeptidase DacA compare
OHPLBJKB_00496 -1.3 -2.1 Nitrogen regulatory protein compare
OHPLBJKB_00520 -1.3 -3.0 RNA-binding protein YhbY compare
OHPLBJKB_04445 -1.3 -6.3 hypothetical protein compare
OHPLBJKB_01756 -1.3 -0.7 Metal-binding protein ZinT compare
OHPLBJKB_02365 -1.3 -2.0 Beta-phosphoglucomutase compare
OHPLBJKB_00548 -1.3 -2.8 hypothetical protein compare
OHPLBJKB_03187 -1.3 -1.2 HTH-type transcriptional regulator CueR compare
OHPLBJKB_00856 -1.3 -1.7 Surface presentation of antigens protein SpaP compare
OHPLBJKB_00924 -1.3 -4.0 hypothetical protein compare
OHPLBJKB_00415 -1.3 -3.8 Ribosomal RNA small subunit methyltransferase B compare
OHPLBJKB_01702 -1.2 -1.6 hypothetical protein compare
OHPLBJKB_01287 -1.2 -2.9 N-acetylmuramoyl-L-alanine amidase AmiA compare
OHPLBJKB_03283 -1.2 -1.7 Pyrimidine/purine nucleoside phosphorylase compare
OHPLBJKB_04234 -1.2 -2.3 hypothetical protein compare
OHPLBJKB_02315 -1.2 -1.5 Acyl-coenzyme A thioesterase PaaI compare
OHPLBJKB_00516 -1.2 -4.7 putative inner membrane transporter YhbE compare
OHPLBJKB_03141 -1.2 -2.4 hypothetical protein compare
OHPLBJKB_04110 -1.2 -5.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
OHPLBJKB_00671 -1.2 -3.9 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 compare
OHPLBJKB_03863 -1.2 -5.8 Ribonuclease R compare
OHPLBJKB_03286 -1.2 -3.8 Shikimate kinase 2 compare
OHPLBJKB_03100 -1.2 -2.4 Alkyl hydroperoxide reductase C compare
OHPLBJKB_01790 -1.2 -1.8 Flagellar motor switch protein FliG compare
OHPLBJKB_02714 -1.2 -1.9 hypothetical protein compare
OHPLBJKB_00550 -1.2 -3.2 Osmotically-inducible protein Y compare
OHPLBJKB_02738 -1.2 -2.7 Aspartate aminotransferase compare
OHPLBJKB_01706 -1.2 -3.6 hypothetical protein compare
OHPLBJKB_03634 -1.2 -1.8 hypothetical protein compare
OHPLBJKB_00552 -1.2 -1.9 hypothetical protein compare
OHPLBJKB_01496 -1.2 -3.7 FAD:protein FMN transferase compare
OHPLBJKB_01826 -1.2 -1.9 hypothetical protein compare
OHPLBJKB_03607 -1.2 -3.0 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 compare
OHPLBJKB_04440 -1.2 -2.4 Transcriptional repressor PifC compare
OHPLBJKB_01430 -1.2 -2.4 NADH-quinone oxidoreductase subunit N compare
OHPLBJKB_00768 -1.2 -1.7 hypothetical protein compare
OHPLBJKB_03396 -1.2 -1.1 tRNA-Thr compare
OHPLBJKB_02538 -1.2 -4.1 Transcriptional regulatory protein PhoP compare
OHPLBJKB_02545 -1.2 -4.1 Spermidine/putrescine-binding periplasmic protein compare


Specific Phenotypes

For 2 genes in this experiment