Experiment set4S615 for Rhodanobacter sp. FW510-T8

Compare to:

R2A_PIPES with Metal_ion_mix_sitestressplate 2 x

200 most important genes:

  gene name fitness t score description  
OKGIIK_15735 23S_rrna -4.6 -3.2 23S ribosomal RNA compare
OKGIIK_11115 fiu -4.4 -3.0 Outer membrane receptor for monomeric catechols compare
OKGIIK_00755 pdhA -3.9 -2.7 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
OKGIIK_07310 -3.8 -8.0 Sodium/calcium exchanger protein compare
OKGIIK_05210 -3.7 -3.6 HigA family addiction module antitoxin compare
OKGIIK_13020 secB -3.6 -2.5 protein-export chaperone SecB compare
OKGIIK_03000 degQ -3.5 -7.9 peptidase S1 compare
OKGIIK_11110 ompR -3.5 -7.9 DNA-binding response regulator compare
OKGIIK_16565 mgtA -3.5 -5.3 magnesium-translocating P-type ATPase compare
OKGIIK_01155 cpsB -3.4 -4.0 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
OKGIIK_02315 purM -3.3 -2.3 phosphoribosylformylglycinamidine cyclo-ligase compare
OKGIIK_11075 gshB -3.3 -5.0 glutathione synthase compare
OKGIIK_16805 purH -3.2 -2.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OKGIIK_11415 ldcA -3.2 -2.2 muramoyltetrapeptide carboxypeptidase compare
OKGIIK_07870 rnc -3.1 -3.0 ribonuclease III compare
OKGIIK_13745 -3.1 -16.6 Type III secretion system lipoprotein chaperone (YscW) compare
OKGIIK_11390 pgpA -3.1 -5.1 Phosphatidylglycerophosphatase A compare
OKGIIK_02200 dmeF -3.1 -14.8 CDF family Co(II)/Ni(II) efflux transporter DmeF compare
OKGIIK_07900 rpoE -3.0 -7.3 RNA polymerase sigma factor RpoE compare
OKGIIK_00745 aceF -3.0 -3.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
OKGIIK_09995 yajC -3.0 -3.6 preprotein translocase subunit YajC compare
OKGIIK_14900 -3.0 -4.1 Membrane bound FAD containing D-sorbitol dehydrogenase compare
OKGIIK_03070 marC -3.0 -7.7 YhgN family NAAT transporter compare
OKGIIK_01190 -3.0 -2.9 Transport permease protein compare
OKGIIK_01195 -2.9 -4.4 ABC transporter, ATP-binding protein compare
OKGIIK_01240 -2.9 -5.5 EamA domain-containing protein compare
OKGIIK_10805 abrB -2.8 -2.6 AbrB family transcriptional regulator compare
OKGIIK_09410 lolD -2.8 -1.9 ABC-type lipoprotein export system, ATPase component compare
OKGIIK_15125 fbp -2.7 -13.2 class 1 fructose-bisphosphatase compare
OKGIIK_11105 baeS -2.7 -4.1 sensor histidine kinase compare
OKGIIK_06755 rnr -2.7 -12.2 ribonuclease R compare
OKGIIK_03645 htpX -2.7 -5.7 protease HtpX compare
OKGIIK_01845 kup -2.7 -3.7 potassium uptake protein compare
OKGIIK_15520 pgi -2.7 -6.4 glucose-6-phosphate isomerase compare
OKGIIK_06585 ompA -2.6 -9.7 flagellar motor protein MotB compare
OKGIIK_12965 -2.6 -7.0 glutamate--cysteine ligase compare
OKGIIK_00795 ycgM -2.6 -8.2 2-keto-4-pentenoate hydratase compare
OKGIIK_13855 -2.6 -3.1 Lipid A biosynthesis acyltransferase compare
OKGIIK_03430 -2.6 -7.1 N-acetylmuramoyl-L-alanine amidase compare
OKGIIK_01235 -2.6 -13.5 Glycosyl transferases group 1 compare
OKGIIK_16845 -2.6 -2.5 Protein-disulfide reductase compare
OKGIIK_02255 hprK -2.5 -10.4 HPr(Ser) kinase/phosphatase compare
OKGIIK_08010 -2.5 -10.4 Peptidylprolyl isomerase compare
OKGIIK_07300 -2.5 -2.9 carbamoyl phosphate synthase small subunit compare
OKGIIK_11845 -2.5 -13.9 Histidine kinase compare
OKGIIK_10175 rseP -2.5 -2.9 RIP metalloprotease RseP compare
OKGIIK_11370 -2.5 -5.0 Hemin transporter compare
OKGIIK_05955 tauE -2.5 -10.9 sulfite exporter TauE/SafE family protein compare
OKGIIK_01075 -2.5 -15.8 Energy transducer TonB compare
OKGIIK_07040 smc -2.5 -3.7 chromosome segregation protein SMC compare
OKGIIK_16060 gpmA -2.5 -5.4 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
OKGIIK_09575 ypjD -2.4 -7.4 Cytochrome C assembly protein compare
OKGIIK_01165 rfbC -2.4 -6.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
OKGIIK_07295 carB -2.4 -5.7 carbamoyl-phosphate synthase large subunit compare
OKGIIK_06275 -2.4 -3.2 Transcriptional regulator compare
OKGIIK_05630 elaC -2.4 -4.2 Ribonuclease BN, tRNA processing enzyme compare
OKGIIK_11505 purL -2.4 -3.9 phosphoribosylformylglycinamidine synthase compare
OKGIIK_09225 -2.3 -5.5 RecBCD enzyme subunit RecC compare
OKGIIK_16075 -2.3 -2.7 Peptidase C13 compare
OKGIIK_00110 ctpA -2.3 -6.2 C-terminal processing protease CtpA/Prc, contains a PDZ domain compare
OKGIIK_12705 pta -2.3 -4.6 NADP-dependent malic enzyme compare
OKGIIK_09230 -2.3 -4.1 RecBCD enzyme subunit RecB compare
OKGIIK_07245 -2.3 -7.5 Glycosyl transferase family 4 compare
OKGIIK_06470 typA -2.3 -3.3 translational GTPase TypA compare
OKGIIK_12440 djlA -2.3 -5.7 co-chaperone DjlA compare
OKGIIK_00095 ybeD -2.2 -3.0 DUF493 domain-containing protein compare
OKGIIK_15045 -2.2 -3.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
OKGIIK_09550 rplS -2.2 -2.4 50S ribosomal protein L19 compare
OKGIIK_01780 -2.2 -3.0 NAD+ synthase compare
OKGIIK_02260 raiA -2.2 -11.3 ribosomal subunit interface protein compare
OKGIIK_03310 minC -2.1 -2.0 septum site-determining protein MinC compare
OKGIIK_11330 lolD -2.1 -2.4 ABC transporter ATP-binding protein compare
OKGIIK_04805 aroC -2.0 -5.9 chorismate synthase compare
OKGIIK_01220 -2.0 -12.9 Phosphomannomutase compare
OKGIIK_01160 rfbD -2.0 -6.0 dTDP-4-dehydrorhamnose reductase compare
OKGIIK_01060 gap -2.0 -7.6 type I glyceraldehyde-3-phosphate dehydrogenase compare
OKGIIK_01080 fba1 -1.9 -10.9 fructose-bisphosphate aldolase class I compare
OKGIIK_09875 glpG -1.9 -12.2 DUF1751 domain-containing protein compare
OKGIIK_06640 hflK -1.9 -8.7 FtsH protease activity modulator HflK compare
OKGIIK_14150 -1.8 -12.6 Alpha/beta hydrolase compare
OKGIIK_12765 mtnN -1.8 -10.5 AMP nucleosidase compare
OKGIIK_14040 mnhC -1.8 -1.7 Na+/H+ antiporter subunit C compare
OKGIIK_14085 mtnX -1.8 -9.1 phosphatase compare
OKGIIK_10740 -1.8 -11.8 Prepilin-type N-terminal cleavage/methylation domain-containing protein compare
OKGIIK_10080 ihfA -1.8 -2.0 integration host factor subunit alpha compare
OKGIIK_07250 lapB -1.7 -9.4 lipopolysaccharide assembly protein LapB compare
OKGIIK_14180 -1.7 -4.2 DNA-binding response regulator compare
OKGIIK_01210 gmd -1.7 -11.1 GDP-mannose 4,6-dehydratase compare
OKGIIK_09020 adhE -1.7 -4.8 aldehyde dehydrogenase family protein compare
OKGIIK_04705 dcd -1.7 -9.7 dCTP deaminase compare
OKGIIK_01110 pgk -1.7 -5.6 phosphoglycerate kinase compare
OKGIIK_06870 hflD -1.6 -6.7 high frequency lysogenization protein HflD compare
OKGIIK_02360 pitA -1.6 -4.3 inorganic phosphate transporter compare
OKGIIK_14090 argD -1.6 -10.9 aspartate aminotransferase family protein compare
OKGIIK_11870 rimK -1.6 -6.0 30S ribosomal protein S6--L-glutamate ligase compare
OKGIIK_07430 secG -1.6 -5.3 preprotein translocase subunit SecG compare
OKGIIK_07885 -1.6 -8.6 Elongation factor 4 compare
OKGIIK_07290 greA -1.6 -5.7 transcription elongation factor GreA compare
OKGIIK_14940 -1.5 -4.5 undecaprenyl-diphosphate phosphatase compare
OKGIIK_07125 -1.5 -4.2 Ancillary SecYEG translocon subunit compare
OKGIIK_10760 -1.5 -9.0 hypothetical protein compare
OKGIIK_06645 hflC -1.5 -6.9 protease modulator HflC compare
OKGIIK_11495 -1.5 -6.4 Glycosyl transferase family 2 compare
OKGIIK_03335 -1.5 -11.2 Polyketide cyclase compare
OKGIIK_16815 -1.5 -3.2 DUF3426 domain-containing protein compare
OKGIIK_00990 -1.5 -2.4 TonB-dependent copper receptor compare
OKGIIK_11600 -1.5 -2.6 ATP:cob(I)alamin adenosyltransferase compare
OKGIIK_09780 -1.5 -3.2 Osmotically inducible protein OsmC compare
OKGIIK_14540 -1.5 -1.7 DUF2282 domain-containing protein compare
OKGIIK_05125 -1.5 -5.5 Mechanosensitive ion channel protein MscS compare
OKGIIK_16960 -1.5 -8.1 TetR family transcriptional regulator compare
OKGIIK_00415 -1.5 -1.9 hypothetical protein compare
OKGIIK_03865 -1.5 -2.1 ferredoxin compare
OKGIIK_13440 -1.5 -8.6 type I restriction-modification system subunit M compare
OKGIIK_02875 -1.4 -3.5 Flg-hook domain-containing protein compare
OKGIIK_01095 tkt -1.4 -6.3 transketolase compare
OKGIIK_07395 -1.4 -1.7 NfuA family Fe-S biogenesis protein compare
OKGIIK_15695 -1.4 -7.4 MFS transporter compare
OKGIIK_11965 mscL -1.4 -1.7 large-conductance mechanosensitive channel protein MscL compare
OKGIIK_06630 hfq -1.4 -5.5 RNA chaperone Hfq compare
OKGIIK_03065 yqjQ -1.4 -5.7 Short-chain dehydrogenase compare
OKGIIK_03320 -1.4 -4.4 GNAT family N-acetyltransferase compare
OKGIIK_03870 Glu_trna -1.4 -3.9 tRNA-Glu compare
OKGIIK_00090 -1.4 -1.6 serine-type D-Ala-D-Ala carboxypeptidase compare
OKGIIK_03895 panD -1.4 -4.4 aspartate 1-decarboxylase compare
OKGIIK_01475 -1.4 -3.6 Response regulatory domain-containing protein compare
OKGIIK_10765 -1.4 -10.7 HAD-IIIC family phosphatase compare
OKGIIK_14170 -1.4 -9.9 TolC family protein compare
OKGIIK_13570 thrC -1.3 -2.7 threonine synthase compare
OKGIIK_02245 manX -1.3 -6.8 PTS fructose IIA subunit family protein compare
OKGIIK_16440 -1.3 -3.7 Cytochrome C compare
OKGIIK_07375 smpB -1.3 -1.8 SsrA-binding protein SmpB compare
OKGIIK_13070 -1.3 -8.1 hypothetical protein compare
OKGIIK_13750 purD -1.3 -3.8 phosphoribosylamine--glycine ligase compare
OKGIIK_02250 rapZ -1.3 -6.8 RNase adapter RapZ compare
OKGIIK_07255 -1.3 -2.9 LapA-dom domain-containing protein compare
OKGIIK_06965 -1.3 -5.8 conjugal transfer protein TraB compare
OKGIIK_12065 -1.3 -10.1 Penicillin-binding protein 1A compare
OKGIIK_14165 lolE -1.3 -9.7 ABC transporter permease compare
OKGIIK_03790 phoB -1.3 -6.4 phosphate regulon transcriptional regulator PhoB compare
OKGIIK_10885 dgkA -1.3 -3.6 diacylglycerol kinase compare
OKGIIK_08935 -1.3 -2.7 hypothetical protein compare
OKGIIK_04150 -1.3 -3.3 Glucose-regulated metallo-peptidase M90 compare
OKGIIK_12130 mlaE -1.3 -4.2 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
OKGIIK_09380 -1.3 -6.1 FUSC-like domain-containing protein compare
OKGIIK_01390 -1.3 -6.4 Transcriptional regulator compare
OKGIIK_06270 cusA -1.2 -7.0 CusA/CzcA family heavy metal efflux RND transporter compare
OKGIIK_00995 -1.2 -2.9 DUF2946 domain-containing protein compare
OKGIIK_06555 ahpC -1.2 -4.2 alkyl hydroperoxide reductase subunit C compare
OKGIIK_01140 aF2118 -1.2 -9.3 cystathionine beta-synthase compare
OKGIIK_12075 -1.2 -3.5 citrate synthase compare
OKGIIK_03560 abcC -1.2 -2.9 methionine ABC transporter ATP-binding protein compare
OKGIIK_06265 -1.2 -6.1 Efflux RND transporter periplasmic adaptor subunit compare
OKGIIK_09515 gph -1.2 -4.6 phosphoglycolate phosphatase compare
OKGIIK_11030 -1.2 -8.2 P63C domain-containing protein compare
OKGIIK_10565 -1.2 -4.2 Ribosome-binding ATPase YchF compare
OKGIIK_08880 -1.2 -1.9 hypothetical protein compare
OKGIIK_01185 -1.2 -7.7 Glycosyl transferase compare
OKGIIK_06435 scpA -1.2 -3.7 Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family compare
OKGIIK_08650 -1.2 -3.4 hypothetical protein compare
OKGIIK_06260 -1.2 -6.3 TolC family protein compare
OKGIIK_07285 lysR -1.1 -7.6 LysR family transcriptional regulator compare
OKGIIK_01215 -1.1 -6.7 GDP-mannose 4,6 dehydratase compare
OKGIIK_03040 -1.1 -2.6 hypothetical protein compare
OKGIIK_10770 -1.1 -8.6 class I SAM-dependent methyltransferase compare
OKGIIK_12820 sYLF -1.1 -4.4 Las17-binding protein actin regulator compare
OKGIIK_08825 -1.1 -2.9 hypothetical protein compare
OKGIIK_12590 lpdA -1.1 -3.5 dihydrolipoyl dehydrogenase compare
OKGIIK_01175 rfbB -1.1 -6.5 dTDP-glucose 4,6-dehydratase compare
OKGIIK_08925 -1.1 -4.3 hypothetical protein compare
OKGIIK_10830 pulO -1.1 -4.1 prepilin peptidase compare
OKGIIK_08775 -1.1 -2.5 hypothetical protein compare
OKGIIK_02765 fliJ -1.1 -2.4 flagellar export protein FliJ compare
OKGIIK_01245 -1.1 -9.2 hypothetical protein compare
OKGIIK_13445 -1.1 -5.9 Restriction endonuclease subunit S compare
OKGIIK_12120 -1.1 -6.7 Toluene tolerance protein compare
OKGIIK_07400 -1.1 -0.5 4a-hydroxytetrahydrobiopterin dehydratase compare
OKGIIK_07655 ccoN -1.1 -5.1 cytochrome-c oxidase, cbb3-type subunit I compare
OKGIIK_05560 -1.1 -1.5 Sporulation protein compare
OKGIIK_10125 glnD -1.1 -1.9 [protein-PII] uridylyltransferase compare
OKGIIK_01180 metC -1.1 -6.9 cystathionine beta-lyase compare
OKGIIK_05615 -1.1 -3.2 DUF6165 domain-containing protein compare
OKGIIK_05840 rimP -1.1 -1.5 ribosome maturation protein RimP compare
OKGIIK_01170 rfbA -1.0 -5.5 glucose-1-phosphate thymidylyltransferase RfbA compare
OKGIIK_07660 ccoO -1.0 -2.6 cytochrome-c oxidase, cbb3-type subunit II compare
OKGIIK_16785 polA -1.0 -6.6 DNA polymerase I compare
OKGIIK_14155 -1.0 -3.7 Secretion protein HlyD compare
OKGIIK_11915 wecC -1.0 -6.9 Vi polysaccharide biosynthesis protein VipA/TviB compare
OKGIIK_16330 folK -1.0 -1.6 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase compare
OKGIIK_15325 xerC -1.0 -1.8 tyrosine recombinase XerC compare
OKGIIK_09590 rplI -1.0 -2.8 50S ribosomal protein L9 compare
OKGIIK_02320 -1.0 -6.0 DUF2066 domain-containing protein compare
OKGIIK_08045 tig -1.0 -4.0 trigger factor compare
OKGIIK_01125 -1.0 -3.6 DUF4398 domain-containing protein compare
OKGIIK_04485 -1.0 -3.1 hypothetical protein compare
OKGIIK_11255 yjjB -1.0 -3.2 Putative threonine/serine exporter compare
OKGIIK_10960 -1.0 -1.1 ABC transporter compare
OKGIIK_00270 -1.0 -3.1 Transcriptional regulator compare
OKGIIK_14175 -1.0 -7.5 Sensor protein QseC compare
OKGIIK_06580 prpD -1.0 -4.6 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare


Specific Phenotypes

For 2 genes in this experiment

For stress Metal_ion_mix_sitestressplate in Rhodanobacter sp. FW510-T8

For stress Metal_ion_mix_sitestressplate across organisms