Experiment set4S596 for Rhodanobacter sp. FW510-T8

Compare to:

R2A_PIPES with Cobalt chloride hexahydrate 512 uM

200 most important genes:

  gene name fitness t score description  
OKGIIK_02180 wcaG -4.6 -2.9 Nucleoside-diphosphate-sugar epimerase compare
OKGIIK_15735 23S_rrna -3.5 -2.4 23S ribosomal RNA compare
OKGIIK_11115 fiu -3.4 -2.3 Outer membrane receptor for monomeric catechols compare
OKGIIK_10540 tuf -3.3 -2.3 elongation factor Tu compare
OKGIIK_07680 -3.2 -2.2 ATPase P compare
OKGIIK_08705 -3.2 -2.2 hypothetical protein compare
OKGIIK_14155 -3.1 -3.0 Secretion protein HlyD compare
OKGIIK_14180 -3.0 -3.0 DNA-binding response regulator compare
OKGIIK_02200 dmeF -3.0 -4.2 CDF family Co(II)/Ni(II) efflux transporter DmeF compare
OKGIIK_05210 -3.0 -2.1 HigA family addiction module antitoxin compare
OKGIIK_09225 -3.0 -2.9 RecBCD enzyme subunit RecC compare
OKGIIK_11390 pgpA -2.9 -2.0 Phosphatidylglycerophosphatase A compare
OKGIIK_14150 -2.8 -6.8 Alpha/beta hydrolase compare
OKGIIK_01790 rluD -2.8 -2.7 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OKGIIK_14175 -2.8 -7.7 Sensor protein QseC compare
OKGIIK_11110 ompR -2.7 -5.6 DNA-binding response regulator compare
OKGIIK_00745 aceF -2.7 -1.9 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
OKGIIK_13745 -2.7 -9.0 Type III secretion system lipoprotein chaperone (YscW) compare
OKGIIK_05630 elaC -2.7 -1.8 Ribonuclease BN, tRNA processing enzyme compare
OKGIIK_14110 fabB -2.6 -5.1 3-oxoacyl-(acyl-carrier-protein) synthase compare
OKGIIK_13020 secB -2.6 -1.8 protein-export chaperone SecB compare
OKGIIK_06470 typA -2.6 -2.5 translational GTPase TypA compare
OKGIIK_14160 -2.6 -4.0 ABC transporter ATP-binding protein compare
OKGIIK_10960 -2.6 -1.8 ABC transporter compare
OKGIIK_05840 rimP -2.5 -1.7 ribosome maturation protein RimP compare
OKGIIK_09995 yajC -2.5 -1.7 preprotein translocase subunit YajC compare
OKGIIK_14165 lolE -2.5 -8.6 ABC transporter permease compare
OKGIIK_15125 fbp -2.5 -4.8 class 1 fructose-bisphosphatase compare
OKGIIK_05955 tauE -2.5 -6.3 sulfite exporter TauE/SafE family protein compare
OKGIIK_03000 degQ -2.5 -4.5 peptidase S1 compare
OKGIIK_00755 pdhA -2.5 -3.0 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha compare
OKGIIK_01165 rfbC -2.5 -2.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
OKGIIK_16565 mgtA -2.5 -3.4 magnesium-translocating P-type ATPase compare
OKGIIK_14090 argD -2.5 -9.3 aspartate aminotransferase family protein compare
OKGIIK_01155 cpsB -2.5 -2.4 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
OKGIIK_12765 mtnN -2.4 -6.9 AMP nucleosidase compare
OKGIIK_14085 mtnX -2.4 -5.8 phosphatase compare
OKGIIK_07250 lapB -2.4 -4.0 lipopolysaccharide assembly protein LapB compare
OKGIIK_07870 rnc -2.4 -1.6 ribonuclease III compare
OKGIIK_03070 marC -2.4 -3.9 YhgN family NAAT transporter compare
OKGIIK_01060 gap -2.3 -3.9 type I glyceraldehyde-3-phosphate dehydrogenase compare
OKGIIK_14170 -2.3 -9.2 TolC family protein compare
OKGIIK_03430 -2.3 -3.5 N-acetylmuramoyl-L-alanine amidase compare
OKGIIK_07900 rpoE -2.3 -4.1 RNA polymerase sigma factor RpoE compare
OKGIIK_01075 -2.3 -9.5 Energy transducer TonB compare
OKGIIK_08775 -2.3 -2.2 hypothetical protein compare
OKGIIK_13750 purD -2.3 -3.1 phosphoribosylamine--glycine ligase compare
OKGIIK_08010 -2.3 -5.7 Peptidylprolyl isomerase compare
OKGIIK_02315 purM -2.3 -1.6 phosphoribosylformylglycinamidine cyclo-ligase compare
OKGIIK_09550 rplS -2.3 -1.6 50S ribosomal protein L19 compare
OKGIIK_03645 htpX -2.3 -3.4 protease HtpX compare
OKGIIK_07395 -2.3 -1.5 NfuA family Fe-S biogenesis protein compare
OKGIIK_10175 rseP -2.2 -1.5 RIP metalloprotease RseP compare
OKGIIK_04705 dcd -2.2 -5.4 dCTP deaminase compare
OKGIIK_16060 gpmA -2.2 -3.0 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
OKGIIK_13570 thrC -2.2 -2.1 threonine synthase compare
OKGIIK_08500 -2.2 -1.9 Cell wall hydrolase compare
OKGIIK_01160 rfbD -2.2 -3.3 dTDP-4-dehydrorhamnose reductase compare
OKGIIK_07375 smpB -2.2 -1.5 SsrA-binding protein SmpB compare
OKGIIK_07400 -2.2 -1.0 4a-hydroxytetrahydrobiopterin dehydratase compare
OKGIIK_16805 purH -2.2 -1.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OKGIIK_16845 -2.2 -1.4 Protein-disulfide reductase compare
OKGIIK_00990 -2.2 -1.5 TonB-dependent copper receptor compare
OKGIIK_01190 -2.2 -1.5 Transport permease protein compare
OKGIIK_01220 -2.2 -7.0 Phosphomannomutase compare
OKGIIK_06755 rnr -2.1 -5.0 ribonuclease R compare
OKGIIK_08045 tig -2.1 -4.0 trigger factor compare
OKGIIK_01845 kup -2.1 -2.0 potassium uptake protein compare
OKGIIK_09020 adhE -2.1 -2.5 aldehyde dehydrogenase family protein compare
OKGIIK_13440 -2.1 -6.8 type I restriction-modification system subunit M compare
OKGIIK_11105 baeS -2.1 -2.0 sensor histidine kinase compare
OKGIIK_11250 hns -2.0 -1.4 histidine biosynthesis protein compare
OKGIIK_01240 -2.0 -3.1 EamA domain-containing protein compare
OKGIIK_13625 ubiA -2.0 -1.1 4-hydroxybenzoate octaprenyltransferase compare
OKGIIK_05570 purF -2.0 -3.1 amidophosphoribosyltransferase compare
OKGIIK_15045 -2.0 -1.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
OKGIIK_12705 pta -2.0 -2.4 NADP-dependent malic enzyme compare
OKGIIK_07300 -2.0 -1.4 carbamoyl phosphate synthase small subunit compare
OKGIIK_15520 pgi -2.0 -3.3 glucose-6-phosphate isomerase compare
OKGIIK_03865 -2.0 -1.4 ferredoxin compare
OKGIIK_11415 ldcA -1.9 -3.0 muramoyltetrapeptide carboxypeptidase compare
OKGIIK_02070 -1.9 -3.9 hypothetical protein compare
OKGIIK_13070 -1.9 -7.8 hypothetical protein compare
OKGIIK_11445 ettA -1.9 -1.9 energy-dependent translational throttle protein EttA compare
OKGIIK_09230 -1.9 -2.6 RecBCD enzyme subunit RecB compare
OKGIIK_16440 -1.9 -4.8 Cytochrome C compare
OKGIIK_03295 -1.9 -2.2 hypothetical protein compare
OKGIIK_07125 -1.9 -3.4 Ancillary SecYEG translocon subunit compare
OKGIIK_01080 fba1 -1.9 -6.8 fructose-bisphosphate aldolase class I compare
OKGIIK_01175 rfbB -1.9 -6.8 dTDP-glucose 4,6-dehydratase compare
OKGIIK_13280 -1.9 -2.9 Acyltransferase compare
OKGIIK_16330 folK -1.9 -2.5 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase compare
OKGIIK_03560 abcC -1.9 -3.1 methionine ABC transporter ATP-binding protein compare
OKGIIK_06555 ahpC -1.9 -3.1 alkyl hydroperoxide reductase subunit C compare
OKGIIK_01235 -1.9 -8.4 Glycosyl transferases group 1 compare
OKGIIK_14025 mnhF -1.9 -2.5 K+/H+ antiporter subunit F compare
OKGIIK_06920 aroA -1.9 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
OKGIIK_07285 lysR -1.9 -7.2 LysR family transcriptional regulator compare
OKGIIK_09590 rplI -1.9 -2.8 50S ribosomal protein L9 compare
OKGIIK_00995 -1.9 -2.5 DUF2946 domain-containing protein compare
OKGIIK_09875 glpG -1.8 -7.5 DUF1751 domain-containing protein compare
OKGIIK_03795 -1.8 -9.9 Putative beta-barrel assembly-enhancing protease compare
OKGIIK_07295 carB -1.8 -2.8 carbamoyl-phosphate synthase large subunit compare
OKGIIK_16785 polA -1.8 -7.5 DNA polymerase I compare
OKGIIK_01140 aF2118 -1.8 -9.8 cystathionine beta-synthase compare
OKGIIK_03305 minD -1.8 -1.7 septum site-determining protein MinD compare
OKGIIK_09190 -1.8 -6.8 Methionine synthase compare
OKGIIK_12590 lpdA -1.8 -3.0 dihydrolipoyl dehydrogenase compare
OKGIIK_06645 hflC -1.8 -4.7 protease modulator HflC compare
OKGIIK_06585 ompA -1.8 -5.7 flagellar motor protein MotB compare
OKGIIK_01195 -1.8 -2.9 ABC transporter, ATP-binding protein compare
OKGIIK_12270 crp -1.8 -9.4 cAMP-activated global transcriptional regulator CRP compare
OKGIIK_14940 -1.8 -3.4 undecaprenyl-diphosphate phosphatase compare
OKGIIK_07885 -1.8 -6.1 Elongation factor 4 compare
OKGIIK_07040 smc -1.8 -2.6 chromosome segregation protein SMC compare
OKGIIK_00825 -1.8 -6.7 Cytochrome B compare
OKGIIK_01570 -1.7 -1.7 NrdH-redoxin compare
OKGIIK_02870 -1.7 -2.6 Flagellar biosynthesis protein compare
OKGIIK_00110 ctpA -1.7 -3.4 C-terminal processing protease CtpA/Prc, contains a PDZ domain compare
OKGIIK_00415 -1.7 -1.9 hypothetical protein compare
OKGIIK_06870 hflD -1.7 -4.4 high frequency lysogenization protein HflD compare
OKGIIK_02360 pitA -1.7 -2.6 inorganic phosphate transporter compare
OKGIIK_11065 ompR -1.7 -2.3 two-component system response regulator compare
OKGIIK_10080 ihfA -1.7 -1.2 integration host factor subunit alpha compare
OKGIIK_12095 ridA -1.7 -6.6 reactive intermediate/imine deaminase compare
OKGIIK_03320 -1.7 -3.4 GNAT family N-acetyltransferase compare
OKGIIK_05950 roxA -1.7 -2.5 transcription factor compare
OKGIIK_07430 secG -1.6 -3.8 preprotein translocase subunit SecG compare
OKGIIK_09410 lolD -1.6 -1.7 ABC-type lipoprotein export system, ATPase component compare
OKGIIK_13445 -1.6 -7.2 Restriction endonuclease subunit S compare
OKGIIK_11100 -1.6 -6.1 hypothetical protein compare
OKGIIK_09325 -1.6 -2.0 Enoyl-CoA hydratase compare
OKGIIK_02260 raiA -1.6 -7.2 ribosomal subunit interface protein compare
OKGIIK_15390 xth -1.6 -4.7 exodeoxyribonuclease III compare
OKGIIK_13420 -1.6 -2.0 DUF45 domain-containing protein compare
OKGIIK_15325 xerC -1.6 -1.8 tyrosine recombinase XerC compare
OKGIIK_02155 hrpA -1.6 -8.5 ATP-dependent RNA helicase HrpA conserved
OKGIIK_01210 gmd -1.6 -7.7 GDP-mannose 4,6-dehydratase compare
OKGIIK_09515 gph -1.6 -3.7 phosphoglycolate phosphatase compare
OKGIIK_06640 hflK -1.5 -5.4 FtsH protease activity modulator HflK compare
OKGIIK_05625 -1.5 -4.1 3-deoxy-D-manno-octulosonic acid kinase compare
OKGIIK_02355 ykaA -1.5 -6.0 pit accessory protein conserved
OKGIIK_11050 -1.5 -9.4 Histidine kinase compare
OKGIIK_15705 -1.5 -4.5 anhydro-N-acetylmuramic acid kinase compare
OKGIIK_03895 panD -1.5 -3.6 aspartate 1-decarboxylase compare
OKGIIK_01110 pgk -1.5 -3.5 phosphoglycerate kinase compare
OKGIIK_01170 rfbA -1.5 -5.3 glucose-1-phosphate thymidylyltransferase RfbA compare
OKGIIK_09185 metH1 -1.5 -4.6 5-methyltetrahydrofolate--homocysteine methyltransferase compare
OKGIIK_07245 -1.5 -4.3 Glycosyl transferase family 4 compare
OKGIIK_01180 metC -1.5 -6.7 cystathionine beta-lyase compare
OKGIIK_12965 -1.5 -4.1 glutamate--cysteine ligase compare
OKGIIK_01215 -1.4 -5.1 GDP-mannose 4,6 dehydratase compare
OKGIIK_04805 aroC -1.4 -3.4 chorismate synthase compare
OKGIIK_01245 -1.4 -10.2 hypothetical protein compare
OKGIIK_03550 nlpA -1.4 -4.4 methionine ABC transporter substrate-binding protein compare
OKGIIK_08770 -1.4 -3.1 hypothetical protein compare
OKGIIK_09780 -1.4 -2.8 Osmotically inducible protein OsmC compare
OKGIIK_03555 metP -1.4 -4.1 metal ABC transporter permease compare
OKGIIK_06630 hfq -1.4 -3.8 RNA chaperone Hfq compare
OKGIIK_16815 -1.4 -2.6 DUF3426 domain-containing protein compare
OKGIIK_06635 hflX -1.4 -8.7 GTPase HflX conserved
OKGIIK_01310 gcvH -1.4 -2.2 glycine cleavage system protein GcvH compare
OKGIIK_01255 fixB -1.4 -6.2 electron transfer flavoprotein subunit alpha compare
OKGIIK_11740 -1.4 -6.9 LppC putative lipoprotein compare
OKGIIK_07255 -1.3 -2.3 LapA-dom domain-containing protein compare
OKGIIK_11030 -1.3 -7.0 P63C domain-containing protein compare
OKGIIK_06435 scpA -1.3 -2.6 Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family compare
OKGIIK_15165 -1.3 -1.6 hypothetical protein compare
OKGIIK_06145 merE -1.3 -1.7 broad-spectrum mercury transporter MerE compare
OKGIIK_09370 fabG -1.3 -2.3 3-hydroxyacyl-CoA dehydrogenase compare
OKGIIK_09575 ypjD -1.3 -3.9 Cytochrome C assembly protein compare
OKGIIK_10125 glnD -1.3 -1.8 [protein-PII] uridylyltransferase compare
OKGIIK_01390 -1.3 -5.8 Transcriptional regulator compare
OKGIIK_11495 -1.3 -3.7 Glycosyl transferase family 2 compare
OKGIIK_12205 -1.2 -1.4 hypothetical protein compare
OKGIIK_16630 -1.2 -4.2 hypothetical protein compare
OKGIIK_06275 -1.2 -1.8 Transcriptional regulator compare
OKGIIK_03770 -1.2 -2.3 Peptidyl-prolyl cis-trans isomerase compare
OKGIIK_01780 -1.2 -1.7 NAD+ synthase compare
OKGIIK_04060 bepA -1.2 -4.7 peptidase compare
OKGIIK_16435 -1.2 -7.0 Protein-disulfide isomerase compare
OKGIIK_04120 -1.2 -1.8 DNA-binding protein compare
OKGIIK_12440 djlA -1.2 -3.2 co-chaperone DjlA compare
OKGIIK_11505 purL -1.2 -2.4 phosphoribosylformylglycinamidine synthase compare
OKGIIK_15310 -1.2 -6.4 hypothetical protein compare
OKGIIK_05070 -1.2 -4.1 Barnase inhibitor compare
OKGIIK_02805 fliR -1.2 -2.9 flagellar biosynthetic protein FliR compare
OKGIIK_11520 xerD -1.2 -2.9 site-specific tyrosine recombinase XerD compare
OKGIIK_03310 minC -1.2 -1.1 septum site-determining protein MinC compare
OKGIIK_11595 -1.2 -6.1 Membrane protein compare
OKGIIK_14045 -1.1 -7.3 Cation:proton antiporter compare
OKGIIK_07240 flaA1 -1.1 -5.3 polysaccharide biosynthesis protein compare
OKGIIK_13195 -1.1 -5.9 Aminotransferase compare
OKGIIK_15490 -1.1 -7.7 DUF481 domain-containing protein conserved
OKGIIK_12065 -1.1 -7.6 Penicillin-binding protein 1A compare
OKGIIK_01250 -1.1 -8.4 UbiA family prenyltransferase compare
OKGIIK_02965 phoH -1.1 -5.3 Phosphate starvation-inducible protein PhoH, putative ATPase conserved
OKGIIK_12820 sYLF -1.1 -3.3 Las17-binding protein actin regulator compare
OKGIIK_07660 ccoO -1.1 -2.4 cytochrome-c oxidase, cbb3-type subunit II compare
OKGIIK_07290 greA -1.1 -3.3 transcription elongation factor GreA compare


Specific Phenotypes

For 5 genes in this experiment

For stress Cobalt chloride hexahydrate in Rhodanobacter sp. FW510-T8

For stress Cobalt chloride hexahydrate across organisms