| | gene | name | fitness | t score | description | |
|---|
| PFR28_04933 | | -6.2 | -4.3 | Imidazole glycerol phosphate synthase subunit HisF | compare |
| PFR28_02444 | | -5.2 | -4.2 | Leucine-responsive regulatory protein | compare |
| PFR28_02823 | | -5.2 | -3.5 | 3-isopropylmalate dehydratase small subunit 1 | compare |
| PFR28_01884 | | -5.1 | -6.3 | putative enoyl-CoA hydratase echA8 | compare |
| PFR28_02448 | | -5.1 | -8.5 | Dihydrolipoyl dehydrogenase | compare |
| PFR28_02447 | | -5.0 | -10.7 | Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex | compare |
| PFR28_02824 | | -4.9 | -8.2 | 3-isopropylmalate dehydratase large subunit | compare |
| PFR28_01878 | | -4.7 | -9.5 | putative HTH-type transcriptional regulator | conserved |
| PFR28_02925 | | -4.7 | -8.9 | 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) | compare |
| PFR28_01882 | | -4.6 | -8.8 | Acetyl-CoA acetyltransferase | conserved |
| PFR28_04071 | | -4.6 | -2.0 | Multifunctional CCA protein | compare |
| PFR28_02924 | | -4.5 | -3.1 | 2-methyl-aconitate isomerase | compare |
| PFR28_02445 | | -4.5 | -12.6 | 2-oxoisovalerate dehydrogenase subunit alpha | compare |
| PFR28_02821 | | -4.4 | -19.8 | 3-isopropylmalate dehydrogenase | compare |
| PFR28_04932 | | -4.4 | -7.9 | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase | compare |
| PFR28_04986 | | -4.4 | -6.7 | Phosphoribosyl-AMP cyclohydrolase | compare |
| PFR28_04930 | | -4.2 | -10.5 | Imidazole glycerol phosphate synthase subunit HisH | compare |
| PFR28_03363 | | -4.1 | -17.5 | Ornithine carbamoyltransferase 1, anabolic | compare |
| PFR28_02446 | | -4.1 | -16.8 | 2-oxoisovalerate dehydrogenase subunit beta | compare |
| PFR28_00186 | | -4.0 | -8.1 | ATP phosphoribosyltransferase | compare |
| PFR28_02927 | | -4.0 | -14.2 | 2-methylcitrate synthase | compare |
| PFR28_02928 | | -3.9 | -10.7 | 2-methylisocitrate lyase | compare |
| PFR28_04929 | | -3.9 | -7.0 | Histidine biosynthesis bifunctional protein HisB | compare |
| PFR28_02449 | | -3.9 | -14.9 | putative branched-chain-amino-acid aminotransferase | compare |
| PFR28_01881 | | -3.8 | -3.7 | putative oxidoreductase | compare |
| PFR28_05125 | | -3.8 | -9.3 | ATP phosphoribosyltransferase regulatory subunit | compare |
| PFR28_00305 | | -3.7 | -14.3 | 2-isopropylmalate synthase | compare |
| PFR28_04902 | | -3.6 | -6.0 | Inner membrane protein YgaZ | compare |
| PFR28_04246 | | -3.5 | -13.3 | Bifunctional methionine biosynthesis protein MetXA/MetW | compare |
| PFR28_03714 | | -3.5 | -15.2 | RNA polymerase-binding transcription factor DksA | compare |
| PFR28_01883 | | -3.5 | -7.9 | Acyl-CoA dehydrogenase | conserved |
| PFR28_03837 | | -3.4 | -9.7 | Leucine-responsive regulatory protein | compare |
| PFR28_04245 | | -3.4 | -16.8 | Homoserine O-succinyltransferase | compare |
| PFR28_03697 | | -3.4 | -14.2 | Ketol-acid reductoisomerase (NADP(+)) | compare |
| PFR28_05105 | | -3.3 | -7.7 | Phosphoserine phosphatase SerB2 | compare |
| PFR28_02811 | | -3.3 | -3.2 | Amidophosphoribosyltransferase | compare |
| PFR28_04628 | | -3.3 | -2.3 | Thiol:disulfide interchange protein DsbA | compare |
| PFR28_03721 | | -3.3 | -3.2 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | compare |
| PFR28_00187 | | -3.3 | -12.1 | Histidinol dehydrogenase | compare |
| PFR28_04832 | | -3.1 | -12.5 | putative phosphatase | compare |
| PFR28_04202 | | -3.0 | -3.6 | 5,10-methylenetetrahydrofolate reductase | compare |
| PFR28_04518 | | -3.0 | -11.6 | 2-oxoglutarate carboxylase small subunit | compare |
| PFR28_04278 | | -3.0 | -10.8 | Dihydroxy-acid dehydratase | compare |
| PFR28_01366 | | -2.9 | -9.9 | Sulfite reductase [ferredoxin] | compare |
| PFR28_02810 | | -2.9 | -15.7 | O-succinylhomoserine sulfhydrylase | compare |
| PFR28_04903 | | -2.9 | -6.9 | hypothetical protein | compare |
| PFR28_03635 | | -2.9 | -2.0 | Malate:quinone oxidoreductase | compare |
| PFR28_03860 | | -2.9 | -4.8 | putative murein peptide carboxypeptidase | compare |
| PFR28_04985 | | -2.8 | -5.0 | Phosphoribosyl-ATP pyrophosphatase | compare |
| PFR28_02603 | | -2.8 | -8.0 | Siroheme synthase | compare |
| PFR28_03427 | | -2.8 | -7.7 | Sensor histidine kinase RcsC | compare |
| PFR28_04517 | | -2.8 | -13.9 | Oxaloacetate decarboxylase alpha chain | compare |
| PFR28_00098 | | -2.8 | -10.0 | Nicotinate-nucleotide pyrophosphorylase [carboxylating] | compare |
| PFR28_04030 | | -2.7 | -6.0 | hypothetical protein | compare |
| PFR28_04519 | | -2.7 | -11.1 | HTH-type transcriptional activator CmpR | compare |
| PFR28_01880 | | -2.6 | -8.3 | Acetyl-coenzyme A synthetase | conserved |
| PFR28_03844 | | -2.6 | -7.1 | Thiamine-phosphate synthase | compare |
| PFR28_01877 | | -2.6 | -11.3 | CDP-diacylglycerol--serine O-phosphatidyltransferase | compare |
| PFR28_01014 | | -2.5 | -2.7 | Pyrimidine/purine nucleoside phosphorylase | compare |
| PFR28_04491 | | -2.5 | -6.2 | putative acyl-CoA thioester hydrolase | compare |
| PFR28_03223 | | -2.5 | -9.0 | GTP pyrophosphokinase | compare |
| PFR28_03388 | | -2.4 | -13.3 | Quinolinate synthase A | compare |
| PFR28_03218 | | -2.4 | -7.3 | Phosphoribosylglycinamide formyltransferase | compare |
| PFR28_01365 | | -2.4 | -6.6 | hypothetical protein | compare |
| PFR28_00188 | | -2.4 | -10.6 | Histidinol-phosphate aminotransferase | compare |
| PFR28_04110 | | -2.3 | -14.0 | Malate synthase G | compare |
| PFR28_03130 | | -2.3 | -4.0 | Streptothricin hydrolase | compare |
| PFR28_04842 | | -2.2 | -6.4 | D-3-phosphoglycerate dehydrogenase | compare |
| PFR28_03856 | | -2.1 | -1.4 | LPS-assembly lipoprotein LptE | compare |
| PFR28_01930 | | -2.1 | -3.0 | HTH-type transcriptional regulator McbR | compare |
| PFR28_04308 | | -2.0 | -1.4 | Amino-acid acetyltransferase | compare |
| PFR28_03699 | | -2.0 | -2.6 | Acetolactate synthase isozyme 3 large subunit | compare |
| PFR28_03653 | | -1.9 | -3.7 | Molybdopterin-synthase adenylyltransferase | compare |
| PFR28_04252 | | -1.9 | -8.9 | Thiazole synthase | compare |
| PFR28_04521 | | -1.9 | -4.5 | HTH-type transcriptional regulator HexR | compare |
| PFR28_01376 | | -1.9 | -2.3 | hypothetical protein | compare |
| PFR28_00787 | | -1.9 | -3.2 | hypothetical protein | compare |
| PFR28_02719 | | -1.8 | -3.0 | Integration host factor subunit alpha | compare |
| PFR28_04565 | | -1.8 | -10.9 | Protein RarD | compare |
| PFR28_00688 | | -1.8 | -1.7 | hypothetical protein | compare |
| PFR28_03217 | | -1.8 | -1.7 | Phosphoribosylformylglycinamidine cyclo-ligase | compare |
| PFR28_05091 | | -1.8 | -12.8 | Phosphomethylpyrimidine synthase | compare |
| PFR28_03698 | | -1.8 | -7.7 | Acetolactate synthase isozyme 3 small subunit | compare |
| PFR28_04072 | | -1.8 | -3.3 | Bifunctional folate synthesis protein | compare |
| PFR28_03369 | | -1.8 | -8.6 | Glycerol-3-phosphate regulon repressor | compare |
| PFR28_01081 | | -1.7 | -1.2 | hypothetical protein | compare |
| PFR28_00403 | | -1.7 | -3.5 | Regulator of sigma-E protease RseP | compare |
| PFR28_00926 | | -1.7 | -2.2 | hypothetical protein | compare |
| PFR28_02973 | | -1.7 | -12.8 | HTH-type transcriptional regulator NorG | conserved |
| PFR28_03420 | | -1.7 | -4.4 | hypothetical protein | compare |
| PFR28_00837 | | -1.7 | -5.3 | hypothetical protein | compare |
| PFR28_03843 | | -1.6 | -6.3 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | compare |
| PFR28_00241 | | -1.6 | -3.3 | Disulfide bond formation protein B | compare |
| PFR28_00966 | | -1.6 | -10.7 | HTH-type transcriptional regulator CysB | compare |
| PFR28_00980 | | -1.6 | -1.7 | ATP-dependent RNA helicase DeaD | compare |
| PFR28_03463 | | -1.6 | -1.6 | hypothetical protein | compare |
| PFR28_04103 | | -1.5 | -6.7 | Biotin synthase | compare |
| PFR28_04936 | | -1.5 | -3.3 | Carboxy-terminal processing protease CtpB | compare |
| PFR28_04887 | | -1.5 | -2.9 | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | compare |
| PFR28_04380 | | -1.4 | -2.0 | Transcriptional regulator SutA | compare |
| PFR28_02740 | | -1.4 | -2.7 | hypothetical protein | compare |
| PFR28_03413 | | -1.4 | -3.0 | Holliday junction ATP-dependent DNA helicase RuvA | compare |
| PFR28_00913 | | -1.4 | -6.1 | Integration host factor subunit beta | compare |
| PFR28_05212 | | -1.4 | -7.8 | Sensor histidine kinase RcsC | compare |
| PFR28_00695 | | -1.4 | -2.0 | Sulfur carrier protein TusA | compare |
| PFR28_03657 | | -1.4 | -4.8 | Beta-barrel assembly-enhancing protease | compare |
| PFR28_01691 | | -1.3 | -3.2 | hypothetical protein | compare |
| PFR28_02838 | | -1.3 | -8.5 | Aromatic-amino-acid aminotransferase | compare |
| PFR28_00541 | | -1.3 | -1.8 | hypothetical protein | compare |
| PFR28_00325 | | -1.3 | -2.6 | Inner membrane protein YpjD | compare |
| PFR28_04325 | | -1.3 | -4.0 | 5-formyltetrahydrofolate cyclo-ligase | compare |
| PFR28_03282 | | -1.3 | -6.5 | Arginine N-succinyltransferase subunit alpha | compare |
| PFR28_01080 | | -1.3 | -8.3 | Oxygen-independent coproporphyrinogen III oxidase | compare |
| PFR28_05201 | | -1.3 | -3.4 | Precorrin-6Y C(5,15)-methyltransferase [decarboxylating] | compare |
| PFR28_04436 | | -1.3 | -5.6 | hypothetical protein | compare |
| PFR28_03429 | | -1.2 | -4.3 | Thiamine-phosphate synthase | compare |
| PFR28_00271 | | -1.2 | -3.0 | hypothetical protein | compare |
| PFR28_01378 | | -1.2 | -2.9 | Magnesium-chelatase 38 kDa subunit | compare |
| PFR28_00572 | | -1.1 | -6.3 | HTH-type transcriptional regulator HexR | compare |
| PFR28_00561 | | -1.1 | -1.7 | Phosphogluconate dehydratase | compare |
| PFR28_04782 | | -1.1 | -7.8 | hypothetical protein | compare |
| PFR28_04345 | | -1.1 | -9.5 | Polyphosphate kinase | compare |
| PFR28_00442 | | -1.1 | -3.9 | hypothetical protein | compare |
| PFR28_01003 | | -1.1 | -3.0 | hypothetical protein | compare |
| PFR28_00722 | | -1.1 | -2.7 | hypothetical protein | compare |
| PFR28_03255 | | -1.1 | -7.3 | Chemotaxis protein methyltransferase Cher2 | compare |
| PFR28_01113 | | -1.1 | -2.6 | DNA topoisomerase 1 | compare |
| PFR28_01718 | | -1.1 | -2.4 | Response regulator receiver protein CpdR | compare |
| PFR28_01602 | | -1.0 | -8.6 | NAD-specific glutamate dehydrogenase | compare |
| PFR28_01408 | | -1.0 | -1.5 | hypothetical protein | compare |
| PFR28_00851 | | -1.0 | -0.9 | Flagellum site-determining protein YlxH | compare |
| PFR28_02283 | | -1.0 | -2.0 | hypothetical protein | compare |
| PFR28_00159 | | -1.0 | -5.2 | hypothetical protein | compare |
| PFR28_01037 | | -1.0 | -5.6 | Phosphoenolpyruvate synthase regulatory protein | compare |
| PFR28_03631 | | -1.0 | -1.2 | hypothetical protein | compare |
| PFR28_01855 | | -1.0 | -1.0 | Hypoxic response protein 1 | compare |
| PFR28_00855 | | -0.9 | -5.3 | hypothetical protein | compare |
| PFR28_03902 | | -0.9 | -1.0 | hypothetical protein | compare |
| PFR28_03412 | | -0.9 | -2.6 | Holliday junction ATP-dependent DNA helicase RuvB | compare |
| PFR28_00690 | | -0.9 | -3.5 | RNA polymerase sigma-H factor | compare |
| PFR28_01156 | | -0.9 | -4.5 | hypothetical protein | compare |
| PFR28_00622 | | -0.9 | -1.6 | Beta-ketoadipyl-CoA thiolase | compare |
| PFR28_01230 | | -0.9 | -1.6 | Lon protease | compare |
| PFR28_00853 | | -0.9 | -5.2 | Chemotaxis protein CheY | compare |
| PFR28_04941 | | -0.9 | -2.7 | Protein-export protein SecB | compare |
| PFR28_04052 | | -0.9 | -7.2 | hypothetical protein | compare |
| PFR28_05079 | | -0.9 | -4.0 | hypothetical protein | compare |
| PFR28_01095 | | -0.9 | -4.0 | Cbb3-type cytochrome c oxidase subunit CcoN1 | compare |
| PFR28_00139 | | -0.9 | -4.7 | HTH-type transcriptional regulator LutR | compare |
| PFR28_01084 | | -0.9 | -1.7 | hypothetical protein | compare |
| PFR28_03865 | | -0.9 | -4.5 | Endolytic peptidoglycan transglycosylase RlpA | compare |
| PFR28_01142 | | -0.9 | -6.8 | Transaldolase | compare |
| PFR28_01587 | | -0.9 | -2.0 | hypothetical protein | compare |
| PFR28_04230 | | -0.9 | -3.3 | Response regulator PleD | compare |
| PFR28_02298 | | -0.9 | -1.3 | hypothetical protein | compare |
| PFR28_01600 | | -0.8 | -1.7 | HTH-type transcriptional regulator KdgR | compare |
| PFR28_04059 | | -0.8 | -5.9 | N-acetylmuramate alpha-1-phosphate uridylyltransferase | compare |
| PFR28_01470 | | -0.8 | -1.7 | Transcriptional regulatory protein WalR | compare |
| PFR28_01431 | | -0.8 | -1.2 | Chemotaxis protein CheW | compare |
| PFR28_03414 | | -0.8 | -1.3 | Crossover junction endodeoxyribonuclease RuvC | compare |
| PFR28_03931 | | -0.8 | -2.1 | hypothetical protein | compare |
| PFR28_03229 | | -0.8 | -3.3 | hypothetical protein | compare |
| PFR28_01190 | | -0.8 | -0.9 | hypothetical protein | compare |
| PFR28_00861 | | -0.8 | -5.9 | Chemotaxis protein CheW | compare |
| PFR28_01231 | | -0.8 | -1.9 | Peptidyl-prolyl cis-trans isomerase D | compare |
| PFR28_01094 | | -0.8 | -2.8 | hypothetical protein | compare |
| PFR28_04585 | | -0.8 | -2.9 | Chromosome partitioning protein ParA | compare |
| PFR28_03362 | | -0.8 | -1.6 | hypothetical protein | compare |
| PFR28_04607 | | -0.8 | -1.2 | Organic hydroperoxide resistance protein OhrB | compare |
| PFR28_01570 | | -0.8 | -2.8 | 'Bis(5'-nucleosyl)-tetraphosphatase, symmetrical' transl_table=11 | compare |
| PFR28_02734 | | -0.8 | -2.9 | Ribose operon repressor | compare |
| PFR28_04723 | | -0.7 | -5.8 | NAD(P) transhydrogenase subunit beta | compare |
| PFR28_00208 | | -0.7 | -3.4 | Dihydromonapterin reductase | compare |
| PFR28_02050 | | -0.7 | -2.7 | hypothetical protein | compare |
| PFR28_02817 | | -0.7 | -2.7 | tRNA pseudouridine synthase A | compare |
| PFR28_01375 | | -0.7 | -1.7 | hypothetical protein | compare |
| PFR28_01845 | | -0.7 | -2.5 | Cysteine/O-acetylserine efflux protein | compare |
| PFR28_01176 | | -0.7 | -2.0 | hypothetical protein | compare |
| PFR28_01410 | | -0.7 | -4.1 | Response regulator GacA | compare |
| PFR28_02344 | | -0.7 | -3.7 | Chaperone protein HscC | compare |
| PFR28_01153 | | -0.7 | -0.8 | hypothetical protein | compare |
| PFR28_03507 | | -0.7 | -2.4 | Protein YrdA | compare |
| PFR28_02846 | | -0.7 | -3.5 | Adaptive-response sensory-kinase SasA | compare |
| PFR28_02210 | | -0.7 | -1.2 | cAMP-activated global transcriptional regulator CRP | compare |
| PFR28_00274 | | -0.7 | -1.8 | hypothetical protein | compare |
| PFR28_00299 | | -0.7 | -1.1 | hypothetical protein | compare |
| PFR28_03227 | | -0.7 | -4.2 | Signal transduction histidine-protein kinase BarA | compare |
| PFR28_04119 | | -0.7 | -2.5 | putative GST-like protein YibF | compare |
| PFR28_03666 | | -0.7 | -0.8 | hypothetical protein | compare |
| PFR28_01450 | | -0.7 | -1.1 | hypothetical protein | compare |
| PFR28_01386 | | -0.7 | -1.8 | Glutamine transport ATP-binding protein GlnQ | compare |
| PFR28_00941 | | -0.7 | -0.8 | Potassium-transporting ATPase KdpC subunit | compare |
| PFR28_00340 | | -0.7 | -2.7 | NADPH dehydrogenase | compare |
| PFR28_04958 | | -0.7 | -1.1 | hypothetical protein | compare |
| PFR28_04056 | | -0.7 | -4.3 | Membrane-bound lytic murein transglycosylase F | compare |
| PFR28_01119 | | -0.7 | -2.3 | Beta-hexosaminidase | compare |
| PFR28_03266 | | -0.7 | -1.0 | hypothetical protein | compare |
| PFR28_04369 | | -0.7 | -1.1 | hypothetical protein | compare |
| PFR28_03596 | | -0.7 | -1.0 | Transcriptional regulator MraZ | compare |
| PFR28_00089 | | -0.7 | -1.0 | Transcription termination/antitermination protein NusA | compare |