Experiment set4S459 for Bacteroides ovatus ATCC 8483

diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day8

Group: mouse
Media: + diet=StandardDiet; sample=FecalPellet; inoculation=Mono
Culturing: Bovatus_ATCC8483_ML6
By: Saria on 5/20/25

Specific Phenotypes

For 11 genes in this experiment

For mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono in Bacteroides ovatus ATCC 8483

For mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono across organisms

SEED Subsystems

Subsystem	#Specific
Fatty Acid Biosynthesis FASII	1
Potassium homeostasis	1
Respiratory Complex I	1
mycolic acid synthesis	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Fatty acid biosynthesis
• Oxidative phosphorylation
• Methionine metabolism
• Cysteine metabolism
• Selenoamino acid metabolism
• Nitrogen metabolism
• Sulfur metabolism
• Biosynthesis of unsaturated fatty acids
• Biosynthesis of plant hormones

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
NADH to cytochrome bo oxidase electron transfer I	2	1	1
NADH to cytochrome bd oxidase electron transfer I	2	1	1
aerobic respiration III (alternative oxidase pathway)	3	2	1
gondoate biosynthesis (anaerobic)	4	4	1
octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)	12	9	3
aerobic respiration I (cytochrome c)	4	2	1
palmitate biosynthesis III	29	21	7
tetradecanoate biosynthesis (mitochondria)	25	17	6
palmitate biosynthesis II (type II fatty acid synthase)	31	29	7
palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)	9	8	2
oleate biosynthesis IV (anaerobic)	14	13	3
superpathway of fatty acids biosynthesis (E. coli)	53	47	11
fatty acid elongation -- saturated	5	5	1
superpathway of unsaturated fatty acids biosynthesis (E. coli)	20	17	4
8-amino-7-oxononanoate biosynthesis IV	5	4	1
cis-vaccenate biosynthesis	5	4	1
superpathway of fatty acid biosynthesis II (plant)	43	37	8
8-amino-7-oxononanoate biosynthesis I	11	9	2
anteiso-branched-chain fatty acid biosynthesis	34	24	6
odd iso-branched-chain fatty acid biosynthesis	34	24	6
even iso-branched-chain fatty acid biosynthesis	34	24	6
stearate biosynthesis II (bacteria and plants)	6	5	1
(5Z)-dodecenoate biosynthesis I	6	5	1
stearate biosynthesis IV	6	4	1
(5Z)-dodecenoate biosynthesis II	6	4	1
NAD(P)/NADPH interconversion	6	2	1
petroselinate biosynthesis	6	2	1
Fe(II) oxidation	6	1	1
streptorubin B biosynthesis	34	20	5
biotin biosynthesis I	15	13	2
superpathway of fatty acid biosynthesis I (E. coli)	16	13	2
2-allylmalonyl-CoA biosynthesis	8	2	1
glutathione-mediated detoxification II	9	1	1
mycolate biosynthesis	205	23	5
superpathway of mycolate biosynthesis	239	24	5