Experiment set4S395 for Escherichia coli ECRC101

Compare to:

GB_Bas14

200 most important genes:

  gene name fitness t score description  
MCAODC_20475 perB -5.4 -3.7 GDP-perosamine N-acetyltransferase compare
MCAODC_14625 yohK -4.9 -7.5 CidB/LrgB family autolysis modulator compare
MCAODC_10400 -4.7 -1.7 Putative uncharacterized protein YgeF compare
MCAODC_23535 terW -4.5 -2.8 tellurium resistance protein TerW compare
MCAODC_06185 rfaJ -4.4 -7.4 glucosyltransferase compare
MCAODC_24855 ihfB -4.3 -2.8 integration host factor subunit beta compare
MCAODC_12295 guaA -3.9 -2.7 glutamine-hydrolyzing GMP synthase compare
MCAODC_24055 -3.9 -2.1 YccE compare
MCAODC_18135 sufE -3.8 -1.4 cysteine desulfuration protein SufE compare
MCAODC_23045 flgM -3.8 -1.4 anti-sigma-28 factor FlgM compare
MCAODC_23825 acpS2 -3.8 -1.4 putative holo-[acyl-carrier-protein] synthase 2 compare
MCAODC_14630 yohJ -3.7 -7.3 UPF0299 membrane protein YohJ compare
MCAODC_21495 -3.6 -1.7 DNA-binding protein compare
MCAODC_07565 ompR_G63V -3.6 -6.0 two-component system response regulator OmpR compare
MCAODC_22495 -3.5 -1.3 CP4-44 prophage putative disrupted hemin or colicin receptor compare
MCAODC_21675 rssB -3.4 -2.4 two-component system response regulator RssB compare
MCAODC_06195 rfaL -3.4 -5.8 O-antigen ligase RfaL compare
MCAODC_12290 guaB -3.3 -4.6 IMP dehydrogenase compare
MCAODC_04590 typA -3.3 -11.8 ribosome-dependent GTPase TypA compare
MCAODC_22925 fabF -3.3 -1.7 beta-ketoacyl-ACP synthase II compare
MCAODC_20480 cpsG -3.2 -2.2 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_21030 gatA -3.1 -1.6 PTS galactitol transporter subunit IIA compare
MCAODC_00195 proB -3.1 -6.9 Glutamate 5-kinase compare
MCAODC_06955 pitA -3.1 -3.0 inorganic phosphate transporter PitA compare
MCAODC_04060 sthA -3.1 -7.9 Si-specific NAD(P)(+) transhydrogenase compare
MCAODC_20530 wcaA -3.0 -2.8 glycosyl transferase compare
MCAODC_27555 clpX -3.0 -2.1 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_25785 -2.9 -1.5 DUF3927 domain-containing protein compare
MCAODC_04780 tatC -2.8 -2.0 Sec-independent protein translocase subunit TatC compare
MCAODC_26700 rnk -2.8 -2.8 nucleoside diphosphate kinase regulator compare
MCAODC_15450 -2.8 -4.2 hypothetical protein compare
MCAODC_13900 nuoF -2.7 -6.3 NADH-quinone oxidoreductase subunit NuoF compare
MCAODC_00190 proA -2.7 -9.4 glutamate-5-semialdehyde dehydrogenase compare
MCAODC_16950 nleG2-3 -2.7 -2.4 DUF1076 domain-containing protein compare
MCAODC_17740 ydgC -2.7 -3.9 Inner membrane protein YdgC compare
MCAODC_13895 nuoE -2.7 -2.0 NADH-quinone oxidoreductase subunit NuoE compare
MCAODC_25570 moaD -2.6 -2.9 molybdopterin synthase sulfur carrier subunit compare
MCAODC_00995 acnB -2.6 -2.5 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_08200 fis -2.6 -2.6 DNA-binding transcriptional regulator Fis compare
MCAODC_20085 -2.5 -1.3 hypothetical protein compare
MCAODC_02405 treC -2.5 -1.7 alpha,alpha-phosphotrehalase compare
MCAODC_01560 dnaJ -2.5 -2.1 molecular chaperone DnaJ compare
MCAODC_16675 ydeM -2.5 -1.3 anaerobic sulfatase maturase compare
MCAODC_06205 rfaF -2.5 -1.7 ADP-heptose--LPS heptosyltransferase RfaF compare
MCAODC_13910 nuoH -2.5 -3.4 NADH-quinone oxidoreductase subunit NuoH compare
MCAODC_26025 tolB -2.5 -5.2 Tol-Pal system protein TolB compare
MCAODC_19800 yedJ -2.4 -2.1 phosphohydrolase compare
MCAODC_27385 ybaB -2.4 -1.4 YbaB/EbfC family nucleoid-associated protein compare
MCAODC_09085 higA -2.4 -1.7 type II toxin-antitoxin system antitoxin HigA compare
MCAODC_08475 lptC -2.4 -2.5 LPS export ABC transporter periplasmic protein LptC compare
MCAODC_04655 -2.3 -1.2 hypothetical protein compare
MCAODC_23260 -2.3 -1.9 toxin compare
MCAODC_21865 ldcA -2.3 -1.6 muramoyltetrapeptide carboxypeptidase compare
MCAODC_22850 ycfJ -2.3 -1.4 Uncharacterized protein YcfJ compare
MCAODC_24060 -2.3 -1.2 YccE compare
MCAODC_16700 ydeQ -2.3 -3.4 Uncharacterized fimbrial-like protein YdeQ compare
MCAODC_16870 pspE -2.2 -1.7 rhodanese compare
MCAODC_04045 fabR -2.2 -9.3 HTH-type transcriptional repressor FabR compare
MCAODC_23610 -2.2 -1.4 Transposase compare
MCAODC_10025 pepP -2.2 -6.5 Xaa-Pro aminopeptidase compare
MCAODC_05085 wecA -2.1 -12.2 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_08625 nusA -2.1 -1.6 Transcription termination/antitermination protein NusA compare
MCAODC_05285 mioC -2.1 -6.4 FMN-binding protein MioC compare
MCAODC_15400 ccdB -2.1 -1.1 type II toxin-antitoxin system toxin CcdB compare
MCAODC_11950 recO -2.1 -3.3 DNA repair protein RecO compare
MCAODC_20540 -2.1 -9.2 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_06190 rfaB -2.1 -4.2 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_25195 -2.1 -1.1 DUF1418 domain-containing protein compare
MCAODC_07520 -2.1 -4.1 NfuA family Fe-S biogenesis protein compare
MCAODC_27835 proC -2.0 -3.5 pyrroline-5-carboxylate reductase compare
MCAODC_26145 sucA -2.0 -2.4 2-oxoglutarate dehydrogenase E1 component compare
MCAODC_27545 -2.0 -4.8 Lon protease compare
MCAODC_12720 ptsI -2.0 -1.8 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_07455 glpD -2.0 -5.4 glycerol-3-phosphate dehydrogenase compare
MCAODC_13915 nuoI -2.0 -3.3 NADH-quinone oxidoreductase subunit NuoI compare
MCAODC_23280 yeeS -2.0 -1.0 UPF0758 protein YeeS compare
MCAODC_13930 nuoL -2.0 -6.9 NADH-quinone oxidoreductase subunit L compare
MCAODC_22880 -2.0 -2.6 DUF1425 domain-containing protein compare
MCAODC_18040 cfa -2.0 -5.1 cyclopropane fatty acyl phospholipid synthase compare
MCAODC_26040 tolQ -1.9 -1.3 Tol-Pal system protein TolQ compare
MCAODC_02745 purA -1.9 -1.8 adenylosuccinate synthase compare
MCAODC_16400 -1.9 -2.5 Putative inner membrane exporter, YdcZ compare
MCAODC_13880 nuoA -1.9 -3.1 NADH-quinone oxidoreductase subunit NuoA compare
MCAODC_21670 galU -1.9 -2.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MCAODC_20220 Asn_trna -1.9 -1.0 tRNA-Asn(gtt) compare
MCAODC_21635 -1.9 -1.2 hypothetical protein compare
MCAODC_13265 -1.8 -2.9 hypothetical protein compare
MCAODC_19490 gpA1 -1.8 -1.7 Phage terminase, large subunit GpA compare
MCAODC_00160 -1.8 -7.9 Repressor protein cI compare
MCAODC_13710 truA -1.8 -2.4 aspartate-semialdehyde dehydrogenase compare
MCAODC_25565 moaE -1.8 -1.1 molybdopterin synthase catalytic subunit MoaE compare
MCAODC_20655 -1.8 -2.3 transcriptional regulator compare
MCAODC_23370 -1.8 -1.3 Putative UvrD/REP helicase-like protein compare
MCAODC_07190 dcrB -1.8 -6.6 phage sensitivity protein DcrB compare
MCAODC_16155 ydbL -1.8 -1.5 DUF1318 domain-containing protein compare
MCAODC_23670 -1.7 -1.4 restriction endonuclease compare
MCAODC_13885 nuoB -1.7 -4.2 NADH-quinone oxidoreductase subunit NuoB compare
MCAODC_13940 nuoN -1.7 -3.9 NADH-quinone oxidoreductase subunit NuoN compare
MCAODC_19060 kdgA -1.7 -1.1 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
MCAODC_08660 pnp -1.7 -6.0 polyribonucleotide nucleotidyltransferase compare
MCAODC_13925 nuoK -1.7 -1.8 NADH-quinone oxidoreductase subunit NuoK compare
MCAODC_16990 gp18 -1.7 -1.7 phage minor tail protein L compare
MCAODC_01200 cra -1.7 -6.0 catabolite repressor/activator compare
MCAODC_04200 -1.7 -2.3 Rhs element protein compare
MCAODC_22420 -1.7 -1.8 DUF4222 domain-containing protein compare
MCAODC_00465 -1.6 -2.1 hypothetical protein compare
MCAODC_22745 eCs1768 -1.6 -2.2 phage replisome organizer compare
MCAODC_11500 -1.6 -1.0 hypothetical protein compare
MCAODC_14755 -1.6 -2.0 hypothetical protein compare
MCAODC_25300 gsiD -1.5 -3.7 glutathione ABC transporter permease GsiD compare
MCAODC_13120 -1.5 -1.9 sugar acetyltransferase inhibitor compare
MCAODC_21850 ychF -1.5 -0.8 redox-regulated ATPase YchF compare
MCAODC_13920 nuoJ -1.5 -3.1 NADH-quinone oxidoreductase subunit J compare
MCAODC_23890 fabG -1.5 -1.1 oxidoreductase compare
MCAODC_23585 -1.5 -1.0 Membrane protein compare
MCAODC_02675 ulaR -1.5 -3.5 HTH-type transcriptional regulator UlaR compare
MCAODC_16355 hicB -1.5 -1.7 type II toxin-antitoxin system antitoxin HicB compare
MCAODC_03490 -1.5 -0.9 phage tail protein compare
MCAODC_19890 -1.5 -1.1 Phage-related protein, tail protein J compare
MCAODC_28280 -1.5 -4.3 hypothetical protein compare
MCAODC_22410 -1.5 -1.0 hypothetical protein compare
MCAODC_19675 fliE -1.5 -2.0 flagellar hook-basal body complex protein FliE compare
MCAODC_18700 yeaG -1.5 -3.0 protein kinase YeaG compare
MCAODC_01360 apaH -1.4 -1.3 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
MCAODC_15165 repA -1.4 -1.9 incFII family plasmid replication initiator RepA compare
MCAODC_00445 hcp -1.4 -1.2 type VI secretion system tube protein Hcp compare
MCAODC_16265 -1.4 -1.2 Regulatory protein mokB compare
MCAODC_00050 ybcO -1.4 -1.2 Putative nuclease YbcO compare
MCAODC_17520 -1.4 -1.9 Rha family transcriptional regulator compare
MCAODC_13935 nuoM -1.4 -3.0 NADH-quinone oxidoreductase subunit M compare
MCAODC_13890 nuoC -1.4 -4.1 NADH-quinone oxidoreductase subunit C/D compare
MCAODC_13545 -1.4 -1.3 bacteriocin compare
MCAODC_21305 -1.4 -1.0 phage tail tape measure protein compare
MCAODC_01340 surA -1.4 -3.5 peptidylprolyl isomerase SurA compare
MCAODC_04685 mobA -1.4 -5.4 molybdenum cofactor guanylyltransferase MobA compare
MCAODC_05055 rffC -1.4 -5.1 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
MCAODC_21510 -1.4 -2.1 Putative bacterial toxin ydaT compare
MCAODC_24150 etk -1.4 -4.8 tyrosine-protein kinase compare
MCAODC_07505 malP -1.3 -7.6 maltodextrin phosphorylase compare
MCAODC_13350 Arg_trna -1.3 -1.5 tRNA-Arg(tct) compare
MCAODC_07570 envZ -1.3 -5.6 two-component system sensor histidine kinase EnvZ compare
MCAODC_00350 -1.3 -0.9 Ankyrin repeat containing virulence factor compare
MCAODC_06165 rfaG -1.3 -2.9 Lipopolysaccharide core biosynthesis protein RfaG compare
MCAODC_11970 shoB -1.3 -0.9 Small toxic protein ShoB compare
MCAODC_19365 yecH -1.3 -1.1 Uncharacterized protein YecH compare
MCAODC_25330 moeA -1.3 -3.9 molybdopterin molybdotransferase MoeA compare
MCAODC_26020 pal -1.3 -1.9 peptidoglycan-associated lipoprotein Pal compare
MCAODC_06175 waaO -1.3 -3.5 lipopolysaccharide 3-alpha-galactosyltransferase compare
MCAODC_26570 rsfS -1.3 -2.9 ribosome silencing factor compare
MCAODC_07005 hicB -1.3 -3.5 toxin-antitoxin system HicB family antitoxin compare
MCAODC_17860 rsxB -1.3 -1.5 electron transport complex subunit RsxB compare
MCAODC_20605 wcaE -1.3 -1.0 colanic acid biosynthesis glycosyltransferase WcaE compare
MCAODC_25450 mcbA -1.3 -2.8 DUF1471 domain-containing protein compare
MCAODC_13905 nuoG -1.3 -3.7 NADH-quinone oxidoreductase subunit NuoG compare
MCAODC_27170 -1.3 -1.3 Protein compare
MCAODC_10405 -1.3 -1.3 Uncharacterized protein YqeK compare
MCAODC_11910 rseA -1.3 -2.6 anti-sigma-E factor RseA compare
MCAODC_26135 sucC -1.3 -2.9 ADP-forming succinate--CoA ligase subunit beta compare
MCAODC_13420 -1.3 -0.9 hypothetical protein compare
MCAODC_26325 ybfF -1.3 -4.8 esterase compare
MCAODC_26180 gltA -1.3 -4.1 citrate synthase compare
MCAODC_10370 ygeN -1.3 -1.3 Putative uncharacterized protein YgeN compare
MCAODC_27620 panE -1.3 -7.0 2-dehydropantoate 2-reductase compare
MCAODC_21795 sirB1 -1.3 -2.4 invasion regulator SirB1 compare
MCAODC_16710 ydeS -1.2 -1.5 Uncharacterized fimbrial-like protein YdeS compare
MCAODC_04965 hemX -1.2 -6.7 uroporphyrinogen-III C-methyltransferase compare
MCAODC_15150 repA2 -1.2 -4.8 Replication regulatory protein repA2 compare
MCAODC_19865 -1.2 -1.0 hypothetical protein compare
MCAODC_25910 modC -1.2 -4.3 molybdenum ABC transporter ATP-binding protein ModC compare
MCAODC_05100 trxA -1.2 -1.7 thioredoxin TrxA compare
MCAODC_14915 rusA -1.2 -1.3 crossover junction endodeoxyribonuclease RusA compare
MCAODC_20490 wbdQ -1.2 -1.1 GDP-mannose mannosyl hydrolase WbdQ/WbhG compare
MCAODC_17105 -1.2 -0.8 TrmB family transcriptional regulator compare
MCAODC_21335 -1.2 -0.9 phage tail protein compare
MCAODC_05985 -1.2 -0.8 Aec79 compare
MCAODC_18835 yoaB -1.2 -1.4 RutC family protein YoaB compare
MCAODC_11025 hosA -1.1 -2.8 Transcriptional regulator HosA compare
MCAODC_04650 polA -1.1 -1.1 DNA polymerase I compare
MCAODC_19425 -1.1 -1.6 Phage protein compare
MCAODC_25090 -1.1 -1.9 hypothetical protein compare
MCAODC_25280 -1.1 -1.5 addiction module toxin RelE compare
MCAODC_14810 bet -1.1 -1.8 phage recombination protein Bet compare
MCAODC_07510 malQ -1.1 -8.1 4-alpha-glucanotransferase compare
MCAODC_22700 -1.1 -1.0 DUF551 domain-containing protein compare
MCAODC_15860 pspA -1.1 -1.7 phage shock protein PspA compare
MCAODC_18000 mepH -1.1 -2.5 peptidoglycan DD-endopeptidase MepH compare
MCAODC_14980 -1.1 -0.9 SAR-endolysin compare
MCAODC_16335 sutR -1.1 -1.4 DNA-binding transcriptional regulator SutR compare
MCAODC_21775 ldrB -1.1 -0.8 Small toxic polypeptide LdrB compare
MCAODC_04330 pfkA -1.1 -1.1 6-phosphofructokinase compare
MCAODC_16590 bdm -1.1 -1.2 biofilm-dependent modulation protein compare
MCAODC_15840 puuC -1.1 -0.8 aldehyde dehydrogenase PuuC compare
MCAODC_06345 yibG -1.1 -1.7 Uncharacterized protein YibG compare
MCAODC_04345 cpxR -1.1 -3.4 envelope stress response regulator transcription factor CpxR compare
MCAODC_24140 gfcE -1.1 -3.8 Putative polysaccharide export protein GfcE compare
MCAODC_08310 argR -1.1 -2.2 transcriptional regulator ArgR compare
MCAODC_24235 sodC -1.1 -2.7 superoxide dismutase [Cu-Zn] SodC compare
MCAODC_24070 cbpM -1.1 -1.3 chaperone modulator CbpM compare
MCAODC_04350 cpxA -1.1 -4.3 envelope stress sensor histidine kinase CpxA compare
MCAODC_25390 mntR -1.1 -2.4 manganese-binding transcriptional regulator MntR compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECRC101 in phage experiments

For phage Phage across organisms