Experiment set4S391 for Escherichia coli ECRC101

Compare to:

GB_Bas36

200 most important genes:

  gene name fitness t score description  
MCAODC_20530 wcaA -6.0 -3.1 glycosyl transferase compare
MCAODC_08200 fis -5.1 -2.6 DNA-binding transcriptional regulator Fis compare
MCAODC_20900 -5.0 -1.5 phage tail protein compare
MCAODC_21900 dsbB -5.0 -3.3 disulfide bond formation protein DsbB compare
MCAODC_20485 manC2 -4.9 -2.5 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_09425 ftsP -4.8 -2.8 cell division protein FtsP compare
MCAODC_14630 yohJ -4.7 -10.5 UPF0299 membrane protein YohJ compare
MCAODC_21335 -4.5 -1.3 phage tail protein compare
MCAODC_18450 chbB -4.4 -2.2 PTS N,N'-diacetylchitobiose transporter subunit IIB compare
MCAODC_24995 Ser_trna -4.4 -1.3 tRNA-Ser(gga) compare
MCAODC_12290 guaB -4.3 -3.0 IMP dehydrogenase compare
MCAODC_14625 yohK -4.3 -7.7 CidB/LrgB family autolysis modulator compare
MCAODC_04590 typA -4.2 -14.7 ribosome-dependent GTPase TypA compare
MCAODC_23535 terW -4.2 -2.1 tellurium resistance protein TerW compare
MCAODC_16705 ydeR -4.2 -1.3 Uncharacterized fimbrial-like protein YdeR compare
MCAODC_23585 -4.2 -1.2 Membrane protein compare
MCAODC_13880 nuoA -4.1 -4.0 NADH-quinone oxidoreductase subunit NuoA compare
MCAODC_21025 gatB -4.1 -1.2 PTS galactitol transporter subunit IIB compare
MCAODC_22030 yciE -4.1 -2.1 Protein YciF compare
MCAODC_07680 frlD -4.0 -1.7 fructoselysine 6-kinase compare
MCAODC_23890 fabG -4.0 -2.0 oxidoreductase compare
MCAODC_15720 yciH -4.0 -1.2 stress response translation initiation inhibitor YciH compare
MCAODC_25195 -4.0 -1.2 DUF1418 domain-containing protein compare
MCAODC_17535 -3.9 -2.0 stability determinant compare
MCAODC_08220 yhdT -3.8 -1.5 Uncharacterized membrane protein YhdT compare
MCAODC_13915 nuoI -3.8 -4.4 NADH-quinone oxidoreductase subunit NuoI compare
MCAODC_12295 guaA -3.7 -2.6 glutamine-hydrolyzing GMP synthase compare
MCAODC_24055 -3.7 -1.6 YccE compare
MCAODC_20335 yeeT -3.7 -1.5 Uncharacterized protein YeeT compare
MCAODC_20540 -3.7 -11.0 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_23825 acpS2 -3.7 -1.1 putative holo-[acyl-carrier-protein] synthase 2 compare
MCAODC_21515 -3.6 -1.1 transcriptional regulator compare
MCAODC_26130 sucD -3.6 -5.5 succinate--CoA ligase subunit alpha compare
MCAODC_22380 -3.6 -1.7 head decoration protein compare
MCAODC_21850 ychF -3.5 -1.0 redox-regulated ATPase YchF compare
MCAODC_16130 ydbJ -3.5 -1.5 Uncharacterized protein YdbJ compare
MCAODC_17860 rsxB -3.5 -3.4 electron transport complex subunit RsxB compare
MCAODC_06955 pitA -3.5 -2.4 inorganic phosphate transporter PitA compare
MCAODC_18270 ppsR -3.4 -2.0 posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR compare
MCAODC_18095 -3.4 -1.7 Putative oxidoreductase Fe-S subunit compare
MCAODC_13930 nuoL -3.4 -8.7 NADH-quinone oxidoreductase subunit L compare
MCAODC_27835 proC -3.3 -3.2 pyrroline-5-carboxylate reductase compare
MCAODC_00190 proA -3.3 -8.6 glutamate-5-semialdehyde dehydrogenase compare
MCAODC_27170 -3.3 -2.1 Protein compare
MCAODC_07455 glpD -3.3 -5.0 glycerol-3-phosphate dehydrogenase compare
MCAODC_02745 purA -3.2 -1.6 adenylosuccinate synthase compare
MCAODC_25570 moaD -3.2 -1.7 molybdopterin synthase sulfur carrier subunit compare
MCAODC_22925 fabF -3.2 -1.3 beta-ketoacyl-ACP synthase II compare
MCAODC_04350 cpxA -3.2 -8.2 envelope stress sensor histidine kinase CpxA compare
MCAODC_10290 -3.2 -1.3 type III secretion protein compare
MCAODC_13900 nuoF -3.1 -6.7 NADH-quinone oxidoreductase subunit NuoF compare
MCAODC_04185 metJ -3.1 -3.0 met regulon transcriptional regulator MetJ compare
MCAODC_20355 yeeX -3.1 -2.2 DUF496 domain-containing protein compare
MCAODC_06185 rfaJ -3.1 -5.0 glucosyltransferase compare
MCAODC_04760 fre -3.1 -7.4 NAD(P)H-flavin reductase compare
MCAODC_10075 sdhE -3.1 -1.3 FAD assembly factor SdhE compare
MCAODC_06195 rfaL -3.1 -6.2 O-antigen ligase RfaL compare
MCAODC_13905 nuoG -3.1 -7.8 NADH-quinone oxidoreductase subunit NuoG compare
MCAODC_01360 apaH -3.0 -2.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
MCAODC_20480 cpsG -3.0 -1.7 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_21675 rssB -3.0 -2.9 two-component system response regulator RssB compare
MCAODC_06105 pyrL -2.9 -1.7 Putative PyrE leader peptide compare
MCAODC_10025 pepP -2.9 -6.8 Xaa-Pro aminopeptidase compare
MCAODC_12720 ptsI -2.9 -1.9 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_17390 -2.9 -2.0 DUF3950 domain-containing protein compare
MCAODC_27555 clpX -2.9 -2.0 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_21375 nu1 -2.9 -1.6 terminase small subunit compare
MCAODC_16590 bdm -2.8 -2.3 biofilm-dependent modulation protein compare
MCAODC_10085 fldB -2.8 -2.7 flavodoxin FldB compare
MCAODC_23655 -2.8 -1.8 hypothetical protein compare
MCAODC_13940 nuoN -2.8 -4.2 NADH-quinone oxidoreductase subunit NuoN compare
MCAODC_17995 grxD -2.8 -2.8 monothiol glutaredoxin 4 compare
MCAODC_25785 -2.8 -1.2 DUF3927 domain-containing protein compare
MCAODC_05085 wecA -2.8 -10.7 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_17705 mdtJ -2.8 -2.1 multidrug/spermidine efflux SMR transporter subunit MdtJ compare
MCAODC_13925 nuoK -2.7 -2.3 NADH-quinone oxidoreductase subunit NuoK compare
MCAODC_23670 -2.7 -1.4 restriction endonuclease compare
MCAODC_21495 -2.7 -1.6 DNA-binding protein compare
MCAODC_08475 lptC -2.7 -3.9 LPS export ABC transporter periplasmic protein LptC compare
MCAODC_20490 wbdQ -2.7 -1.1 GDP-mannose mannosyl hydrolase WbdQ/WbhG compare
MCAODC_17125 -2.7 -2.2 hypothetical protein compare
MCAODC_27545 -2.7 -4.1 Lon protease compare
MCAODC_00195 proB -2.7 -4.4 Glutamate 5-kinase compare
MCAODC_12310 yfgG -2.7 -2.3 Uncharacterized protein YfgG compare
MCAODC_13920 nuoJ -2.6 -4.7 NADH-quinone oxidoreductase subunit J compare
MCAODC_00800 yadW -2.6 -1.5 Protein YadW compare
MCAODC_04060 sthA -2.6 -7.5 Si-specific NAD(P)(+) transhydrogenase compare
MCAODC_05285 mioC -2.6 -5.8 FMN-binding protein MioC compare
MCAODC_06170 rfaP -2.6 -4.4 lipopolysaccharide core heptose(I) kinase RfaP compare
MCAODC_16710 ydeS -2.6 -1.7 Uncharacterized fimbrial-like protein YdeS compare
MCAODC_15730 yciT -2.6 -1.3 DNA-binding transcriptional regulator YciT compare
MCAODC_26135 sucC -2.5 -4.2 ADP-forming succinate--CoA ligase subunit beta compare
MCAODC_16775 lsrF -2.5 -4.1 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
MCAODC_19430 -2.5 -2.9 hypothetical protein compare
MCAODC_27135 hyi -2.5 -1.4 hydroxypyruvate isomerase compare
MCAODC_11910 rseA -2.4 -3.3 anti-sigma-E factor RseA compare
MCAODC_23460 -2.4 -2.4 ShiA compare
MCAODC_21455 rusA -2.4 -1.0 Endodeoxyribonuclease RusA compare
MCAODC_24780 gloC -2.4 -1.9 hydroxyacylglutathione hydrolase GloC compare
MCAODC_26140 odhB -2.4 -1.5 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase compare
MCAODC_14730 yohO -2.4 -1.5 protein YohO compare
MCAODC_01530 fimD -2.3 -1.8 fimbrial assembly protein compare
MCAODC_13910 nuoH -2.3 -3.7 NADH-quinone oxidoreductase subunit NuoH compare
MCAODC_08900 yhaB -2.3 -1.0 Uncharacterized protein YhaB compare
MCAODC_01200 cra -2.3 -5.8 catabolite repressor/activator compare
MCAODC_18670 yeaC -2.3 -1.9 Uncharacterized protein YeaC compare
MCAODC_00995 acnB -2.3 -2.2 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_17160 -2.3 -2.7 hypothetical protein compare
MCAODC_16105 uspF -2.3 -2.3 universal stress protein UspF compare
MCAODC_19800 yedJ -2.2 -1.7 phosphohydrolase compare
MCAODC_13890 nuoC -2.2 -6.6 NADH-quinone oxidoreductase subunit C/D compare
MCAODC_26180 gltA -2.2 -6.1 citrate synthase compare
MCAODC_15450 -2.2 -3.1 hypothetical protein compare
MCAODC_14915 rusA -2.2 -1.7 crossover junction endodeoxyribonuclease RusA compare
MCAODC_19345 yecJ -2.2 -1.9 Uncharacterized protein YecJ compare
MCAODC_15740 -2.2 -1.8 EAL domain-containing protein compare
MCAODC_14780 -2.1 -1.2 conjugal transfer protein TraR compare
MCAODC_20395 yoeI -2.1 -1.2 Uncharacterized protein YoeI compare
MCAODC_26165 sdhD -2.1 -4.7 succinate dehydrogenase membrane anchor subunit compare
MCAODC_15905 ugpA -2.1 -4.1 sugar ABC transporter permease compare
MCAODC_13885 nuoB -2.1 -4.8 NADH-quinone oxidoreductase subunit NuoB compare
MCAODC_03490 -2.0 -0.8 phage tail protein compare
MCAODC_26155 sdhB -2.0 -3.0 succinate dehydrogenase iron-sulfur subunit SdhB compare
MCAODC_07520 -2.0 -3.3 NfuA family Fe-S biogenesis protein compare
MCAODC_09970 argP -2.0 -3.4 DNA-binding transcriptional regulator ArgP compare
MCAODC_16225 -2.0 -2.6 hypothetical protein compare
MCAODC_23435 -2.0 -1.1 Oligogalacturonate-specific porin protein KdgM compare
MCAODC_20375 sbcB -2.0 -3.2 exodeoxyribonuclease I compare
MCAODC_04655 -2.0 -0.8 hypothetical protein compare
MCAODC_08660 pnp -2.0 -4.2 polyribonucleotide nucleotidyltransferase compare
MCAODC_07005 hicB -1.9 -3.7 toxin-antitoxin system HicB family antitoxin compare
MCAODC_26185 -1.9 -3.2 Fimbrial protein compare
MCAODC_04480 yiiE -1.9 -1.8 Uncharacterized protein YiiE compare
MCAODC_14885 ybcK -1.9 -1.0 Uncharacterized protein YbcK compare
MCAODC_15715 pyrF -1.9 -3.1 orotidine-5'-phosphate decarboxylase compare
MCAODC_24855 ihfB -1.9 -1.1 integration host factor subunit beta compare
MCAODC_18005 sodB -1.9 -4.3 superoxide dismutase [Fe] compare
MCAODC_21030 gatA -1.9 -1.1 PTS galactitol transporter subunit IIA compare
MCAODC_21635 -1.9 -1.0 hypothetical protein compare
MCAODC_18115 fumD -1.9 -3.2 fumarate hydratase FumD compare
MCAODC_27595 cyoC -1.9 -5.1 cytochrome o ubiquinol oxidase subunit III compare
MCAODC_27385 ybaB -1.9 -1.2 YbaB/EbfC family nucleoid-associated protein compare
MCAODC_21155 metG -1.9 -1.3 methionine--tRNA ligase compare
MCAODC_26990 Arg_trna -1.8 -2.6 tRNA-Arg(tct) compare
MCAODC_19390 -1.8 -2.8 Putative transmembrane protein compare
MCAODC_21305 -1.8 -0.9 phage tail tape measure protein compare
MCAODC_16280 ydcI -1.8 -3.3 Uncharacterized HTH-type transcriptional regulator YdcI compare
MCAODC_26160 sdhA -1.8 -6.4 succinate dehydrogenase flavoprotein subunit compare
MCAODC_18040 cfa -1.8 -4.1 cyclopropane fatty acyl phospholipid synthase compare
MCAODC_02505 ytfP -1.8 -4.2 Gamma-glutamylcyclotransferase family protein YtfP compare
MCAODC_19425 -1.8 -1.5 Phage protein compare
MCAODC_22475 -1.8 -1.3 hypothetical protein compare
MCAODC_13935 nuoM -1.8 -4.0 NADH-quinone oxidoreductase subunit M compare
MCAODC_26040 tolQ -1.8 -1.1 Tol-Pal system protein TolQ compare
MCAODC_19750 dsrB -1.8 -1.0 protein DsrB compare
MCAODC_23280 yeeS -1.8 -0.7 UPF0758 protein YeeS compare
MCAODC_11890 srmB -1.8 -5.1 ATP-dependent RNA helicase SrmB compare
MCAODC_18255 ydiT -1.8 -1.2 Ferredoxin-like protein YdiT compare
MCAODC_23180 -1.8 -2.2 Uncharacterized protein YmdA compare
MCAODC_17955 sodC -1.8 -1.5 superoxide dismutase [Cu-Zn] SodC compare
MCAODC_16880 mgtS -1.7 -1.3 protein MgtS compare
MCAODC_23710 -1.7 -1.6 hypothetical protein compare
MCAODC_18440 chbA -1.7 -1.0 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
MCAODC_04450 fdhD -1.7 -6.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MCAODC_27130 glxR -1.7 -2.5 2-hydroxy-3-oxopropionate reductase compare
MCAODC_05100 trxA -1.7 -3.0 thioredoxin TrxA compare
MCAODC_07495 -1.7 -2.9 DUF1778 domain-containing protein compare
MCAODC_28565 -1.7 -1.8 hypothetical protein compare
MCAODC_12300 yfgI -1.7 -1.2 Uncharacterized protein YfgI compare
MCAODC_10330 flhB -1.7 -0.8 EscU/YscU/HrcU family type III secretion system export apparatus switch protein compare
MCAODC_20100 -1.7 -0.8 hypothetical protein compare
MCAODC_25330 moeA -1.7 -4.7 molybdopterin molybdotransferase MoeA compare
MCAODC_14170 nrdA -1.7 -1.0 ribonucleoside-diphosphate reductase subunit alpha compare
MCAODC_21775 ldrB -1.7 -0.9 Small toxic polypeptide LdrB compare
MCAODC_25910 modC -1.6 -3.9 molybdenum ABC transporter ATP-binding protein ModC compare
MCAODC_08640 rbfA -1.6 -2.4 30S ribosome-binding factor RbfA compare
MCAODC_26145 sucA -1.6 -2.2 2-oxoglutarate dehydrogenase E1 component compare
MCAODC_20860 -1.6 -2.4 Spike protein compare
MCAODC_17495 -1.6 -2.2 DUF551 domain-containing protein compare
MCAODC_19035 -1.6 -1.7 hypothetical protein compare
MCAODC_22880 -1.6 -1.7 DUF1425 domain-containing protein compare
MCAODC_04045 fabR -1.6 -6.9 HTH-type transcriptional repressor FabR compare
MCAODC_14980 -1.6 -0.9 SAR-endolysin compare
MCAODC_19505 -1.6 -4.3 oxidoreductase compare
MCAODC_25470 ybiJ -1.6 -2.1 DUF1471 domain-containing protein compare
MCAODC_21650 ychT -1.6 -1.2 Protein YchT compare
MCAODC_00160 -1.6 -5.1 Repressor protein cI compare
MCAODC_13895 nuoE -1.6 -1.3 NADH-quinone oxidoreductase subunit NuoE compare
MCAODC_01715 serB -1.6 -3.8 phosphoserine phosphatase compare
MCAODC_05390 pstC -1.6 -3.2 phosphate ABC transporter permease PstC compare
MCAODC_22500 espN -1.6 -1.6 type III secretion system effector EspN compare
MCAODC_15150 repA2 -1.5 -5.7 Replication regulatory protein repA2 compare
MCAODC_08160 yhdV -1.5 -1.6 Uncharacterized protein YhdV compare
MCAODC_24775 aspC -1.5 -1.5 aspartate transaminase compare
MCAODC_01590 mog -1.5 -3.8 molybdopterin adenylyltransferase compare
MCAODC_09775 yggS -1.5 -4.6 pyridoxal phosphate homeostasis protein compare
MCAODC_03845 hupA -1.5 -2.0 DNA-binding protein HU-alpha compare
MCAODC_14150 yfaE -1.5 -1.5 ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE compare
MCAODC_20475 perB -1.5 -1.7 GDP-perosamine N-acetyltransferase compare
MCAODC_11635 espM2 -1.5 -0.8 T3SS effector guanine nucleotide exchange factor EspM2 compare


Specific Phenotypes

For 2 genes in this experiment

For phage Phage in Escherichia coli ECRC101

For phage Phage across organisms