Experiment set4S347 for Escherichia coli ECRC101

Compare to:

Bas06

200 most important genes:

  gene name fitness t score description  
MCAODC_11310 emrR -6.7 -4.6 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
MCAODC_24125 gfcB -6.1 -5.9 Uncharacterized lipoprotein GfcB compare
MCAODC_20485 manC2 -5.5 -3.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_08200 fis -5.4 -3.1 DNA-binding transcriptional regulator Fis compare
MCAODC_24145 etp -5.2 -6.7 protein-tyrosine-phosphatase Etp compare
MCAODC_24130 gfcC -4.8 -7.8 Uncharacterized protein GfcC compare
MCAODC_24135 gfcD -4.8 -16.8 Uncharacterized lipoprotein GfcD compare
MCAODC_24150 etk -4.7 -10.4 tyrosine-protein kinase compare
MCAODC_17770 manA -4.5 -2.1 mannose-6-phosphate isomerase compare
MCAODC_11320 ygaZ -4.3 -9.2 L-valine exporter subunit YgaZ compare
MCAODC_24140 gfcE -4.3 -9.6 Putative polysaccharide export protein GfcE compare
MCAODC_02170 uvrD -4.1 -17.7 DNA helicase compare
MCAODC_05065 rffG -3.9 -17.6 dTDP-glucose 4,6-dehydratase compare
MCAODC_08565 greA -3.9 -3.9 transcription elongation factor GreA compare
MCAODC_21675 rssB -3.9 -2.7 two-component system response regulator RssB compare
MCAODC_09775 yggS -3.8 -6.5 pyridoxal phosphate homeostasis protein compare
MCAODC_17875 rsxG -3.8 -3.2 electron transport complex subunit RsxG compare
MCAODC_12295 guaA -3.7 -3.6 glutamine-hydrolyzing GMP synthase compare
MCAODC_26025 tolB -3.6 -3.5 Tol-Pal system protein TolB compare
MCAODC_04590 typA -3.6 -13.8 ribosome-dependent GTPase TypA compare
MCAODC_08350 sspA -3.5 -7.5 stringent starvation protein A compare
MCAODC_14020 arnD -3.5 -5.5 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase compare
MCAODC_02185 hepA -3.4 -14.6 helicase compare
MCAODC_02745 purA -3.4 -2.0 adenylosuccinate synthase compare
MCAODC_08625 nusA -3.4 -2.1 Transcription termination/antitermination protein NusA compare
MCAODC_25935 galE -3.4 -8.6 UDP-glucose 4-epimerase GalE compare
MCAODC_18125 lpp -3.4 -1.1 murein lipoprotein Lpp compare
MCAODC_20535 galF -3.3 -5.9 UTP--glucose-1-phosphate uridylyltransferase GalF compare
MCAODC_02775 miaA -3.3 -4.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
MCAODC_02180 yeeA -3.3 -23.5 Site-specific DNA-methyltransferase (adenine-specific) compare
MCAODC_19060 kdgA -3.3 -1.6 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
MCAODC_10330 flhB -3.2 -1.5 EscU/YscU/HrcU family type III secretion system export apparatus switch protein compare
MCAODC_13720 accD -3.2 -1.9 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
MCAODC_21305 -3.2 -1.5 phage tail tape measure protein compare
MCAODC_03675 pgi -3.1 -8.5 glucose-6-phosphate isomerase compare
MCAODC_20635 wzb -3.1 -3.1 low molecular weight protein-tyrosine-phosphatase Wzb compare
MCAODC_26380 nagA -3.0 -6.7 N-acetylglucosamine-6-phosphate deacetylase compare
MCAODC_20490 wbdQ -3.0 -1.3 GDP-mannose mannosyl hydrolase WbdQ/WbhG compare
MCAODC_02175 yprA -3.0 -19.5 DEAD/DEAH box helicase compare
MCAODC_26315 pgm -2.9 -10.2 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
MCAODC_13715 -2.9 -8.1 Protein DedA compare
MCAODC_19425 -2.9 -1.8 Phage protein compare
MCAODC_08205 dusB -2.8 -10.3 tRNA dihydrouridine synthase DusB compare
MCAODC_06170 rfaP -2.8 -5.6 lipopolysaccharide core heptose(I) kinase RfaP compare
MCAODC_13910 nuoH -2.7 -5.7 NADH-quinone oxidoreductase subunit NuoH compare
MCAODC_04770 rfaH -2.7 -3.6 transcription/translation regulatory transformer protein RfaH compare
MCAODC_24120 -2.7 -1.8 Threonine-rich inner membrane protein GfcA compare
MCAODC_00860 dksA -2.7 -6.9 RNA polymerase-binding protein DksA compare
MCAODC_05060 rfbA -2.6 -9.5 glucose-1-phosphate thymidylyltransferase RfbA compare
MCAODC_13685 fabB -2.6 -1.9 beta-ketoacyl-ACP synthase I compare
MCAODC_16185 ynbB -2.6 -2.2 Uncharacterized protein YnbB compare
MCAODC_24060 -2.6 -1.2 YccE compare
MCAODC_16950 nleG2-3 -2.6 -2.4 DUF1076 domain-containing protein compare
MCAODC_00995 acnB -2.6 -2.5 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_21010 glpR -2.6 -1.2 transcriptional regulator compare
MCAODC_26145 sucA -2.5 -2.5 2-oxoglutarate dehydrogenase E1 component compare
MCAODC_26020 pal -2.5 -3.2 peptidoglycan-associated lipoprotein Pal compare
MCAODC_07455 glpD -2.5 -6.4 glycerol-3-phosphate dehydrogenase compare
MCAODC_01545 nhaA -2.5 -8.1 Na+/H+ antiporter NhaA compare
MCAODC_26030 tolA -2.5 -2.9 cell envelope integrity protein TolA compare
MCAODC_07640 aroK -2.4 -6.3 shikimate kinase AroK compare
MCAODC_15575 yciE -2.4 -1.1 Protein YciE compare
MCAODC_06955 pitA -2.4 -2.8 inorganic phosphate transporter PitA compare
MCAODC_19665 espR3 -2.3 -1.8 Type III secretion system effector espR3 compare
MCAODC_21030 gatA -2.3 -1.5 PTS galactitol transporter subunit IIA compare
MCAODC_22925 fabF -2.3 -1.4 beta-ketoacyl-ACP synthase II compare
MCAODC_02195 -2.3 -9.9 hypothetical protein compare
MCAODC_17965 ydhL -2.2 -1.7 Uncharacterized protein YdhL compare
MCAODC_01200 cra -2.2 -6.5 catabolite repressor/activator compare
MCAODC_10290 -2.2 -1.4 type III secretion protein compare
MCAODC_21900 dsbB -2.2 -1.8 disulfide bond formation protein DsbB compare
MCAODC_19155 nudB -2.2 -3.8 dihydroneopterin triphosphate diphosphatase compare
MCAODC_06320 mtlD -2.1 -4.1 mannitol-1-phosphate 5-dehydrogenase compare
MCAODC_14005 arnF -2.1 -5.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MCAODC_14730 yohO -2.0 -2.1 protein YohO compare
MCAODC_26040 tolQ -2.0 -1.3 Tol-Pal system protein TolQ compare
MCAODC_13240 -2.0 -3.7 Replication protein P compare
MCAODC_00045 rusA -2.0 -1.2 crossover junction endodeoxyribonuclease RusA compare
MCAODC_05285 mioC -2.0 -5.9 FMN-binding protein MioC compare
MCAODC_13895 nuoE -1.9 -2.0 NADH-quinone oxidoreductase subunit NuoE compare
MCAODC_27835 proC -1.9 -4.6 pyrroline-5-carboxylate reductase compare
MCAODC_09390 qseC -1.9 -4.9 two-component system sensor histidine kinase QseC compare
MCAODC_25840 -1.9 -1.2 DUF1382 domain-containing protein compare
MCAODC_13880 nuoA -1.9 -3.2 NADH-quinone oxidoreductase subunit NuoA compare
MCAODC_09835 speB -1.9 -6.8 agmatinase compare
MCAODC_23435 -1.9 -1.5 Oligogalacturonate-specific porin protein KdgM compare
MCAODC_09160 Ile2_trna -1.9 -2.1 tRNA-Ile2(cat) compare
MCAODC_26960 -1.9 -2.2 Immunity protein of metallopeptidase 4 toxin compare
MCAODC_17655 dmsD -1.8 -1.7 Tat proofreading chaperone DmsD compare
MCAODC_02190 yprA -1.8 -14.5 DEAD/DEAH box helicase compare
MCAODC_12720 ptsI -1.8 -2.0 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_14800 -1.8 -2.0 cruciferin compare
MCAODC_18095 -1.8 -1.3 Putative oxidoreductase Fe-S subunit compare
MCAODC_22880 -1.7 -1.7 DUF1425 domain-containing protein compare
MCAODC_13650 prmB -1.7 -8.1 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
MCAODC_18215 aroD -1.7 -1.3 3-dehydroquinate dehydratase compare
MCAODC_19835 hiuH -1.7 -2.1 hydroxyisourate hydrolase compare
MCAODC_09320 tolC -1.7 -6.3 outer membrane channel protein TolC compare
MCAODC_17245 iS285 -1.7 -2.3 IS256 family transposase compare
MCAODC_25435 glnQ -1.7 -3.4 glutamine ABC transporter ATP-binding protein GlnQ compare
MCAODC_14170 nrdA -1.7 -1.2 ribonucleoside-diphosphate reductase subunit alpha compare
MCAODC_13930 nuoL -1.6 -5.6 NADH-quinone oxidoreductase subunit L compare
MCAODC_01630 thrL -1.6 -1.8 thr operon leader peptide compare
MCAODC_17935 slyA -1.6 -2.7 transcriptional regulator SlyA compare
MCAODC_01350 rsmA -1.6 -1.9 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
MCAODC_23500 terZ -1.6 -2.7 tellurium resistance-associated protein TerZ compare
MCAODC_26815 fepC -1.6 -2.1 ferrienterobactin ABC transporter ATPase compare
MCAODC_03575 plsB -1.6 -0.9 glycerol-3-phosphate 1-O-acyltransferase PlsB compare
MCAODC_13885 nuoB -1.6 -4.3 NADH-quinone oxidoreductase subunit NuoB compare
MCAODC_25565 moaE -1.6 -1.0 molybdopterin synthase catalytic subunit MoaE compare
MCAODC_19890 -1.6 -1.2 Phage-related protein, tail protein J compare
MCAODC_21455 rusA -1.5 -0.9 Endodeoxyribonuclease RusA compare
MCAODC_19500 cysE -1.5 -1.7 serine acetyltransferase compare
MCAODC_00335 yafF -1.5 -1.9 ISAs1 family transposase compare
MCAODC_23625 ureE -1.5 -1.7 urease accessory protein UreE compare
MCAODC_05055 rffC -1.5 -4.5 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
MCAODC_23280 yeeS -1.5 -0.9 UPF0758 protein YeeS compare
MCAODC_10780 mazE -1.5 -1.3 type II toxin-antitoxin system antitoxin MazE compare
MCAODC_09085 higA -1.5 -1.1 type II toxin-antitoxin system antitoxin HigA compare
MCAODC_15360 -1.5 -1.0 hypothetical protein compare
MCAODC_04950 cyaA -1.5 -3.6 class I adenylate cyclase compare
MCAODC_03490 -1.5 -0.9 phage tail protein compare
MCAODC_00150 cII -1.5 -2.6 Transcriptional activator II compare
MCAODC_13235 -1.5 -2.5 Replication protein O compare
MCAODC_17775 ydgA -1.5 -1.8 Protein YdgA compare
MCAODC_22060 -1.5 -1.5 Ail/Lom family protein compare
MCAODC_23480 terD -1.5 -1.3 tellurium resistance membrane protein TerD compare
MCAODC_12815 Ala_trna -1.5 -2.2 tRNA-Ala(ggc) compare
MCAODC_09795 gshB -1.5 -4.1 glutathione synthase compare
MCAODC_22435 -1.5 -1.7 hypothetical protein compare
MCAODC_05050 rffA -1.4 -6.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MCAODC_18970 yebV -1.4 -1.5 Uncharacterized protein YebV compare
MCAODC_05420 -1.4 -1.6 Putative type III effector protein compare
MCAODC_07870 bfd -1.4 -2.0 bacterioferritin-associated ferredoxin compare
MCAODC_19355 yecR -1.4 -1.8 Uncharacterized protein YecR compare
MCAODC_22745 eCs1768 -1.4 -2.2 phage replisome organizer compare
MCAODC_24455 -1.4 -3.8 DUF977 domain-containing protein compare
MCAODC_22830 mfd -1.4 -4.9 transcription-repair coupling factor compare
MCAODC_12290 guaB -1.4 -2.6 IMP dehydrogenase compare
MCAODC_08895 -1.4 -2.2 YhaC family protein compare
MCAODC_13940 nuoN -1.4 -3.2 NADH-quinone oxidoreductase subunit NuoN compare
MCAODC_16810 glsB -1.4 -2.5 glutaminase B compare
MCAODC_13905 nuoG -1.4 -4.1 NADH-quinone oxidoreductase subunit NuoG compare
MCAODC_15860 pspA -1.4 -2.7 phage shock protein PspA compare
MCAODC_10375 ygeK -1.4 -2.0 Uncharacterized response regulatory protein YgeK compare
MCAODC_09825 speA -1.4 -4.4 biosynthetic arginine decarboxylase compare
MCAODC_05180 hdfR -1.3 -6.0 HTH-type transcriptional regulator HdfR compare
MCAODC_08220 yhdT -1.3 -1.4 Uncharacterized membrane protein YhdT compare
MCAODC_14505 psuG -1.3 -1.9 pseudouridine-5'-phosphate glycosidase compare
MCAODC_25705 -1.3 -2.6 phage minor tail protein G compare
MCAODC_22700 -1.3 -1.2 DUF551 domain-containing protein compare
MCAODC_13900 nuoF -1.3 -5.7 NADH-quinone oxidoreductase subunit NuoF compare
MCAODC_11465 -1.3 -3.5 DUF5508 domain-containing protein compare
MCAODC_13920 nuoJ -1.3 -3.3 NADH-quinone oxidoreductase subunit J compare
MCAODC_14885 ybcK -1.3 -1.1 Uncharacterized protein YbcK compare
MCAODC_23585 -1.3 -0.9 Membrane protein compare
MCAODC_16015 ynaI -1.3 -1.7 low conductance mechanosensitive channel YnaI compare
MCAODC_17035 -1.3 -1.0 head-tail connector protein compare
MCAODC_09425 ftsP -1.3 -1.7 cell division protein FtsP compare
MCAODC_05175 maoP -1.3 -4.9 macrodomain Ori organization protein MaoP compare
MCAODC_17865 rsxC -1.3 -6.0 electron transport complex subunit RsxC compare
MCAODC_11660 rnfH -1.3 -2.4 RnfH family protein compare
MCAODC_18195 ydiL -1.3 -1.1 Uncharacterized protein YdiL compare
MCAODC_17920 mliC -1.3 -1.0 C-type lysozyme inhibitor compare
MCAODC_24420 ydiL -1.3 -1.5 CPBP family intramembrane metalloprotease compare
MCAODC_12145 iscR -1.3 -2.3 Fe-S cluster assembly transcriptional regulator IscR compare
MCAODC_23985 -1.3 -2.7 hypothetical protein compare
MCAODC_17670 mlc -1.3 -2.8 DNA-binding transcriptional repressor Mlc compare
MCAODC_27555 clpX -1.3 -2.0 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_14980 -1.3 -1.1 SAR-endolysin compare
MCAODC_14490 fruB -1.3 -2.1 fused PTS fructose transporter subunit IIA/HPr protein compare
MCAODC_23290 -1.3 -1.8 DUF945 domain-containing protein compare
MCAODC_00020 rzpD -1.3 -3.0 prophage endopeptidase RzpD compare
MCAODC_27545 -1.2 -2.9 Lon protease compare
MCAODC_23520 -1.2 -4.7 Phosphoribosyl transferase (PRTase) compare
MCAODC_21850 ychF -1.2 -0.7 redox-regulated ATPase YchF compare
MCAODC_22975 rluC -1.2 -3.7 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
MCAODC_23510 -1.2 -4.5 adenine/guanine phosphoribosyltransferase compare
MCAODC_22960 yceD -1.2 -1.9 23S rRNA accumulation protein YceD compare
MCAODC_20375 sbcB -1.2 -2.3 exodeoxyribonuclease I compare
MCAODC_14010 arnE -1.2 -3.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MCAODC_10075 sdhE -1.2 -0.8 FAD assembly factor SdhE compare
MCAODC_02450 fbp -1.2 -5.8 class 1 fructose-bisphosphatase compare
MCAODC_20805 -1.2 -1.1 Phage tail assembly chaperone proteins, E, or 41 or 14 compare
MCAODC_12495 ypfM -1.2 -1.6 protein YpfM compare
MCAODC_14285 -1.2 -1.3 hypothetical protein compare
MCAODC_23810 -1.2 -1.9 acyl carrier protein compare
MCAODC_05685 -1.2 -2.3 hypothetical protein compare
MCAODC_19825 hprS -1.2 -2.5 two-component system sensor histidine kinase HprS compare
MCAODC_13935 nuoM -1.2 -3.8 NADH-quinone oxidoreductase subunit M compare
MCAODC_19775 yodC -1.2 -2.1 Uncharacterized protein YodC compare
MCAODC_17155 -1.2 -1.1 Prophage protein compare
MCAODC_17200 -1.2 -1.7 DUF1391 domain-containing protein compare
MCAODC_10645 gcvA -1.2 -5.8 glycine cleavage system transcriptional regulator GcvA compare
MCAODC_17055 -1.1 -2.4 Peptidase U35, phage prohead HK97 compare
MCAODC_24080 torD -1.1 -2.3 molecular chaperone TorD compare
MCAODC_04760 fre -1.1 -4.2 NAD(P)H-flavin reductase compare
MCAODC_04275 glpK -1.1 -6.3 glycerol kinase GlpK compare
MCAODC_22980 rne -1.1 -1.8 ribonuclease E compare
MCAODC_22620 -1.1 -1.7 hypothetical protein compare


Specific Phenotypes

For 7 genes in this experiment

For phage Phage in Escherichia coli ECRC101

For phage Phage across organisms