Experiment set4S344 for Escherichia coli ECRC101

Compare to:

Bas61

200 most important genes:

  gene name fitness t score description  
MCAODC_28370 -4.4 -3.1 hypothetical protein compare
MCAODC_04655 -4.3 -1.3 hypothetical protein compare
MCAODC_08130 Thr_trna -3.9 -1.2 tRNA-Thr(ggt) compare
MCAODC_18125 lpp -3.8 -1.2 murein lipoprotein Lpp compare
MCAODC_08450 ptsN -3.7 -2.5 PTS IIA-like nitrogen regulatory protein PtsN compare
MCAODC_26025 tolB -3.6 -5.5 Tol-Pal system protein TolB compare
MCAODC_00995 acnB -3.4 -2.4 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_06955 pitA -3.3 -3.2 inorganic phosphate transporter PitA compare
MCAODC_22410 -3.3 -2.7 hypothetical protein compare
MCAODC_01560 dnaJ -3.2 -2.7 molecular chaperone DnaJ compare
MCAODC_24060 -3.1 -1.4 YccE compare
MCAODC_21675 rssB -3.1 -5.1 two-component system response regulator RssB compare
MCAODC_27555 clpX -3.0 -2.9 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_04590 typA -3.0 -11.3 ribosome-dependent GTPase TypA compare
MCAODC_20480 cpsG -2.9 -2.4 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_25785 -2.8 -1.5 DUF3927 domain-containing protein compare
MCAODC_12720 ptsI -2.8 -2.3 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_22960 yceD -2.6 -4.1 23S rRNA accumulation protein YceD compare
MCAODC_26040 tolQ -2.5 -1.6 Tol-Pal system protein TolQ compare
MCAODC_23435 -2.5 -1.8 Oligogalacturonate-specific porin protein KdgM compare
MCAODC_03490 -2.4 -1.1 phage tail protein compare
MCAODC_26020 pal -2.4 -4.3 peptidoglycan-associated lipoprotein Pal compare
MCAODC_09425 ftsP -2.4 -2.3 cell division protein FtsP compare
MCAODC_05995 -2.4 -1.0 toxin compare
MCAODC_21010 glpR -2.3 -1.2 transcriptional regulator compare
MCAODC_04375 rhaT -2.2 -1.4 L-rhamnose/proton symporter RhaT compare
MCAODC_19425 -2.2 -2.6 Phage protein compare
MCAODC_01360 apaH -2.2 -1.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
MCAODC_23280 yeeS -2.1 -1.1 UPF0758 protein YeeS compare
MCAODC_24055 -2.0 -2.0 YccE compare
MCAODC_11890 srmB -2.0 -5.4 ATP-dependent RNA helicase SrmB compare
MCAODC_19430 -2.0 -3.3 hypothetical protein compare
MCAODC_13240 -2.0 -1.9 Replication protein P compare
MCAODC_15025 -1.9 -1.6 recombinase RecA compare
MCAODC_17965 ydhL -1.9 -1.7 Uncharacterized protein YdhL compare
MCAODC_21900 dsbB -1.9 -1.9 disulfide bond formation protein DsbB compare
MCAODC_19355 yecR -1.9 -3.1 Uncharacterized protein YecR compare
MCAODC_06175 waaO -1.8 -3.7 lipopolysaccharide 3-alpha-galactosyltransferase compare
MCAODC_07640 aroK -1.8 -4.0 shikimate kinase AroK compare
MCAODC_06185 rfaJ -1.7 -4.9 glucosyltransferase compare
MCAODC_19365 yecH -1.7 -2.0 Uncharacterized protein YecH compare
MCAODC_25120 -1.7 -2.0 hypothetical protein compare
MCAODC_18755 yoaJ -1.7 -1.5 protein YoaJ compare
MCAODC_19215 yecM -1.7 -2.6 VOC family protein compare
MCAODC_10335 csgD -1.7 -1.3 LuxR family transcriptional regulator compare
MCAODC_14915 rusA -1.6 -1.7 crossover junction endodeoxyribonuclease RusA compare
MCAODC_20355 yeeX -1.6 -1.6 DUF496 domain-containing protein compare
MCAODC_22745 eCs1768 -1.6 -1.5 phage replisome organizer compare
MCAODC_21155 metG -1.6 -1.7 methionine--tRNA ligase compare
MCAODC_08900 yhaB -1.6 -1.0 Uncharacterized protein YhaB compare
MCAODC_15950 ycjW -1.6 -3.6 Uncharacterized HTH-type transcriptional regulator YcjW compare
MCAODC_06105 pyrL -1.5 -1.5 Putative PyrE leader peptide compare
MCAODC_15430 sopA -1.5 -2.8 plasmid-partitioning protein SopA compare
MCAODC_21140 fimA -1.5 -1.0 Uncharacterized fimbrial-like protein YehD compare
MCAODC_01260 -1.5 -1.5 hypothetical protein compare
MCAODC_01515 fimA -1.5 -1.3 fimbrial protein compare
MCAODC_01520 fimC -1.5 -1.4 molecular chaperone compare
MCAODC_19225 yecT -1.5 -1.3 Uncharacterized protein YecT compare
MCAODC_13895 nuoE -1.5 -1.5 NADH-quinone oxidoreductase subunit NuoE compare
MCAODC_15400 ccdB -1.4 -0.8 type II toxin-antitoxin system toxin CcdB compare
MCAODC_17625 ynfC -1.4 -1.8 YnfC family lipoprotein compare
MCAODC_24205 -1.4 -1.5 hypothetical protein compare
MCAODC_20485 manC2 -1.4 -1.2 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_19435 marR -1.4 -2.1 MarR family transcriptional regulator compare
MCAODC_20900 -1.4 -1.3 phage tail protein compare
MCAODC_14475 yeiW -1.4 -2.1 UPF0153 protein YeiW compare
MCAODC_26145 sucA -1.4 -2.5 2-oxoglutarate dehydrogenase E1 component compare
MCAODC_18440 chbA -1.4 -1.2 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
MCAODC_19890 -1.4 -1.2 Phage-related protein, tail protein J compare
MCAODC_13935 nuoM -1.4 -3.2 NADH-quinone oxidoreductase subunit M compare
MCAODC_09085 higA -1.4 -1.0 type II toxin-antitoxin system antitoxin HigA compare
MCAODC_11310 emrR -1.3 -3.0 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
MCAODC_20145 -1.3 -1.7 DUF1391 domain-containing protein compare
MCAODC_20805 -1.3 -1.2 Phage tail assembly chaperone proteins, E, or 41 or 14 compare
MCAODC_28140 yahO -1.3 -1.9 DUF1471 domain-containing protein compare
MCAODC_05825 grlR -1.3 -1.1 type III secretion system LEE GrlA-binding negative regulator GrlR compare
MCAODC_13840 yfbV -1.3 -3.4 UPF0208 membrane protein YfbV compare
MCAODC_08445 rapZ -1.3 -5.0 RNase adapter RapZ compare
MCAODC_24855 ihfB -1.3 -0.9 integration host factor subunit beta compare
MCAODC_15940 ycjV -1.3 -1.2 Uncharacterized ABC transporter ATP-binding protein YcjV compare
MCAODC_04060 sthA -1.3 -5.2 Si-specific NAD(P)(+) transhydrogenase compare
MCAODC_13915 nuoI -1.3 -1.7 NADH-quinone oxidoreductase subunit NuoI compare
MCAODC_24120 -1.3 -1.1 Threonine-rich inner membrane protein GfcA compare
MCAODC_24625 ompA -1.2 -4.0 outer membrane protein A compare
MCAODC_23300 -1.2 -0.8 chemotaxis protein compare
MCAODC_01350 rsmA -1.2 -1.5 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
MCAODC_16415 mcbR -1.2 -2.0 colanic acid/biofilm transcriptional regulator McbR compare
MCAODC_15170 putA1 -1.2 -1.6 CopG family transcriptional regulator compare
MCAODC_18195 ydiL -1.2 -1.4 Uncharacterized protein YdiL compare
MCAODC_07455 glpD -1.2 -3.1 glycerol-3-phosphate dehydrogenase compare
MCAODC_11200 srlB -1.2 -1.4 PTS glucitol/sorbitol transporter subunit IIA compare
MCAODC_13885 nuoB -1.2 -3.7 NADH-quinone oxidoreductase subunit NuoB compare
MCAODC_04480 yiiE -1.2 -1.7 Uncharacterized protein YiiE compare
MCAODC_15150 repA2 -1.2 -5.8 Replication regulatory protein repA2 compare
MCAODC_06190 rfaB -1.2 -3.7 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_26960 -1.1 -1.8 Immunity protein of metallopeptidase 4 toxin compare
MCAODC_23000 flgI -1.1 -3.4 flagellar basal body P-ring protein FlgI compare
MCAODC_15740 -1.1 -1.7 EAL domain-containing protein compare
MCAODC_17740 ydgC -1.1 -2.3 Inner membrane protein YdgC compare
MCAODC_08200 fis -1.1 -1.3 DNA-binding transcriptional regulator Fis compare
MCAODC_22475 -1.1 -1.2 hypothetical protein compare
MCAODC_26705 yldA -1.1 -1.7 Protein YldA compare
MCAODC_21600 clsA -1.1 -1.4 cardiolipin synthase ClsA compare
MCAODC_21305 -1.1 -1.0 phage tail tape measure protein compare
MCAODC_26175 ybgU -1.1 -2.9 Protein YbgU compare
MCAODC_17175 -1.1 -1.2 replication protein compare
MCAODC_24355 -1.1 -2.0 SAR-endolysin compare
MCAODC_17875 rsxG -1.1 -1.5 electron transport complex subunit RsxG compare
MCAODC_25500 espX2 -1.1 -1.0 type III secretion system effector EspX2 compare
MCAODC_18115 fumD -1.0 -1.5 fumarate hydratase FumD compare
MCAODC_12145 iscR -1.0 -2.2 Fe-S cluster assembly transcriptional regulator IscR compare
MCAODC_08640 rbfA -1.0 -1.4 30S ribosome-binding factor RbfA compare
MCAODC_17280 nleG2-4 -1.0 -2.5 DUF1076 domain-containing protein compare
MCAODC_11320 ygaZ -1.0 -3.3 L-valine exporter subunit YgaZ compare
MCAODC_16105 uspF -1.0 -1.3 universal stress protein UspF compare
MCAODC_10025 pepP -1.0 -3.7 Xaa-Pro aminopeptidase compare
MCAODC_24775 aspC -1.0 -1.5 aspartate transaminase compare
MCAODC_12235 ndk -1.0 -1.6 nucleoside-diphosphate kinase compare
MCAODC_00460 -1.0 -1.9 hypothetical protein compare
MCAODC_24015 rutD -1.0 -1.2 pyrimidine utilization protein D compare
MCAODC_22030 yciE -1.0 -0.6 Protein YciF compare
MCAODC_22505 nleL -1.0 -1.9 type III secretion system effector E3 ubiquitin ligase NleL compare
MCAODC_27385 ybaB -1.0 -1.2 YbaB/EbfC family nucleoid-associated protein compare
MCAODC_10330 flhB -1.0 -0.9 EscU/YscU/HrcU family type III secretion system export apparatus switch protein compare
MCAODC_26030 tolA -1.0 -1.3 cell envelope integrity protein TolA compare
MCAODC_05955 escG -1.0 -0.8 type III secretion system LEE needle protein cochaperone EscG compare
MCAODC_06305 yibL -1.0 -1.9 YibL family ribosome-associated protein compare
MCAODC_13325 -1.0 -1.1 protein NinG compare
MCAODC_13920 nuoJ -0.9 -2.7 NADH-quinone oxidoreductase subunit J compare
MCAODC_15635 rluB -0.9 -1.8 23S rRNA pseudouridine(2605) synthase RluB compare
MCAODC_20860 -0.9 -2.6 Spike protein compare
MCAODC_01530 fimD -0.9 -1.5 fimbrial assembly protein compare
MCAODC_27560 clpP -0.9 -0.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
MCAODC_01795 prfC -0.9 -4.4 peptide chain release factor 3 compare
MCAODC_09320 tolC -0.9 -3.8 outer membrane channel protein TolC compare
MCAODC_20200 rfaF -0.9 -1.9 Glycosyltransferase family 9 (heptosyltransferase) compare
MCAODC_20375 sbcB -0.9 -2.0 exodeoxyribonuclease I compare
MCAODC_19520 -0.9 -1.5 phage tail protein compare
MCAODC_13710 truA -0.9 -1.9 aspartate-semialdehyde dehydrogenase compare
MCAODC_18215 aroD -0.9 -1.5 3-dehydroquinate dehydratase compare
MCAODC_09620 -0.9 -1.0 adherence protein compare
MCAODC_02435 yjgA -0.9 -3.2 ribosome-associated protein compare
MCAODC_22495 -0.9 -0.6 CP4-44 prophage putative disrupted hemin or colicin receptor compare
MCAODC_19090 lpxM -0.9 -2.5 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
MCAODC_17630 -0.9 -2.6 DUF1161 domain-containing protein compare
MCAODC_07005 hicB -0.9 -2.3 toxin-antitoxin system HicB family antitoxin compare
MCAODC_26815 fepC -0.9 -1.7 ferrienterobactin ABC transporter ATPase compare
MCAODC_19460 -0.9 -1.2 Phage protein compare
MCAODC_11315 ygaH -0.9 -2.1 L-valine transporter subunit YgaH compare
MCAODC_15750 rnb -0.9 -2.3 exoribonuclease II compare
MCAODC_00465 -0.9 -0.8 hypothetical protein compare
MCAODC_04760 fre -0.9 -2.8 NAD(P)H-flavin reductase compare
MCAODC_14320 napH -0.9 -2.7 quinol dehydrogenase ferredoxin subunit NapH compare
MCAODC_17055 -0.9 -1.9 Peptidase U35, phage prohead HK97 compare
MCAODC_16830 yneK -0.9 -1.6 putative protein YneK compare
MCAODC_18475 ves -0.9 -1.4 environmental stress-induced protein Ves compare
MCAODC_27490 glnK -0.9 -2.0 P-II family nitrogen regulator compare
MCAODC_16675 ydeM -0.9 -0.7 anaerobic sulfatase maturase compare
MCAODC_15815 -0.9 -1.5 DUF2543 domain-containing protein compare
MCAODC_00035 -0.9 -2.7 Antitermination protein Q compare
MCAODC_12815 Ala_trna -0.9 -1.4 tRNA-Ala(ggc) compare
MCAODC_05175 maoP -0.9 -2.5 macrodomain Ori organization protein MaoP compare
MCAODC_05575 yidQ -0.9 -1.5 Uncharacterized protein YidQ compare
MCAODC_05850 escJ -0.9 -1.3 type III secretion system LEE inner membrane ring protein EscJ compare
MCAODC_12290 guaB -0.9 -2.3 IMP dehydrogenase compare
MCAODC_11285 gshA -0.9 -3.5 glutamate--cysteine ligase compare
MCAODC_15655 yciN -0.9 -1.2 Protein YciN compare
MCAODC_04330 pfkA -0.8 -0.6 6-phosphofructokinase compare
MCAODC_16775 lsrF -0.8 -1.5 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
MCAODC_20165 -0.8 -2.8 DUF4224 domain-containing protein compare
MCAODC_13930 nuoL -0.8 -3.4 NADH-quinone oxidoreductase subunit L compare
MCAODC_20975 -0.8 -1.9 Replication gene B protein compare
MCAODC_16335 sutR -0.8 -1.2 DNA-binding transcriptional regulator SutR compare
MCAODC_02720 yjfJ -0.8 -2.8 Uncharacterized protein YjfJ compare
MCAODC_11365 nrdH -0.8 -2.2 glutaredoxin-like protein NrdH compare
MCAODC_19850 zinT -0.8 -1.5 metal-binding protein ZinT compare
MCAODC_08895 -0.8 -1.5 YhaC family protein compare
MCAODC_11380 ygaM -0.8 -2.3 Uncharacterized protein YgaM compare
MCAODC_17955 sodC -0.8 -1.4 superoxide dismutase [Cu-Zn] SodC compare
MCAODC_13910 nuoH -0.8 -2.4 NADH-quinone oxidoreductase subunit NuoH compare
MCAODC_13905 nuoG -0.8 -3.5 NADH-quinone oxidoreductase subunit NuoG compare
MCAODC_05100 trxA -0.8 -2.2 thioredoxin TrxA compare
MCAODC_19455 -0.8 -0.9 derepression protein compare
MCAODC_22980 rne -0.8 -1.5 ribonuclease E compare
MCAODC_04950 cyaA -0.8 -1.8 class I adenylate cyclase compare
MCAODC_18040 cfa -0.8 -2.1 cyclopropane fatty acyl phospholipid synthase compare
MCAODC_06440 baxL -0.8 -1.1 Putative translational regulatory protein BaxL compare
MCAODC_18570 gdhA -0.8 -1.1 NADP-specific glutamate dehydrogenase compare
MCAODC_22110 -0.8 -1.0 Tail tube terminator protein compare
MCAODC_07645 aroB -0.8 -3.4 3-dehydroquinate synthase compare
MCAODC_16035 ogt -0.8 -0.9 methylated-DNA--[protein]-cysteine S-methyltransferase compare
MCAODC_05400 pstB -0.8 -1.0 phosphate ABC transporter ATP-binding protein PstB compare
MCAODC_13455 -0.8 -1.1 hypothetical protein compare
MCAODC_06650 -0.8 -0.7 Type I toxin-antitoxin system toxin Ldr family protein compare
MCAODC_19685 fliG -0.8 -1.3 flagellar motor switch protein FliG compare
MCAODC_24145 etp -0.8 -2.3 protein-tyrosine-phosphatase Etp compare
MCAODC_14730 yohO -0.8 -0.9 protein YohO compare
MCAODC_18530 ynjA -0.8 -1.3 Uncharacterized protein YnjA compare
MCAODC_20980 -0.8 -2.3 Phage protein B compare
MCAODC_28510 -0.8 -2.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECRC101 in phage experiments

For phage Phage across organisms