Experiment set4S325 for Bosea sp. OAE506

Compare to:

Ying_all64 rep A; time point 1

200 most detrimental genes:

  gene name fitness t score description  
ABIE41_RS08030 +2.0 3.3 glutaredoxin 3 compare
ABIE41_RS19375 +1.5 7.1 N-acetylmuramidase domain-containing protein compare
ABIE41_RS00825 +1.1 2.4 hypothetical protein compare
ABIE41_RS09055 +0.9 1.8 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS14905 +0.9 1.3 type II toxin-antitoxin system VapC family toxin compare
ABIE41_RS16505 +0.9 1.0 ABC transporter ATP-binding protein compare
ABIE41_RS19620 +0.8 4.0 hypothetical protein compare
ABIE41_RS08330 +0.8 2.8 N-acetyltransferase compare
ABIE41_RS04305 +0.8 1.5 tRNA-Gly compare
ABIE41_RS03955 +0.8 3.5 imidazole glycerol phosphate synthase subunit HisH compare
ABIE41_RS11505 +0.7 1.2 pyridoxamine 5'-phosphate oxidase family protein compare
ABIE41_RS23125 +0.7 1.6 DUF4170 domain-containing protein compare
ABIE41_RS24015 +0.7 5.3 histidinol dehydrogenase compare
ABIE41_RS22200 +0.7 1.9 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS12065 +0.7 1.6 methyl-accepting chemotaxis protein compare
ABIE41_RS05410 +0.7 0.9 flagellar motor switch protein FliN compare
ABIE41_RS19390 +0.7 4.2 hypothetical protein compare
ABIE41_RS10235 +0.7 1.3 pyridoxamine 5'-phosphate oxidase compare
ABIE41_RS00230 +0.7 2.3 alpha-ketoglutarate-dependent dioxygenase AlkB compare
ABIE41_RS05225 +0.6 2.4 phosphoribosyl-ATP diphosphatase compare
ABIE41_RS19340 +0.6 2.8 hypothetical protein compare
ABIE41_RS16950 +0.6 1.8 MmcQ/YjbR family DNA-binding protein compare
ABIE41_RS12735 +0.6 1.3 hypothetical protein compare
ABIE41_RS19430 +0.6 3.5 hypothetical protein compare
ABIE41_RS07380 +0.6 1.5 hypothetical protein compare
ABIE41_RS06285 +0.6 3.0 pyruvate kinase compare
ABIE41_RS19415 +0.6 2.9 hypothetical protein compare
ABIE41_RS08535 +0.6 3.7 histidinol-phosphatase compare
ABIE41_RS18580 +0.6 2.0 GntR family transcriptional regulator compare
ABIE41_RS11020 +0.6 2.4 hypothetical protein compare
ABIE41_RS00915 +0.6 1.8 hypothetical protein compare
ABIE41_RS02005 +0.6 1.2 hypothetical protein compare
ABIE41_RS16270 +0.6 1.3 hypothetical protein compare
ABIE41_RS21520 +0.6 2.7 gene transfer agent family protein compare
ABIE41_RS22120 +0.6 2.9 ATP phosphoribosyltransferase compare
ABIE41_RS18555 +0.6 1.7 hypothetical protein compare
ABIE41_RS23765 +0.6 4.6 histidinol-phosphate transaminase compare
ABIE41_RS19545 +0.6 0.7 hypothetical protein compare
ABIE41_RS16330 +0.6 1.1 xanthine dehydrogenase family protein subunit M compare
ABIE41_RS02810 +0.6 2.9 MarR family winged helix-turn-helix transcriptional regulator compare
ABIE41_RS19380 +0.6 3.2 DUF4376 domain-containing protein compare
ABIE41_RS09290 +0.6 1.0 DUF465 domain-containing protein compare
ABIE41_RS21695 +0.5 2.2 TIGR03808 family TAT-translocated repetitive protein compare
ABIE41_RS13490 +0.5 2.0 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE41_RS19405 +0.5 2.1 phage baseplate assembly protein compare
ABIE41_RS20865 +0.5 0.8 hypothetical protein compare
ABIE41_RS05535 +0.5 0.8 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS17230 +0.5 1.0 aspartate carbamoyltransferase catalytic subunit compare
ABIE41_RS19425 +0.5 4.1 Rha family transcriptional regulator compare
ABIE41_RS21350 +0.5 2.6 urease accessory protein UreG compare
ABIE41_RS15830 +0.5 1.0 AMP-binding protein compare
ABIE41_RS04445 +0.5 1.8 ATP-dependent protease ATPase subunit HslU compare
ABIE41_RS12475 +0.5 2.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABIE41_RS03815 +0.5 2.5 phosphoribosyl-ATP diphosphatase compare
ABIE41_RS13485 +0.5 1.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS11030 +0.5 1.2 TIGR01459 family HAD-type hydrolase compare
ABIE41_RS13460 +0.5 1.7 RNA polymerase-binding protein DksA compare
ABIE41_RS12980 +0.5 1.4 NUDIX hydrolase compare
ABIE41_RS18085 +0.5 2.2 gluconokinase compare
ABIE41_RS22670 +0.5 2.6 LysR substrate-binding domain-containing protein compare
ABIE41_RS02950 +0.5 4.5 methyltransferase domain-containing protein compare
ABIE41_RS08995 +0.5 1.4 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD compare
ABIE41_RS13425 +0.5 2.1 flagellar basal body P-ring formation chaperone FlgA compare
ABIE41_RS18445 +0.5 1.7 GntR family transcriptional regulator compare
ABIE41_RS20435 +0.5 1.9 four-carbon acid sugar kinase family protein compare
ABIE41_RS09120 +0.5 2.4 ABC transporter permease compare
ABIE41_RS16805 +0.5 0.9 CinA family protein compare
ABIE41_RS05165 +0.5 2.4 hypothetical protein compare
ABIE41_RS09865 +0.5 2.7 hydratase compare
ABIE41_RS05815 +0.5 0.7 GTP-binding protein compare
ABIE41_RS19555 +0.5 2.2 LexA family transcriptional regulator compare
ABIE41_RS00195 +0.5 2.3 ABC transporter permease compare
ABIE41_RS02715 +0.5 1.0 nucleotidyltransferase family protein compare
ABIE41_RS10035 +0.5 1.0 transcriptional regulator PpsR compare
ABIE41_RS19395 +0.5 2.6 baseplate J/gp47 family protein compare
ABIE41_RS21225 +0.5 1.5 glutathione S-transferase compare
ABIE41_RS08395 +0.5 1.4 response regulator compare
ABIE41_RS04780 +0.5 3.4 NAD-glutamate dehydrogenase compare
ABIE41_RS12915 +0.5 1.1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein compare
ABIE41_RS17840 +0.5 1.7 hypothetical protein compare
ABIE41_RS19385 +0.4 3.9 hypothetical protein compare
ABIE41_RS09465 +0.4 1.1 sulfite exporter TauE/SafE family protein compare
ABIE41_RS14425 +0.4 1.6 hypothetical protein compare
ABIE41_RS04790 +0.4 1.9 DUF2794 domain-containing protein compare
ABIE41_RS23080 +0.4 2.0 LysR substrate-binding domain-containing protein compare
ABIE41_RS19410 +0.4 1.5 hypothetical protein compare
ABIE41_RS08560 +0.4 0.8 MAPEG family protein compare
ABIE41_RS07725 +0.4 2.7 TetR/AcrR family transcriptional regulator compare
ABIE41_RS06410 +0.4 0.7 FCD domain-containing protein compare
ABIE41_RS09610 +0.4 1.6 SDR family NAD(P)-dependent oxidoreductase compare
ABIE41_RS19360 +0.4 2.2 hypothetical protein compare
ABIE41_RS22790 +0.4 2.0 cytochrome ubiquinol oxidase subunit I compare
ABIE41_RS14760 +0.4 0.9 rhodanese-like domain-containing protein compare
ABIE41_RS11420 +0.4 1.5 molybdopterin converting factor subunit 1 compare
ABIE41_RS12955 +0.4 1.8 HWE histidine kinase domain-containing protein compare
ABIE41_RS18610 +0.4 0.9 DUF4112 domain-containing protein compare
ABIE41_RS20640 +0.4 2.8 tripartite tricarboxylate transporter permease compare
ABIE41_RS19560 +0.4 1.7 hypothetical protein compare
ABIE41_RS19470 +0.4 2.5 hypothetical protein compare
ABIE41_RS13175 +0.4 1.4 XRE family transcriptional regulator compare
ABIE41_RS15620 +0.4 1.9 alanyl-tRNA editing protein compare
ABIE41_RS13405 +0.4 2.4 flagellar motor switch protein FliM compare
ABIE41_RS19475 +0.4 2.1 hypothetical protein compare
ABIE41_RS15935 +0.4 0.6 class I SAM-dependent methyltransferase compare
ABIE41_RS18200 +0.4 1.2 glycerophosphodiester phosphodiesterase family protein compare
ABIE41_RS19420 +0.4 1.9 DNA circularization N-terminal domain-containing protein compare
ABIE41_RS09670 +0.4 0.8 hypothetical protein compare
ABIE41_RS20580 +0.4 0.9 hypothetical protein compare
ABIE41_RS00660 +0.4 1.8 hypothetical protein compare
ABIE41_RS13950 +0.4 1.0 LysR family transcriptional regulator compare
ABIE41_RS17155 +0.4 2.3 adenine deaminase compare
ABIE41_RS13295 +0.4 1.0 flagellar assembly protein FliX compare
ABIE41_RS14475 +0.4 2.0 cytochrome b/b6 domain-containing protein compare
ABIE41_RS04380 +0.4 1.6 glycosyltransferase family 4 protein compare
ABIE41_RS15135 +0.4 2.8 flagellar motor stator protein MotA compare
ABIE41_RS07465 +0.4 1.0 helix-turn-helix domain-containing protein compare
ABIE41_RS10865 +0.4 2.1 flagellar hook capping FlgD N-terminal domain-containing protein compare
ABIE41_RS19440 +0.4 3.1 hypothetical protein compare
ABIE41_RS13140 +0.4 2.3 TRAP transporter small permease compare
ABIE41_RS13420 +0.4 1.9 flagellar basal-body rod protein FlgG compare
ABIE41_RS19450 +0.4 2.7 hypothetical protein compare
ABIE41_RS04835 +0.4 2.1 RNA pseudouridine synthase compare
ABIE41_RS13340 +0.4 1.2 P1 family peptidase compare
ABIE41_RS01040 +0.4 2.1 DUF2171 domain-containing protein compare
ABIE41_RS17845 +0.4 1.8 peptidylprolyl isomerase compare
ABIE41_RS11160 +0.4 1.5 DUF6111 family protein compare
ABIE41_RS00655 +0.4 0.8 hypothetical protein compare
ABIE41_RS17830 +0.4 1.7 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
ABIE41_RS20645 +0.4 1.0 tripartite tricarboxylate transporter TctB family protein compare
ABIE41_RS20715 +0.4 2.0 branched-chain amino acid ABC transporter permease compare
ABIE41_RS21150 +0.4 1.1 DMT family transporter compare
ABIE41_RS09345 +0.4 1.7 ABC transporter transmembrane domain-containing protein compare
ABIE41_RS11750 +0.4 1.2 HAD family phosphatase compare
ABIE41_RS10315 +0.4 1.6 hypothetical protein compare
ABIE41_RS19495 +0.4 2.4 phage portal protein compare
ABIE41_RS14135 +0.4 0.5 MaoC family dehydratase compare
ABIE41_RS12380 +0.4 1.4 hypothetical protein compare
ABIE41_RS04140 +0.4 1.6 hypothetical protein compare
ABIE41_RS22335 +0.4 1.9 hypothetical protein compare
ABIE41_RS10675 +0.4 1.0 amino acid ABC transporter ATP-binding protein compare
ABIE41_RS05885 +0.4 0.7 nitrile hydratase accessory protein compare
ABIE41_RS12715 +0.4 0.9 50S ribosomal protein L11 methyltransferase compare
ABIE41_RS14695 +0.4 1.1 hypothetical protein compare
ABIE41_RS20700 +0.4 2.3 carboxymuconolactone decarboxylase family protein compare
ABIE41_RS11485 +0.4 1.3 glutathione S-transferase compare
ABIE41_RS11795 +0.4 1.9 hypothetical protein compare
ABIE41_RS16605 +0.4 2.4 isocitrate lyase/PEP mutase family protein compare
ABIE41_RS22315 +0.4 1.9 LysR family transcriptional regulator compare
ABIE41_RS20625 +0.4 2.2 phosphonate ABC transporter ATP-binding protein compare
ABIE41_RS19485 +0.3 1.3 DUF2190 family protein compare
ABIE41_RS11670 +0.3 0.7 50S ribosomal protein L19 compare
ABIE41_RS15710 +0.3 2.2 LrgB family protein compare
ABIE41_RS15275 +0.3 1.7 formate dehydrogenase accessory sulfurtransferase FdhD compare
ABIE41_RS09285 +0.3 0.8 aa3-type cytochrome c oxidase subunit IV compare
ABIE41_RS02655 +0.3 0.9 ABC transporter ATP-binding protein compare
ABIE41_RS14805 +0.3 1.3 FliM/FliN family flagellar motor switch protein compare
ABIE41_RS02640 +0.3 1.8 Lrp/AsnC family transcriptional regulator compare
ABIE41_RS21900 +0.3 1.2 ABC transporter permease compare
ABIE41_RS20630 +0.3 1.0 phosphonate ABC transporter, permease protein PhnE compare
ABIE41_RS21870 +0.3 0.4 hypothetical protein compare
ABIE41_RS14055 +0.3 1.6 SDR family oxidoreductase compare
ABIE41_RS04110 +0.3 0.7 hypothetical protein compare
ABIE41_RS22325 +0.3 2.3 MDR family oxidoreductase compare
ABIE41_RS03120 +0.3 1.1 hypothetical protein compare
ABIE41_RS19480 +0.3 2.7 hypothetical protein compare
ABIE41_RS18385 +0.3 1.9 polysaccharide deacetylase compare
ABIE41_RS17680 +0.3 1.8 NADP-dependent oxidoreductase compare
ABIE41_RS22645 +0.3 1.1 phasin compare
ABIE41_RS03480 +0.3 1.1 hypothetical protein compare
ABIE41_RS08785 +0.3 1.6 Swt1 family HEPN domain-containing protein compare
ABIE41_RS05135 +0.3 1.7 BtpA/SgcQ family protein compare
ABIE41_RS09050 +0.3 1.6 type II toxin-antitoxin system RelE/ParE family toxin compare
ABIE41_RS22530 +0.3 1.6 TerC family protein compare
ABIE41_RS19515 +0.3 1.5 hypothetical protein compare
ABIE41_RS15480 +0.3 1.7 helix-turn-helix domain-containing protein compare
ABIE41_RS19345 +0.3 1.1 HNH endonuclease signature motif containing protein compare
ABIE41_RS04655 +0.3 0.7 Maf family protein compare
ABIE41_RS17185 +0.3 1.0 GntR family transcriptional regulator compare
ABIE41_RS19705 +0.3 1.5 ubiquinol-cytochrome C chaperone family protein compare
ABIE41_RS04260 +0.3 1.3 TAXI family TRAP transporter solute-binding subunit compare
ABIE41_RS11460 +0.3 0.9 type II toxin-antitoxin system ParD family antitoxin compare
ABIE41_RS14040 +0.3 1.4 patatin-like phospholipase family protein compare
ABIE41_RS03800 +0.3 1.8 carbonic anhydrase compare
ABIE41_RS11400 +0.3 1.1 MarR family transcriptional regulator compare
ABIE41_RS23190 +0.3 1.5 sulfite exporter TauE/SafE family protein compare
ABIE41_RS22620 +0.3 0.6 alpha/beta hydrolase compare
ABIE41_RS13390 +0.3 1.9 hypothetical protein compare
ABIE41_RS15065 +0.3 0.5 DUF1127 domain-containing protein compare
ABIE41_RS24065 +0.3 1.5 quinone-dependent dihydroorotate dehydrogenase compare
ABIE41_RS02500 +0.3 1.0 carboxylating nicotinate-nucleotide diphosphorylase compare
ABIE41_RS04120 +0.3 1.4 Crp/Fnr family transcriptional regulator compare
ABIE41_RS10380 +0.3 1.3 M20/M25/M40 family metallo-hydrolase compare
ABIE41_RS13525 +0.3 2.0 NnrU family protein compare
ABIE41_RS19455 +0.3 1.3 hypothetical protein compare
ABIE41_RS10660 +0.3 1.7 zinc-dependent alcohol dehydrogenase family protein compare
ABIE41_RS19905 +0.3 1.3 pyridoxine 5'-phosphate synthase compare
ABIE41_RS22125 +0.3 1.0 ATP phosphoribosyltransferase regulatory subunit compare
ABIE41_RS23100 +0.3 1.8 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABIE41_RS19850 +0.3 1.2 DUF2336 domain-containing protein compare
ABIE41_RS01300 +0.3 2.0 DUF6551 family protein compare


Specific Phenotypes

None in this experiment

For Bosea sp. OAE506 in carbon source experiments

For carbon source Ying_all64 across organisms