Experiment set4S324 for Escherichia coli ECRC101

Compare to:

TP9

200 most detrimental genes:

  gene name fitness t score description  
MCAODC_17700 mdtI +2.1 3.1 multidrug/spermidine efflux SMR transporter subunit MdtI compare
MCAODC_04780 tatC +2.1 3.3 Sec-independent protein translocase subunit TatC compare
MCAODC_13420 +1.9 3.4 hypothetical protein compare
MCAODC_13545 +1.7 2.7 bacteriocin compare
MCAODC_20460 wzzB +1.7 9.8 LPS O-antigen chain length determinant protein WzzB compare
MCAODC_23280 yeeS +1.7 2.3 UPF0758 protein YeeS compare
MCAODC_16475 pptA +1.7 3.6 tautomerase PptA compare
MCAODC_09425 ftsP +1.6 3.0 cell division protein FtsP compare
MCAODC_22790 potC +1.5 2.3 spermidine/putrescine ABC transporter permease PotC compare
MCAODC_19490 gpA1 +1.5 2.2 Phage terminase, large subunit GpA compare
MCAODC_20530 wcaA +1.5 3.9 glycosyl transferase compare
MCAODC_20540 +1.4 10.8 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_00150 cII +1.4 2.1 Transcriptional activator II compare
MCAODC_20485 manC2 +1.4 2.8 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_05085 wecA +1.3 10.6 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_16570 yddM +1.3 1.5 HigA family addiction module antitoxin compare
MCAODC_20525 wzy +1.3 3.7 O157 family O-antigen polymerase compare
MCAODC_23420 tnp-IS1 +1.3 1.6 IS1 family transposase compare
MCAODC_06185 rfaJ +1.3 8.4 glucosyltransferase compare
MCAODC_02465 +1.3 2.1 Ribose import ATP-binding protein RbsA compare
MCAODC_15940 ycjV +1.3 1.5 Uncharacterized ABC transporter ATP-binding protein YcjV compare
MCAODC_22665 +1.2 2.5 DUF1378 domain-containing protein compare
MCAODC_25180 ybjN +1.2 2.1 Uncharacterized protein YbjN compare
MCAODC_18970 yebV +1.2 2.2 Uncharacterized protein YebV compare
MCAODC_06525 yiaG +1.2 2.1 HTH-type transcriptional regulator compare
MCAODC_12480 ypfN +1.2 1.7 UPF0370 protein YpfN compare
MCAODC_13125 +1.2 3.9 hypothetical protein compare
MCAODC_11020 rpoS +1.2 9.0 RNA polymerase sigma factor RpoS compare
MCAODC_23300 +1.2 1.5 chemotaxis protein compare
MCAODC_15400 ccdB +1.2 1.1 type II toxin-antitoxin system toxin CcdB compare
MCAODC_18130 ldtE +1.2 2.9 L,D-transpeptidase LdtE compare
MCAODC_19375 yecA +1.1 1.2 UPF0149 family protein YecA compare
MCAODC_23390 +1.1 1.2 DUF4222 domain-containing protein compare
MCAODC_18125 lpp +1.1 1.0 murein lipoprotein Lpp compare
MCAODC_16415 mcbR +1.1 1.8 colanic acid/biofilm transcriptional regulator McbR compare
MCAODC_18565 ynjH +1.1 1.0 Uncharacterized protein YnjH compare
MCAODC_22495 +1.1 1.1 CP4-44 prophage putative disrupted hemin or colicin receptor compare
MCAODC_09625 +1.1 2.2 adherence protein compare
MCAODC_00125 +1.1 1.7 tail fiber assembly protein compare
MCAODC_05950 escF +1.1 0.7 type III secretion system LEE needle filament protein EscF compare
MCAODC_17770 manA +1.1 1.1 mannose-6-phosphate isomerase compare
MCAODC_24515 +1.1 2.6 hypothetical protein compare
MCAODC_24500 ydfA +1.1 2.3 Uncharacterized protein YdfA compare
MCAODC_13265 +1.1 5.7 hypothetical protein compare
MCAODC_07150 acpP +1.0 1.4 acyl carrier protein compare
MCAODC_23440 +1.0 1.5 hypothetical protein compare
MCAODC_22765 +1.0 1.1 DUF1391 domain-containing protein compare
MCAODC_17510 dnaC +1.0 1.4 DNA replication protein DnaC compare
MCAODC_18095 +1.0 1.7 Putative oxidoreductase Fe-S subunit compare
MCAODC_06190 rfaB +1.0 3.9 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_12570 eutN +1.0 2.6 ethanolamine utilization microcompartment protein EutN compare
MCAODC_00050 ybcO +1.0 1.7 Putative nuclease YbcO compare
MCAODC_18110 ydhY +1.0 2.0 ferredoxin-like protein compare
MCAODC_17615 ynfB +1.0 1.3 DUF1283 domain-containing protein compare
MCAODC_14870 +1.0 0.9 replication protein P compare
MCAODC_12945 +1.0 1.9 CoA-transferase compare
MCAODC_17185 +1.0 0.6 Rha family transcriptional regulator compare
MCAODC_25840 +0.9 1.8 DUF1382 domain-containing protein compare
MCAODC_25500 espX2 +0.9 1.8 type III secretion system effector EspX2 compare
MCAODC_10015 zapA +0.9 4.0 cell division protein ZapA compare
MCAODC_13115 +0.9 3.0 hypothetical protein compare
MCAODC_09620 +0.9 1.2 adherence protein compare
MCAODC_25835 +0.9 0.7 DUF1382 domain-containing protein compare
MCAODC_17855 rsxA +0.9 1.5 electron transport complex subunit RsxA compare
MCAODC_17060 +0.9 1.4 DUF1327 domain-containing protein compare
MCAODC_14895 ybcM +0.9 1.6 Uncharacterized HTH-type transcriptional regulator YbcM compare
MCAODC_16945 nleG6-2 +0.9 0.9 DUF1076 domain-containing protein compare
MCAODC_13205 +0.9 3.3 serine/threonine protein kinase compare
MCAODC_11400 ygaP +0.9 1.3 thiosulfate sulfurtransferase YgaP compare
MCAODC_20000 +0.9 1.2 SAR-endolysin compare
MCAODC_13185 ea10 +0.9 2.7 Protein ea10 compare
MCAODC_18590 ydjA +0.9 1.4 NAD(P)H nitroreductase compare
MCAODC_15705 lapA +0.9 2.2 lipopolysaccharide assembly protein LapA compare
MCAODC_16725 fimA +0.9 1.6 type 1 fimbrial major subunit FimA compare
MCAODC_23470 +0.9 2.5 General stress protein 16U compare
MCAODC_23710 +0.9 1.8 hypothetical protein compare
MCAODC_15880 pspE +0.9 2.0 thiosulfate sulfurtransferase PspE compare
MCAODC_19980 +0.8 0.7 PerC family transcriptional regulator compare
MCAODC_21775 ldrB +0.8 1.3 Small toxic polypeptide LdrB compare
MCAODC_17170 +0.8 1.2 DUF1627 domain-containing protein compare
MCAODC_06195 rfaL +0.8 4.2 O-antigen ligase RfaL compare
MCAODC_12315 +0.8 1.8 hypothetical protein compare
MCAODC_13150 +0.8 1.7 DUF1382 domain-containing protein compare
MCAODC_26260 +0.8 0.9 Uncharacterized protein YbfC compare
MCAODC_18410 ydjO +0.8 2.3 Uncharacterized protein YdjO compare
MCAODC_17845 ydgT +0.8 2.5 transcription modulator YdgT compare
MCAODC_13535 +0.8 3.9 hypothetical protein compare
MCAODC_16180 ynbA +0.8 2.2 Inner membrane protein YnbA compare
MCAODC_20445 hisA +0.8 1.9 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)me thylideneamino]imidazole-4-carboxamide isomerase compare
MCAODC_25130 artJ +0.8 2.7 ABC transporter substrate-binding protein ArtJ compare
MCAODC_18415 cedA +0.8 2.3 cell division activator CedA compare
MCAODC_11800 16S_rrna +0.8 0.9 16S ribosomal RNA compare
MCAODC_21590 yciI +0.8 0.6 YciI family protein compare
MCAODC_00045 rusA +0.8 0.8 crossover junction endodeoxyribonuclease RusA compare
MCAODC_23895 cadC1 +0.8 0.8 transcriptional regulator compare
MCAODC_13080 +0.8 1.8 adenine methylase compare
MCAODC_16185 ynbB +0.8 0.9 Uncharacterized protein YnbB compare
MCAODC_19295 motA +0.8 1.9 flagellar motor stator protein MotA compare
MCAODC_13350 Arg_trna +0.8 0.9 tRNA-Arg(tct) compare
MCAODC_18725 yeaL +0.8 0.8 UPF0756 membrane protein CKO_01811 compare
MCAODC_13475 +0.8 3.1 hypothetical protein compare
MCAODC_13430 +0.8 5.5 terminase compare
MCAODC_27470 atl +0.8 3.1 DNA base-flipping protein compare
MCAODC_13105 +0.8 4.7 DUF4752 domain-containing protein compare
MCAODC_07030 sgaB +0.8 2.6 PTS sugar transporter subunit IIB compare
MCAODC_09635 nleE +0.7 0.8 type III secretion system effector cysteine methyltransferase NleE compare
MCAODC_27135 hyi +0.7 1.4 hydroxypyruvate isomerase compare
MCAODC_13485 +0.7 3.5 phage tail protein compare
MCAODC_11085 hypB +0.7 2.1 hydrogenase nickel incorporation protein HypB compare
MCAODC_12765 +0.7 3.1 flxA-like family protein compare
MCAODC_24020 rutE +0.7 2.4 malonic semialdehyde reductase compare
MCAODC_13375 +0.7 4.2 sialate O-acetylesterase compare
MCAODC_16550 yddG +0.7 1.0 aromatic amino acid efflux DMT transporter YddG compare
MCAODC_27310 ybaQ +0.7 1.7 HigA family addiction module antitoxin compare
MCAODC_20380 yeeD +0.7 1.6 Putative sulfur carrier protein YeeD compare
MCAODC_15360 +0.7 1.2 hypothetical protein compare
MCAODC_01040 ampD +0.7 3.6 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MCAODC_13190 +0.7 1.0 Prophage protein compare
MCAODC_10430 yqeH +0.7 1.7 Uncharacterized protein YqeH compare
MCAODC_03685 yjbD +0.7 2.3 Uncharacterized protein YjbD compare
MCAODC_17160 +0.7 1.7 hypothetical protein compare
MCAODC_22155 gpA1 +0.7 2.0 terminase compare
MCAODC_16655 gadB +0.7 1.1 glutamate decarboxylase compare
MCAODC_13075 +0.7 1.0 DUF1382 domain-containing protein compare
MCAODC_14885 ybcK +0.7 0.9 Uncharacterized protein YbcK compare
MCAODC_20475 perB +0.7 2.0 GDP-perosamine N-acetyltransferase compare
MCAODC_21190 zorO +0.7 0.7 Small toxic protein ZorO compare
MCAODC_13470 +0.7 3.7 hypothetical protein compare
MCAODC_05410 +0.7 2.2 hypothetical protein compare
MCAODC_27245 +0.7 1.0 hypothetical protein compare
MCAODC_25910 modC +0.7 3.4 molybdenum ABC transporter ATP-binding protein ModC compare
MCAODC_06205 rfaF +0.7 0.7 ADP-heptose--LPS heptosyltransferase RfaF compare
MCAODC_10840 ygcW +0.7 1.8 Uncharacterized oxidoreductase YgcW compare
MCAODC_10380 +0.7 1.6 Transglycosylase SLT domain-containing protein compare
MCAODC_23240 ghrA +0.7 2.9 glyoxylate/hydroxypyruvate reductase GhrA compare
MCAODC_18980 pphA +0.7 1.3 protein-serine/threonine phosphatase compare
MCAODC_16380 ydcV +0.7 1.9 Inner membrane ABC transporter permease protein YdcV compare
MCAODC_13555 +0.7 6.0 Uncharacterized protein H0150 compare
MCAODC_01630 thrL +0.7 1.7 thr operon leader peptide compare
MCAODC_13285 +0.7 2.4 Putitave protein compare
MCAODC_13385 +0.7 1.1 DUF826 domain-containing protein compare
MCAODC_13550 +0.7 5.0 hypothetical protein compare
MCAODC_15170 putA1 +0.7 1.2 CopG family transcriptional regulator compare
MCAODC_18775 leuE +0.7 2.0 leucine efflux protein LeuE compare
MCAODC_17270 nleG7 +0.7 1.2 Type III secretion system effector NleG7, E3 Ubiquitin Ligase compare
MCAODC_18965 rsmF +0.7 0.6 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
MCAODC_13065 +0.7 1.3 50S ribosomal protein L7/L12 compare
MCAODC_13255 +0.7 1.6 hypothetical protein compare
MCAODC_20155 +0.7 0.8 DUF1482 domain-containing protein compare
MCAODC_13480 +0.7 4.0 DUF6682 domain-containing protein compare
MCAODC_21540 +0.7 1.1 hypothetical protein compare
MCAODC_13130 +0.7 3.4 hypothetical protein compare
MCAODC_23400 +0.7 2.2 DNA-binding protein compare
MCAODC_10320 sctT +0.6 1.4 type III secretion system export apparatus subunit SctT compare
MCAODC_05780 escE +0.6 1.0 chaperone for EscF compare
MCAODC_20655 +0.6 1.2 transcriptional regulator compare
MCAODC_13495 +0.6 2.2 hypothetical protein compare
MCAODC_22095 +0.6 2.0 phage tail assembly protein T compare
MCAODC_22070 +0.6 1.5 tail assembly protein compare
MCAODC_13270 +0.6 3.5 NinB protein compare
MCAODC_15730 yciT +0.6 0.7 DNA-binding transcriptional regulator YciT compare
MCAODC_17515 +0.6 2.4 DNA-binding protein compare
MCAODC_13540 +0.6 3.4 hypothetical protein compare
MCAODC_13250 +0.6 3.0 NinA compare
MCAODC_13500 +0.6 4.2 hypothetical protein compare
MCAODC_21255 +0.6 1.1 IS4 family transposase compare
MCAODC_10315 +0.6 1.3 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
MCAODC_11080 hypC +0.6 2.0 hydrogenase 3 maturation protein HypC compare
MCAODC_05945 cesD2 +0.6 0.6 LcrR family type III secretion system chaperone CesD2 compare
MCAODC_11910 rseA +0.6 1.7 anti-sigma-E factor RseA compare
MCAODC_03505 +0.6 1.0 CPS-53 (KpLE1) prophage protein compare
MCAODC_23015 flgF +0.6 1.5 flagellar basal-body rod protein FlgF compare
MCAODC_27385 ybaB +0.6 0.6 YbaB/EbfC family nucleoid-associated protein compare
MCAODC_06005 tnp-IS3 +0.6 1.2 IS3 family transposase compare
MCAODC_08140 yhdZ +0.6 2.4 Uncharacterized amino-acid ABC transporter ATP-binding protein YhdZ compare
MCAODC_18910 cspE +0.6 2.1 transcription antiterminator/RNA stability regulator CspE compare
MCAODC_21670 galU +0.6 0.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MCAODC_18220 ydiF +0.6 1.0 Acetate CoA-transferase YdiF compare
MCAODC_19455 +0.6 0.7 derepression protein compare
MCAODC_04680 yihD +0.6 1.5 Protein YihD compare
MCAODC_17920 mliC +0.6 0.5 C-type lysozyme inhibitor compare
MCAODC_04530 yihT +0.6 2.1 sulfofructosephosphate aldolase compare
MCAODC_18050 mdtK +0.6 2.1 multidrug efflux MATE transporter MdtK compare
MCAODC_05800 escR +0.6 1.4 Type III secretion systemminor export apparatus protein EscR compare
MCAODC_26480 gltK +0.6 2.3 glutamate/aspartate ABC transporter permease GltK compare
MCAODC_28345 rclC +0.6 2.2 reactive chlorine species resistance protein RclC compare
MCAODC_18800 yeaX +0.6 1.8 carnitine monooxygenase subunit YeaX compare
MCAODC_20625 wcaA +0.6 2.2 colanic acid biosynthesis glycosyltransferase WcaA compare
MCAODC_25555 ybhM +0.6 2.0 Uncharacterized protein YbhM compare
MCAODC_23825 acpS2 +0.6 0.5 putative holo-[acyl-carrier-protein] synthase 2 compare
MCAODC_22105 +0.6 1.4 Tail tube protein compare
MCAODC_19675 fliE +0.6 1.2 flagellar hook-basal body complex protein FliE compare
MCAODC_17235 +0.6 0.8 site-specific integrase compare
MCAODC_17745 rstA +0.6 1.5 two-component system response regulator RstA compare
MCAODC_19020 exoX +0.6 2.4 exodeoxyribonuclease X compare
MCAODC_02245 spoIVCA +0.6 1.5 resolvase compare
MCAODC_21145 +0.6 2.2 DUF2574 domain-containing protein compare
MCAODC_19500 cysE +0.6 0.8 serine acetyltransferase compare
MCAODC_06215 yibB +0.6 2.0 protein YibB compare
MCAODC_16880 mgtS +0.6 0.7 protein MgtS compare


Specific Phenotypes

None in this experiment

For Escherichia coli ECRC101 in phage experiments

For phage Phage across organisms