Experiment set4S295 for Escherichia coli ECRC101

Compare to:

EV240

200 most important genes:

  gene name fitness t score description  
MCAODC_06195 rfaL -6.8 -8.0 O-antigen ligase RfaL compare
MCAODC_06185 rfaJ -6.7 -8.0 glucosyltransferase compare
MCAODC_20530 wcaA -6.7 -4.2 glycosyl transferase compare
MCAODC_06175 waaO -6.7 -6.5 lipopolysaccharide 3-alpha-galactosyltransferase compare
MCAODC_20525 wzy -6.2 -6.0 O157 family O-antigen polymerase compare
MCAODC_20475 perB -5.9 -4.1 GDP-perosamine N-acetyltransferase compare
MCAODC_20535 galF -5.7 -6.8 UTP--glucose-1-phosphate uridylyltransferase GalF compare
MCAODC_05085 wecA -5.7 -20.0 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
MCAODC_20485 manC2 -5.6 -3.5 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
MCAODC_08200 fis -5.6 -3.4 DNA-binding transcriptional regulator Fis compare
MCAODC_20540 -5.4 -17.0 N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase compare
MCAODC_26315 pgm -5.1 -17.4 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) compare
MCAODC_05065 rffG -5.1 -18.2 dTDP-glucose 4,6-dehydratase compare
MCAODC_25935 galE -5.0 -9.7 UDP-glucose 4-epimerase GalE compare
MCAODC_11310 emrR -4.9 -5.9 multidrug efflux transporter EmrAB transcriptional repressor EmrR compare
MCAODC_14020 arnD -4.8 -9.2 4-deoxy-4-formamido-L-arabinose-phosphoundecapren ol deformylase compare
MCAODC_24855 ihfB -4.7 -3.0 integration host factor subunit beta compare
MCAODC_06170 rfaP -4.7 -4.6 lipopolysaccharide core heptose(I) kinase RfaP compare
MCAODC_17770 manA -4.6 -2.3 mannose-6-phosphate isomerase compare
MCAODC_09775 yggS -4.6 -8.5 pyridoxal phosphate homeostasis protein compare
MCAODC_26380 nagA -4.6 -10.2 N-acetylglucosamine-6-phosphate deacetylase compare
MCAODC_02775 miaA -4.5 -5.8 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
MCAODC_13715 -4.4 -9.8 Protein DedA compare
MCAODC_04770 rfaH -4.4 -5.4 transcription/translation regulatory transformer protein RfaH compare
MCAODC_05060 rfbA -4.0 -12.3 glucose-1-phosphate thymidylyltransferase RfbA compare
MCAODC_24120 -3.8 -1.9 Threonine-rich inner membrane protein GfcA compare
MCAODC_06190 rfaB -3.8 -6.1 UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase compare
MCAODC_06165 rfaG -3.8 -5.8 Lipopolysaccharide core biosynthesis protein RfaG compare
MCAODC_09320 tolC -3.7 -12.2 outer membrane channel protein TolC compare
MCAODC_22925 fabF -3.7 -1.9 beta-ketoacyl-ACP synthase II compare
MCAODC_03675 pgi -3.7 -8.3 glucose-6-phosphate isomerase compare
MCAODC_20480 cpsG -3.7 -2.5 colanic acid biosynthesis phosphomannomutase CpsG compare
MCAODC_09160 Ile2_trna -3.6 -2.9 tRNA-Ile2(cat) compare
MCAODC_08565 greA -3.6 -6.3 transcription elongation factor GreA compare
MCAODC_13650 prmB -3.5 -12.7 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
MCAODC_18125 lpp -3.5 -1.3 murein lipoprotein Lpp compare
MCAODC_22295 emrE -3.5 -1.7 multidrug efflux SMR transporter EmrE compare
MCAODC_08625 nusA -3.4 -2.3 Transcription termination/antitermination protein NusA compare
MCAODC_13720 accD -3.4 -1.8 acetyl-CoA carboxylase, carboxyltransferase subunit beta compare
MCAODC_08350 sspA -3.4 -8.3 stringent starvation protein A compare
MCAODC_21670 galU -3.4 -2.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MCAODC_21650 ychT -3.3 -2.3 Protein YchT compare
MCAODC_20470 gndA -3.2 -10.2 NADP-dependent phosphogluconate dehydrogenase compare
MCAODC_21955 minC -3.1 -2.5 septum site-determining protein MinC compare
MCAODC_20490 wbdQ -3.1 -1.4 GDP-mannose mannosyl hydrolase WbdQ/WbhG compare
MCAODC_21335 -3.1 -1.6 phage tail protein compare
MCAODC_27545 -3.0 -5.1 Lon protease compare
MCAODC_09425 ftsP -3.0 -3.3 cell division protein FtsP compare
MCAODC_11320 ygaZ -2.9 -8.5 L-valine exporter subunit YgaZ compare
MCAODC_01200 cra -2.9 -7.8 catabolite repressor/activator compare
MCAODC_07455 glpD -2.8 -6.0 glycerol-3-phosphate dehydrogenase compare
MCAODC_21600 clsA -2.8 -3.8 cardiolipin synthase ClsA compare
MCAODC_06320 mtlD -2.8 -4.8 mannitol-1-phosphate 5-dehydrogenase compare
MCAODC_25895 pgl -2.8 -8.7 6-phosphogluconolactonase compare
MCAODC_17125 -2.7 -2.9 hypothetical protein compare
MCAODC_24125 gfcB -2.7 -4.6 Uncharacterized lipoprotein GfcB compare
MCAODC_02465 -2.7 -1.8 Ribose import ATP-binding protein RbsA compare
MCAODC_26030 tolA -2.6 -3.1 cell envelope integrity protein TolA compare
MCAODC_13895 nuoE -2.6 -2.2 NADH-quinone oxidoreductase subunit NuoE compare
MCAODC_18255 ydiT -2.6 -2.1 Ferredoxin-like protein YdiT compare
MCAODC_00185 Thr_trna -2.6 -1.3 tRNA-Thr(cgt) compare
MCAODC_08205 dusB -2.5 -10.4 tRNA dihydrouridine synthase DusB compare
MCAODC_14005 arnF -2.5 -6.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MCAODC_02745 purA -2.5 -2.0 adenylosuccinate synthase compare
MCAODC_00995 acnB -2.4 -2.8 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase compare
MCAODC_18840 yoaC -2.4 -3.8 Uncharacterized protein YoaC compare
MCAODC_04590 typA -2.4 -10.8 ribosome-dependent GTPase TypA compare
MCAODC_13685 fabB -2.3 -2.5 beta-ketoacyl-ACP synthase I compare
MCAODC_24130 gfcC -2.3 -5.5 Uncharacterized protein GfcC compare
MCAODC_26990 Arg_trna -2.3 -3.7 tRNA-Arg(tct) compare
MCAODC_22830 mfd -2.3 -6.9 transcription-repair coupling factor compare
MCAODC_12295 guaA -2.3 -3.4 glutamine-hydrolyzing GMP synthase compare
MCAODC_27835 proC -2.3 -5.0 pyrroline-5-carboxylate reductase compare
MCAODC_27555 clpX -2.2 -3.0 ATP-dependent protease ATP-binding subunit ClpX compare
MCAODC_24135 gfcD -2.2 -11.8 Uncharacterized lipoprotein GfcD compare
MCAODC_05285 mioC -2.1 -7.5 FMN-binding protein MioC compare
MCAODC_21675 rssB -2.1 -3.9 two-component system response regulator RssB compare
MCAODC_17860 rsxB -2.0 -3.3 electron transport complex subunit RsxB compare
MCAODC_24150 etk -2.0 -7.5 tyrosine-protein kinase compare
MCAODC_17920 mliC -2.0 -1.9 C-type lysozyme inhibitor compare
MCAODC_10780 mazE -2.0 -1.7 type II toxin-antitoxin system antitoxin MazE compare
MCAODC_18485 astE -2.0 -3.8 succinylglutamate desuccinylase compare
MCAODC_23300 -1.9 -1.2 chemotaxis protein compare
MCAODC_21590 yciI -1.9 -2.2 YciI family protein compare
MCAODC_14170 nrdA -1.9 -1.4 ribonucleoside-diphosphate reductase subunit alpha compare
MCAODC_24505 ydfB -1.9 -1.3 Uncharacterized protein YdfB compare
MCAODC_05400 pstB -1.8 -2.0 phosphate ABC transporter ATP-binding protein PstB compare
MCAODC_14490 fruB -1.8 -2.9 fused PTS fructose transporter subunit IIA/HPr protein compare
MCAODC_18970 yebV -1.8 -1.2 Uncharacterized protein YebV compare
MCAODC_15720 yciH -1.8 -1.1 stress response translation initiation inhibitor YciH compare
MCAODC_24140 gfcE -1.8 -6.3 Putative polysaccharide export protein GfcE compare
MCAODC_07640 aroK -1.8 -4.7 shikimate kinase AroK compare
MCAODC_17865 rsxC -1.8 -7.4 electron transport complex subunit RsxC compare
MCAODC_05055 rffC -1.8 -4.0 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase compare
MCAODC_15430 sopA -1.7 -3.6 plasmid-partitioning protein SopA compare
MCAODC_09290 ubiK -1.7 -1.4 ubiquinone biosynthesis accessory factor UbiK compare
MCAODC_22415 -1.7 -4.3 DNA primase compare
MCAODC_06215 yibB -1.7 -3.8 protein YibB compare
MCAODC_10335 csgD -1.7 -1.7 LuxR family transcriptional regulator compare
MCAODC_00050 ybcO -1.7 -1.5 Putative nuclease YbcO compare
MCAODC_17870 rsxD -1.6 -4.9 electron transport complex subunit RsxD compare
MCAODC_26385 nagC -1.6 -3.7 DNA-binding transcriptional regulator NagC compare
MCAODC_17855 rsxA -1.6 -1.6 electron transport complex subunit RsxA compare
MCAODC_16030 fnr -1.6 -4.3 fumarate/nitrate reduction transcriptional regulator Fnr compare
MCAODC_10375 ygeK -1.6 -2.1 Uncharacterized response regulatory protein YgeK compare
MCAODC_25285 yiaG -1.5 -3.8 transcriptional regulator compare
MCAODC_05995 -1.5 -0.9 toxin compare
MCAODC_19060 kdgA -1.5 -1.0 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
MCAODC_25405 -1.5 -5.4 Outer membrane protein X conserved
MCAODC_26040 tolQ -1.5 -1.7 Tol-Pal system protein TolQ compare
MCAODC_05955 escG -1.5 -1.2 type III secretion system LEE needle protein cochaperone EscG compare
MCAODC_26025 tolB -1.4 -4.2 Tol-Pal system protein TolB compare
MCAODC_19670 espR4 -1.4 -1.7 T3SS effector leucine-rich repeat protein EspR4 compare
MCAODC_21255 -1.4 -1.6 IS4 family transposase compare
MCAODC_21140 fimA -1.4 -1.0 Uncharacterized fimbrial-like protein YehD compare
MCAODC_17880 rsxE -1.4 -2.0 electron transport complex subunit RsxE compare
MCAODC_05845 sepD -1.4 -1.7 type III secretion system LEE switch protein SepD compare
MCAODC_13880 nuoA -1.4 -2.6 NADH-quinone oxidoreductase subunit NuoA compare
MCAODC_20085 -1.4 -1.1 hypothetical protein compare
MCAODC_12720 ptsI -1.4 -1.7 phosphoenolpyruvate-protein phosphotransferase PtsI compare
MCAODC_22520 rri1 -1.4 -1.8 phage tail protein compare
MCAODC_01340 surA -1.4 -2.8 peptidylprolyl isomerase SurA compare
MCAODC_04780 tatC -1.4 -2.0 Sec-independent protein translocase subunit TatC compare
MCAODC_23985 -1.3 -1.5 hypothetical protein compare
MCAODC_28565 -1.3 -1.3 hypothetical protein compare
MCAODC_26810 fepG -1.3 -4.0 iron-enterobactin ABC transporter permease compare
MCAODC_19430 -1.3 -1.8 hypothetical protein compare
MCAODC_02450 fbp -1.3 -6.7 class 1 fructose-bisphosphatase compare
MCAODC_25835 -1.3 -1.7 DUF1382 domain-containing protein compare
MCAODC_12495 ypfM -1.3 -1.8 protein YpfM compare
MCAODC_17995 grxD -1.3 -2.2 monothiol glutaredoxin 4 compare
MCAODC_15150 repA2 -1.3 -5.9 Replication regulatory protein repA2 compare
MCAODC_19225 yecT -1.3 -1.9 Uncharacterized protein YecT compare
MCAODC_22420 -1.3 -1.6 DUF4222 domain-containing protein compare
MCAODC_28510 -1.3 -2.9 hypothetical protein compare
MCAODC_18525 ydjZ -1.3 -3.0 TVP38/TMEM64 family inner membrane protein YdjZ compare
MCAODC_20375 sbcB -1.3 -2.9 exodeoxyribonuclease I compare
MCAODC_00045 rusA -1.3 -0.7 crossover junction endodeoxyribonuclease RusA compare
MCAODC_22475 -1.2 -1.6 hypothetical protein compare
MCAODC_24145 etp -1.2 -3.5 protein-tyrosine-phosphatase Etp compare
MCAODC_05050 rffA -1.2 -5.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MCAODC_19425 -1.2 -2.1 Phage protein compare
MCAODC_24055 -1.2 -1.5 YccE compare
MCAODC_15865 pspB -1.2 -1.0 envelope stress response membrane protein PspB compare
MCAODC_18115 fumD -1.2 -1.9 fumarate hydratase FumD compare
MCAODC_23785 lolD -1.2 -1.4 lipoprotein-releasing system ATP-binding protein LolD compare
MCAODC_16545 ompC2 -1.2 -2.0 Outer membrane porin C 2 compare
MCAODC_21775 ldrB -1.2 -1.2 Small toxic polypeptide LdrB compare
MCAODC_04060 sthA -1.2 -5.7 Si-specific NAD(P)(+) transhydrogenase compare
MCAODC_10415 yqeJ -1.2 -2.0 Uncharacterized protein YqeJ compare
MCAODC_12795 tnpA -1.2 -3.2 IS200/IS605 family transposase compare
MCAODC_23435 -1.2 -1.0 Oligogalacturonate-specific porin protein KdgM compare
MCAODC_11930 lepA -1.2 -1.5 translation elongation factor 4 compare
MCAODC_05785 cesAB -1.2 -1.3 chaperone for EspA and EspB compare
MCAODC_24750 ssuB -1.1 -2.9 aliphatic sulfonates ABC transporter ATP-binding protein compare
MCAODC_14010 arnE -1.1 -3.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MCAODC_17175 -1.1 -2.2 replication protein compare
MCAODC_15435 sopA -1.1 -1.3 plasmid-partitioning protein SopA compare
MCAODC_09085 higA -1.1 -1.2 type II toxin-antitoxin system antitoxin HigA compare
MCAODC_23290 -1.1 -1.7 DUF945 domain-containing protein compare
MCAODC_01545 nhaA -1.1 -4.9 Na+/H+ antiporter NhaA compare
MCAODC_13565 mlaA -1.1 -5.7 phospholipid-binding lipoprotein MlaA compare
MCAODC_07150 acpP -1.1 -0.9 acyl carrier protein compare
MCAODC_26440 miaB -1.1 -5.7 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB compare
MCAODC_24070 cbpM -1.1 -1.9 chaperone modulator CbpM compare
MCAODC_24450 ybbA -1.1 -1.2 iroE compare
MCAODC_23345 -1.1 -0.7 hypothetical protein compare
MCAODC_00105 -1.1 -5.4 GIY-YIG domain-containing protein conserved
MCAODC_20395 yoeI -1.1 -1.3 Uncharacterized protein YoeI compare
MCAODC_22975 rluC -1.1 -3.2 23S rRNA pseudouridine(955/2504/2580) synthase RluC compare
MCAODC_25085 ybjQ -1.1 -1.3 UPF0145 protein YbjQ compare
MCAODC_23535 terW -1.1 -1.3 tellurium resistance protein TerW compare
MCAODC_23745 -1.0 -1.1 Membrane protein compare
MCAODC_14810 bet -1.0 -1.6 phage recombination protein Bet compare
MCAODC_08495 mlaF -1.0 -6.7 phospholipid ABC transporter ATP-binding protein MlaF compare
MCAODC_14015 arnT -1.0 -6.2 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase compare
MCAODC_14255 apbE -1.0 -4.0 FAD:protein FMN transferase ApbE compare
MCAODC_04940 yifL -1.0 -2.8 Uncharacterized lipoprotein YifL compare
MCAODC_02170 uvrD -1.0 -7.1 DNA helicase compare
MCAODC_23180 -1.0 -1.6 Uncharacterized protein YmdA compare
MCAODC_08900 yhaB -1.0 -0.8 Uncharacterized protein YhaB compare
MCAODC_26020 pal -1.0 -1.8 peptidoglycan-associated lipoprotein Pal compare
MCAODC_13710 truA -1.0 -2.3 aspartate-semialdehyde dehydrogenase compare
MCAODC_16680 ydeN -1.0 -2.4 Uncharacterized sulfatase YdeN compare
MCAODC_11660 rnfH -1.0 -2.1 RnfH family protein compare
MCAODC_09825 speA -1.0 -4.7 biosynthetic arginine decarboxylase compare
MCAODC_13915 nuoI -1.0 -1.9 NADH-quinone oxidoreductase subunit NuoI compare
MCAODC_21155 metG -1.0 -0.9 methionine--tRNA ligase compare
MCAODC_13925 nuoK -1.0 -1.5 NADH-quinone oxidoreductase subunit NuoK compare
MCAODC_16585 sra -0.9 -2.2 stationary-phase-induced ribosome-associated protein compare
MCAODC_19700 fliJ -0.9 -1.6 flagella biosynthesis chaperone FliJ compare
MCAODC_27560 clpP -0.9 -1.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
MCAODC_03425 -0.9 -1.8 hypothetical protein compare
MCAODC_27730 tgt -0.9 -3.2 tRNA guanosine(34) transglycosylase Tgt compare
MCAODC_12245 rodZ -0.9 -3.7 cytoskeleton protein RodZ compare
MCAODC_26835 fes -0.9 -4.3 enterobactin/ferric enterobactin esterase compare
MCAODC_01530 fimD -0.9 -1.5 fimbrial assembly protein compare
MCAODC_19345 yecJ -0.9 -0.9 Uncharacterized protein YecJ compare
MCAODC_17935 slyA -0.9 -2.4 transcriptional regulator SlyA compare
MCAODC_04945 cyaY -0.9 -2.4 iron donor protein CyaY compare


Specific Phenotypes

For 1 genes in this experiment

For phage Phage in Escherichia coli ECRC101

For phage Phage across organisms