Experiment set4S289 for Escherichia coli ECRC101
WM_EV240
Group: phageMedia: Whole_milk_plus_SM_buffer + Phage (10 MOI)
Culturing: Ecoli_ECRC101_ML1, 48 well microplate, Aerobic, at 25 (C), shaken=double orbital, continuous, 205cpm
By: Lucas on 6/9/2025
Specific Phenotypes
For 4 genes in this experiment
For phage Phage in Escherichia coli ECRC101
For phage Phage across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| DNA-replication | 1 |
| Deoxyribose and Deoxynucleoside Catabolism | 1 |
| Peptidoglycan Biosynthesis | 1 |
| Type IV pilus | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| peptidoglycan maturation (meso-diaminopimelate containing) | 12 | 6 | 3 |
| peptidoglycan biosynthesis II (staphylococci) | 17 | 12 | 2 |
| peptidoglycan biosynthesis IV (Enterococcus faecium) | 17 | 12 | 2 |
| peptidoglycan biosynthesis V (β-lactam resistance) | 17 | 11 | 2 |
| peptidoglycan biosynthesis I (meso-diaminopimelate containing) | 12 | 12 | 1 |
| peptidoglycan biosynthesis III (mycobacteria) | 15 | 11 | 1 |