| | gene | name | fitness | t score | description | |
|---|
| PFR28_02986 | | +1.8 | 13.8 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | compare |
| PFR28_04979 | | +1.8 | 14.0 | Glucans biosynthesis glucosyltransferase H | compare |
| PFR28_01143 | | +1.8 | 9.4 | tRNA-dihydrouridine(20/20a) synthase | compare |
| PFR28_04978 | | +1.7 | 11.6 | Glucans biosynthesis protein G | compare |
| PFR28_02727 | | +1.6 | 4.0 | Cold shock protein CapB | compare |
| PFR28_01553 | | +1.5 | 6.8 | hypothetical protein | compare |
| PFR28_00780 | | +1.5 | 1.6 | hypothetical protein | compare |
| PFR28_03257 | | +1.5 | 9.1 | hypothetical protein | compare |
| PFR28_02987 | | +1.5 | 5.7 | putative 2-dehydro-3-deoxygalactonokinase DgoK1 | compare |
| PFR28_05058 | | +1.5 | 11.5 | hypothetical protein | compare |
| PFR28_04712 | | +1.4 | 2.2 | Dodecin | compare |
| PFR28_04633 | | +1.4 | 5.6 | Alginate biosynthesis sensor protein KinB | compare |
| PFR28_04366 | | +1.4 | 10.2 | Sensory transduction protein LytR | compare |
| PFR28_00847 | | +1.4 | 6.9 | Flagellar biosynthetic protein FliR | compare |
| PFR28_02507 | | +1.3 | 1.3 | Phosphoglycolate phosphatase | compare |
| PFR28_03427 | | +1.2 | 6.3 | Sensor histidine kinase RcsC | compare |
| PFR28_00832 | | +1.2 | 10.2 | Flagellar M-ring protein | compare |
| PFR28_00836 | | +1.2 | 7.3 | Flagellar FliJ protein | compare |
| PFR28_00807 | | +1.1 | 4.2 | Flagellar P-ring protein | compare |
| PFR28_00845 | | +1.1 | 6.6 | Flagellar biosynthetic protein FliP | compare |
| PFR28_00844 | | +1.1 | 2.0 | hypothetical protein | compare |
| PFR28_00846 | | +1.1 | 7.9 | Flagellar biosynthetic protein FliQ | compare |
| PFR28_00721 | | +1.1 | 2.2 | hypothetical protein | compare |
| PFR28_00835 | | +1.0 | 8.8 | Flagellum-specific ATP synthase | compare |
| PFR28_02703 | | +1.0 | 2.2 | hypothetical protein | compare |
| PFR28_00831 | | +1.0 | 7.0 | Flagellar hook-basal body complex protein FliE | compare |
| PFR28_00834 | | +1.0 | 8.8 | hypothetical protein | compare |
| PFR28_00356 | | +1.0 | 4.3 | Protein-glutamate methylesterase/protein-glutamine glutaminase | compare |
| PFR28_00849 | | +0.9 | 7.9 | Flagellar biosynthesis protein FlhA | compare |
| PFR28_01150 | | +0.9 | 2.9 | hypothetical protein | compare |
| PFR28_01071 | | +0.9 | 5.4 | hypothetical protein | compare |
| PFR28_00862 | | +0.9 | 4.6 | hypothetical protein | compare |
| PFR28_02407 | | +0.9 | 2.2 | Na(+)/H(+) antiporter subunit G | compare |
| PFR28_00848 | | +0.9 | 6.6 | Flagellar biosynthetic protein FlhB | compare |
| PFR28_00806 | | +0.9 | 6.4 | Flagellar L-ring protein | compare |
| PFR28_00064 | | +0.9 | 7.0 | Pyruvate dehydrogenase complex repressor | compare |
| PFR28_04115 | | +0.9 | 2.4 | Protein FecR | compare |
| PFR28_00833 | | +0.9 | 5.7 | Flagellar motor switch protein FliG | compare |
| PFR28_02841 | | +0.9 | 1.2 | hypothetical protein | compare |
| PFR28_01777 | | +0.9 | 1.7 | putative trans-3-hydroxy-L-proline dehydratase | compare |
| PFR28_01925 | | +0.9 | 3.0 | Vitamin B12 import ATP-binding protein BtuD | compare |
| PFR28_01572 | | +0.9 | 1.3 | hypothetical protein | compare |
| PFR28_01386 | | +0.9 | 1.6 | Glutamine transport ATP-binding protein GlnQ | compare |
| PFR28_03405 | | +0.8 | 4.3 | Cell division coordinator CpoB | compare |
| PFR28_00473 | | +0.8 | 1.2 | Regulatory protein RecX | compare |
| PFR28_04664 | | +0.8 | 4.1 | Trk system potassium uptake protein TrkA | compare |
| PFR28_03547 | | +0.8 | 5.7 | Transcriptional regulator DauR | compare |
| PFR28_01706 | | +0.8 | 1.3 | hypothetical protein | compare |
| PFR28_05111 | | +0.8 | 4.6 | Motility protein B | compare |
| PFR28_04709 | | +0.8 | 1.7 | Peroxiredoxin OsmC | compare |
| PFR28_00852 | | +0.8 | 6.6 | RNA polymerase sigma factor FliA | compare |
| PFR28_04297 | | +0.8 | 5.1 | Gamma-glutamylputrescine synthetase PuuA | compare |
| PFR28_02232 | | +0.8 | 1.5 | hypothetical protein | compare |
| PFR28_00593 | | +0.8 | 6.8 | HTH-type transcriptional regulator GntR | compare |
| PFR28_01273 | | +0.8 | 5.0 | hypothetical protein | compare |
| PFR28_03291 | | +0.8 | 2.3 | hypothetical protein | compare |
| PFR28_01573 | | +0.8 | 3.0 | hypothetical protein | compare |
| PFR28_01146 | | +0.8 | 2.0 | hypothetical protein | compare |
| PFR28_03666 | | +0.8 | 1.0 | hypothetical protein | compare |
| PFR28_02357 | | +0.8 | 2.4 | Bicyclomycin resistance protein | compare |
| PFR28_00842 | | +0.8 | 5.5 | Flagellar motor switch protein FliM | compare |
| PFR28_01460 | | +0.8 | 0.8 | Glutamine transport ATP-binding protein GlnQ | compare |
| PFR28_01969 | | +0.7 | 1.3 | hypothetical protein | compare |
| PFR28_03161 | | +0.7 | 1.0 | tRNA-Arg | compare |
| PFR28_02455 | | +0.7 | 2.4 | hypothetical protein | compare |
| PFR28_00808 | | +0.7 | 4.2 | hypothetical protein | compare |
| PFR28_00436 | | +0.7 | 1.3 | hypothetical protein | compare |
| PFR28_00945 | | +0.7 | 2.0 | hypothetical protein | compare |
| PFR28_01219 | | +0.7 | 2.3 | hypothetical protein | compare |
| PFR28_04992 | | +0.7 | 0.7 | hypothetical protein | compare |
| PFR28_02994 | | +0.7 | 3.9 | L-arabinose-binding periplasmic protein | compare |
| PFR28_01431 | | +0.7 | 1.4 | Chemotaxis protein CheW | compare |
| PFR28_03902 | | +0.7 | 1.0 | hypothetical protein | compare |
| PFR28_00500 | | +0.7 | 1.2 | hypothetical protein | compare |
| PFR28_04936 | | +0.7 | 2.1 | Carboxy-terminal processing protease CtpB | compare |
| PFR28_02324 | | +0.7 | 1.6 | hypothetical protein | compare |
| PFR28_04853 | | +0.7 | 1.5 | L-cystine import ATP-binding protein TcyC | compare |
| PFR28_01369 | | +0.7 | 4.6 | Methionine synthase | compare |
| PFR28_00689 | | +0.7 | 5.7 | L-aspartate oxidase | compare |
| PFR28_04154 | | +0.7 | 1.7 | HTH-type transcriptional regulator CdhR | compare |
| PFR28_02408 | | +0.7 | 3.9 | hypothetical protein | compare |
| PFR28_00829 | | +0.7 | 3.1 | Signal transduction histidine-protein kinase AtoS | compare |
| PFR28_00796 | | +0.7 | 3.4 | hypothetical protein | compare |
| PFR28_04420 | | +0.7 | 3.6 | Ribonuclease PH | compare |
| PFR28_02996 | | +0.7 | 4.1 | 6-deoxy-6-sulfogluconolactonase | compare |
| PFR28_00296 | | +0.7 | 2.8 | Cytoskeleton protein RodZ | compare |
| PFR28_00764 | | +0.7 | 1.6 | hypothetical protein | compare |
| PFR28_00756 | | +0.7 | 1.2 | ATP-dependent RNA helicase RhlE | compare |
| PFR28_03136 | | +0.7 | 1.6 | hypothetical protein | compare |
| PFR28_00247 | | +0.7 | 2.3 | hypothetical protein | compare |
| PFR28_03504 | | +0.7 | 2.5 | DNA-binding protein | compare |
| PFR28_03251 | | +0.7 | 5.6 | Flagellar hook protein FlgE | compare |
| PFR28_01646 | | +0.6 | 1.1 | hypothetical protein | compare |
| PFR28_03723 | | +0.6 | 3.9 | Aspartate 1-decarboxylase | compare |
| PFR28_00598 | | +0.6 | 5.3 | hypothetical protein | compare |
| PFR28_04182 | | +0.6 | 1.8 | hypothetical protein | compare |
| PFR28_04403 | | +0.6 | 1.4 | hypothetical protein | compare |
| PFR28_02138 | | +0.6 | 1.8 | hypothetical protein | compare |
| PFR28_02678 | | +0.6 | 1.2 | hypothetical protein | compare |
| PFR28_02451 | | +0.6 | 1.9 | Biotin biosynthesis cytochrome P450 | compare |
| PFR28_00405 | | +0.6 | 0.8 | hypothetical protein | compare |
| PFR28_00605 | | +0.6 | 4.7 | hypothetical protein | compare |
| PFR28_01387 | | +0.6 | 1.3 | 2-iminobutanoate/2-iminopropanoate deaminase | compare |
| PFR28_01271 | | +0.6 | 2.7 | Glutamine synthetase | compare |
| PFR28_01134 | | +0.6 | 1.2 | Transcriptional activator protein CopR | compare |
| PFR28_03719 | | +0.6 | 2.1 | Poly(A) polymerase I | compare |
| PFR28_00068 | | +0.6 | 0.5 | hypothetical protein | compare |
| PFR28_00828 | | +0.6 | 5.5 | Anaerobic nitric oxide reductase transcription regulator NorR | compare |
| PFR28_04335 | | +0.6 | 2.2 | CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase | compare |
| PFR28_00248 | | +0.6 | 2.3 | hypothetical protein | compare |
| PFR28_05006 | | +0.6 | 5.5 | Penicillin-binding protein 1A | compare |
| PFR28_04969 | | +0.6 | 1.7 | Glycine betaine transport ATP-binding protein OpuAA | compare |
| PFR28_01162 | | +0.6 | 1.1 | hypothetical protein | compare |
| PFR28_04924 | | +0.6 | 1.9 | putative Fe(2+)-trafficking protein | compare |
| PFR28_04105 | | +0.6 | 2.5 | DNA-binding transcriptional dual regulator ModE | compare |
| PFR28_00805 | | +0.6 | 3.2 | Flagellar basal-body rod protein FlgG | compare |
| PFR28_00601 | | +0.6 | 2.2 | hypothetical protein | compare |
| PFR28_02094 | | +0.6 | 0.9 | Glycerol-3-phosphate regulon repressor | compare |
| PFR28_00740 | | +0.6 | 1.7 | Beta-ketodecanoyl-[acyl-carrier-protein] synthase | compare |
| PFR28_01836 | | +0.6 | 1.0 | Transcriptional regulator SlyA | compare |
| PFR28_02576 | | +0.6 | 1.6 | Putative aminoacrylate peracid reductase RutC | compare |
| PFR28_03680 | | +0.6 | 0.9 | hypothetical protein | compare |
| PFR28_02403 | | +0.6 | 0.9 | Na(+)/H(+) antiporter subunit C1 | compare |
| PFR28_02726 | | +0.6 | 1.4 | hypothetical protein | compare |
| PFR28_01583 | | +0.6 | 0.7 | hypothetical protein | compare |
| PFR28_01269 | | +0.6 | 3.0 | Putrescine importer PuuP | compare |
| PFR28_00841 | | +0.6 | 3.3 | hypothetical protein | compare |
| PFR28_00948 | | +0.6 | 0.8 | hypothetical protein | compare |
| PFR28_00006 | | +0.6 | 1.7 | RecBCD enzyme subunit RecC | compare |
| PFR28_01744 | | +0.6 | 2.1 | hypothetical protein | compare |
| PFR28_03285 | | +0.6 | 2.7 | Histidine transport ATP-binding protein HisP | compare |
| PFR28_04735 | | +0.6 | 1.6 | 5S ribosomal RNA | compare |
| PFR28_04760 | | +0.6 | 3.7 | hypothetical protein | compare |
| PFR28_04286 | | +0.6 | 3.5 | hypothetical protein | compare |
| PFR28_02912 | | +0.6 | 1.9 | hypothetical protein | compare |
| PFR28_05184 | | +0.6 | 1.3 | Lipopolysaccharide export system ATP-binding protein LptB | compare |
| PFR28_03598 | | +0.6 | 3.2 | Penicillin-binding protein activator LpoA | compare |
| PFR28_05241 | | +0.6 | 2.4 | HTH-type transcriptional regulator NimR | compare |
| PFR28_00205 | | +0.6 | 2.1 | hypothetical protein | compare |
| PFR28_04358 | | +0.6 | 1.7 | hypothetical protein | compare |
| PFR28_03729 | | +0.6 | 1.6 | hypothetical protein | compare |
| PFR28_03417 | | +0.6 | 0.9 | hypothetical protein | compare |
| PFR28_00692 | | +0.6 | 3.8 | Sigma factor AlgU regulatory protein MucB | compare |
| PFR28_00678 | | +0.5 | 1.0 | hypothetical protein | compare |
| PFR28_01167 | | +0.5 | 3.1 | Putative prophage major tail sheath protein | compare |
| PFR28_02280 | | +0.5 | 1.5 | hypothetical protein | compare |
| PFR28_03252 | | +0.5 | 3.3 | Basal-body rod modification protein FlgD | compare |
| PFR28_02905 | | +0.5 | 1.7 | hypothetical protein | compare |
| PFR28_00535 | | +0.5 | 1.6 | hypothetical protein | compare |
| PFR28_00968 | | +0.5 | 0.7 | hypothetical protein | compare |
| PFR28_02785 | | +0.5 | 0.9 | hypothetical protein | compare |
| PFR28_02872 | | +0.5 | 0.7 | hypothetical protein | compare |
| PFR28_01133 | | +0.5 | 3.5 | Sensor histidine kinase CusS | compare |
| PFR28_00529 | | +0.5 | 2.3 | hypothetical protein | compare |
| PFR28_03823 | | +0.5 | 3.2 | hypothetical protein | compare |
| PFR28_03179 | | +0.5 | 0.5 | tRNA-Val | compare |
| PFR28_01769 | | +0.5 | 2.4 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha | compare |
| PFR28_02057 | | +0.5 | 1.2 | 2-oxo-tetronate isomerase | compare |
| PFR28_00388 | | +0.5 | 2.4 | Cysteine desulfuration protein SufE | compare |
| PFR28_05193 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_02539 | | +0.5 | 1.6 | Protein FecR | compare |
| PFR28_05078 | | +0.5 | 0.7 | hypothetical protein | compare |
| PFR28_02145 | | +0.5 | 4.8 | Glycogen synthase | compare |
| PFR28_00804 | | +0.5 | 3.2 | Flagellar basal-body rod protein FlgF | compare |
| PFR28_04708 | | +0.5 | 1.4 | hypothetical protein | compare |
| PFR28_00394 | | +0.5 | 3.7 | Bifunctional uridylyltransferase/uridylyl-removing enzyme | compare |
| PFR28_05246 | | +0.5 | 1.5 | hypothetical protein | compare |
| PFR28_04675 | | +0.5 | 0.4 | hypothetical protein | compare |
| PFR28_04481 | | +0.5 | 3.2 | hypothetical protein | compare |
| PFR28_05180 | | +0.5 | 1.5 | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | compare |
| PFR28_03272 | | +0.5 | 1.4 | Translational regulator CsrA2 | compare |
| PFR28_00294 | | +0.5 | 1.6 | Dual-specificity RNA methyltransferase RlmN | compare |
| PFR28_01328 | | +0.5 | 2.8 | hypothetical protein | compare |
| PFR28_03636 | | +0.5 | 1.1 | hypothetical protein | compare |
| PFR28_04460 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_01677 | | +0.5 | 2.0 | hypothetical protein | compare |
| PFR28_01157 | | +0.5 | 0.6 | hypothetical protein | compare |
| PFR28_02695 | | +0.5 | 1.4 | hypothetical protein | compare |
| PFR28_04958 | | +0.5 | 0.7 | hypothetical protein | compare |
| PFR28_03549 | | +0.5 | 0.9 | Molybdopterin synthase catalytic subunit | compare |
| PFR28_02993 | | +0.5 | 4.0 | Arabinose import ATP-binding protein AraG | compare |
| PFR28_02196 | | +0.5 | 1.7 | Thiol peroxidase | compare |
| PFR28_03300 | | +0.5 | 2.1 | CTP synthase | compare |
| PFR28_03578 | | +0.5 | 0.7 | Transcriptional activator protein CzcR | compare |
| PFR28_01446 | | +0.5 | 2.3 | hypothetical protein | compare |
| PFR28_00850 | | +0.5 | 2.7 | Signal recognition particle 54 kDa protein | compare |
| PFR28_00320 | | +0.5 | 1.9 | hypothetical protein | compare |
| PFR28_03193 | | +0.5 | 1.8 | hypothetical protein | compare |
| PFR28_04834 | | +0.5 | 3.8 | L-threonine dehydratase biosynthetic IlvA | compare |
| PFR28_04884 | | +0.5 | 1.9 | Potassium binding protein Kbp | compare |
| PFR28_03079 | | +0.5 | 3.3 | Sensor histidine kinase RcsC | compare |
| PFR28_01888 | | +0.5 | 1.4 | hypothetical protein | compare |
| PFR28_02383 | | +0.5 | 2.6 | hypothetical protein | compare |
| PFR28_05110 | | +0.5 | 2.7 | Motility protein A | compare |
| PFR28_03928 | | +0.5 | 2.0 | hypothetical protein | compare |
| PFR28_01145 | | +0.5 | 2.0 | hypothetical protein | compare |
| PFR28_01174 | | +0.5 | 1.2 | hypothetical protein | compare |
| PFR28_04806 | | +0.5 | 3.2 | hypothetical protein | compare |
| PFR28_02255 | | +0.5 | 2.1 | Toluene efflux pump outer membrane protein TtgC | compare |
| PFR28_03783 | | +0.5 | 2.5 | Transcription elongation factor GreB | compare |