Experiment set4S19 for Pseudomonas sp. RS175
D-Glucuronic acid sodium salt monohydrate carbon source 10 mM
Group: carbon sourceMedia: MME_noCarbon + D-Glucuronic acid sodium salt monohydrate (10 mM)
Culturing: Pseudomonas_RS175_ML2, 96 deep well, Aerobic, at 30 (C), shaken=1200 rpm
By: Andrew Frank on 31-January-23
Media components: 9.1 mM Potassium phosphate dibasic trihydrate, 20 mM 3-(N-morpholino)propanesulfonic acid, 4.3 mM Sodium Chloride, 10 mM Ammonium chloride, 0.41 mM Magnesium Sulfate Heptahydrate, 0.07 mM Calcium chloride dihydrate, MME Trace Minerals (0.5 mg/L EDTA tetrasodium tetrahydrate salt, 2 mg/L Ferric chloride, 0.05 mg/L Boric Acid, 0.05 mg/L Zinc chloride, 0.03 mg/L copper (II) chloride dihydrate, 0.05 mg/L Manganese (II) chloride tetrahydrate, 0.05 mg/L Diammonium molybdate, 0.05 mg/L Cobalt chloride hexahydrate, 0.05 mg/L Nickel (II) chloride hexahydrate)
Specific Phenotypes
For 10 genes in this experiment
For carbon source D-Glucuronic acid sodium salt monohydrate in Pseudomonas sp. RS175
For carbon source D-Glucuronic acid sodium salt monohydrate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Ascorbate and aldarate metabolism
- Glycolysis / Gluconeogenesis
- Pentose phosphate pathway
- Galactose metabolism
- Fatty acid metabolism
- Urea cycle and metabolism of amino groups
- Valine, leucine and isoleucine degradation
- Lysine degradation
- Arginine and proline metabolism
- Histidine metabolism
- Tryptophan metabolism
- beta-Alanine metabolism
- Nucleotide sugars metabolism
- Glycerolipid metabolism
- Pyruvate metabolism
- 1,2-Dichloroethane degradation
- Propanoate metabolism
- 3-Chloroacrylic acid degradation
- Butanoate metabolism
- Limonene and pinene degradation
- Caprolactam degradation
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: