Experiment set4S149 for Erwinia amylovora T8

Compare to:

Matrix:KB soft agar;Phage:inactivated cocktail;Temp:17;Samp:23-7

200 most important genes:

  gene name fitness t score description  
OLJFJH_05630 -4.5 -1.8 sce7726 family protein compare
OLJFJH_05510 -4.0 -3.9 ribosome-dependent GTPase TypA compare
OLJFJH_12885 -3.7 -8.9 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_10200 -3.3 -9.0 ATP-dependent RNA helicase SrmB compare
OLJFJH_12085 -3.3 -3.9 UDP-glucose 4-epimerase GalE compare
OLJFJH_10165 -3.0 -2.1 RnfH family protein compare
OLJFJH_16950 -2.9 -3.4 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_04080 -2.9 -4.3 adenine-specific DNA-methyltransferase compare
OLJFJH_05635 -2.8 -2.8 beta family protein compare
OLJFJH_14370 -2.7 -2.3 electron transport complex subunit RsxC compare
OLJFJH_10220 -2.7 -1.1 anti-sigma-E factor RseA compare
OLJFJH_05920 -2.7 -5.6 serine O-acetyltransferase compare
OLJFJH_07465 -2.6 -15.5 DNA phosphorothioation system sulfurtransferase DndC compare
OLJFJH_06545 -2.5 -4.2 NAD(P)H-flavin reductase compare
OLJFJH_16955 -2.5 -3.4 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_10500 -2.5 -6.0 IMP dehydrogenase compare
OLJFJH_07015 -2.4 -4.4 stringent starvation protein A compare
OLJFJH_13510 -2.4 -6.3 23S rRNA pseudouridine(2605) synthase RluB compare
OLJFJH_13440 -2.4 -3.1 TonB system transport protein TonB compare
OLJFJH_09065 -2.4 -1.6 thymidylate synthase compare
OLJFJH_16195 -2.3 -7.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
OLJFJH_16200 -2.3 -9.2 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
OLJFJH_07460 -2.3 -6.8 DNA sulfur modification protein DndD compare
OLJFJH_15865 -2.2 -1.8 hypothetical protein compare
OLJFJH_16965 -2.2 -4.6 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_16575 -2.2 -7.3 helix-turn-helix-type transcriptional regulator compare
OLJFJH_04305 -2.2 -1.3 DUF2756 domain-containing protein compare
OLJFJH_13530 -2.1 -2.1 HTH-type transcriptional regulator CysB compare
OLJFJH_01655 -2.1 -6.6 peptide chain release factor 3 compare
OLJFJH_11465 -2.1 -7.8 NADH-quinone oxidoreductase subunit M compare
OLJFJH_07275 -2.1 -3.5 DEAD/DEAH family ATP-dependent RNA helicase compare
OLJFJH_06525 -2.0 -3.3 Sec-independent protein translocase subunit TatC compare
OLJFJH_03945 -2.0 -1.5 peptidylprolyl isomerase compare
OLJFJH_04990 -2.0 -2.0 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_12540 -2.0 -11.7 flagellar filament capping protein FliD compare
OLJFJH_12535 -2.0 -3.7 flagellar export chaperone FliS compare
OLJFJH_10465 -2.0 -2.7 outer membrane protein assembly factor BamB compare
OLJFJH_18020 -2.0 -4.4 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_17090 -2.0 -2.8 N-acetylglucosamine-6-phosphate deacetylase compare
OLJFJH_05645 -1.9 -1.9 hypothetical protein compare
OLJFJH_16960 -1.9 -7.0 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_17320 -1.9 -10.6 cytochrome ubiquinol oxidase subunit I compare
OLJFJH_12850 -1.9 -2.1 crossover junction endodeoxyribonuclease RuvC compare
OLJFJH_06040 -1.8 -8.2 glycerol kinase GlpK compare
OLJFJH_11455 -1.8 -1.1 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_14555 -1.8 -4.6 pyruvate kinase PykF compare
OLJFJH_15640 -1.8 -3.9 flagellar biosynthesis protein FlgN compare
OLJFJH_07035 -1.8 -4.9 aerobic respiration two-component sensor histidine kinase ArcB compare
OLJFJH_02080 -1.8 -3.8 DNA-binding transcriptional repressor compare
OLJFJH_12785 -1.7 -3.7 flagellar protein FlhE compare
OLJFJH_11415 -1.7 -9.5 NADH-quinone oxidoreductase subunit B compare
OLJFJH_04910 -1.7 -1.4 hypothetical protein compare
OLJFJH_11420 -1.7 -6.8 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_11430 -1.6 -7.0 NADH-quinone oxidoreductase subunit NuoF compare
OLJFJH_11435 -1.6 -8.9 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_05870 -1.6 -7.1 lipopolysaccharide biosynthesis protein compare
OLJFJH_15575 -1.6 -6.2 flagellar hook-associated protein FlgL compare
OLJFJH_07825 -1.6 -4.9 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_16180 -1.6 -5.6 cell division protein FtsK compare
OLJFJH_00595 -1.6 -4.0 sigma E protease regulator RseP compare
OLJFJH_10170 -1.6 -2.2 outer membrane protein assembly factor BamE compare
OLJFJH_11440 -1.5 -4.8 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_15635 -1.5 -1.7 anti-sigma-28 factor FlgM compare
OLJFJH_11460 -1.5 -10.0 NADH-quinone oxidoreductase subunit L compare
OLJFJH_17325 -1.5 -4.2 cytochrome d ubiquinol oxidase subunit II compare
OLJFJH_13570 -1.5 -5.9 orotidine-5'-phosphate decarboxylase compare
OLJFJH_02090 -1.5 -6.9 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_11450 -1.5 -3.0 NADH-quinone oxidoreductase subunit J compare
OLJFJH_11410 -1.5 -5.6 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_06145 -1.5 -11.2 Si-specific NAD(P)(+) transhydrogenase compare
OLJFJH_11470 -1.5 -7.0 NADH-quinone oxidoreductase subunit NuoN compare
OLJFJH_06045 -1.5 -5.9 aquaporin compare
OLJFJH_12545 -1.5 -4.5 flagellin FliC compare
OLJFJH_07470 -1.5 -5.5 DNA sulfur modification protein DndB compare
OLJFJH_09725 -1.4 -5.8 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_11595 -1.4 -4.3 FAD:protein FMN transferase ApbE compare
OLJFJH_07265 -1.4 -4.2 polyribonucleotide nucleotidyltransferase compare
OLJFJH_17630 -1.4 -1.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
OLJFJH_00695 -1.4 -3.5 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_01770 -1.4 -7.5 hypothetical protein compare
OLJFJH_18015 -1.4 -3.9 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_07270 -1.3 -4.6 lipoprotein NlpI compare
OLJFJH_15700 -1.3 -2.5 rhodanese-related sulfurtransferase compare
OLJFJH_06780 -1.3 -8.6 phosphoribosylamine--glycine ligase compare
OLJFJH_10230 -1.3 -3.7 SoxR-reducing system protein RseC compare
OLJFJH_06785 -1.3 -8.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
OLJFJH_09445 -1.3 -1.5 AraC family transcriptional regulator compare
OLJFJH_11240 -1.2 -4.8 tRNA pseudouridine(38-40) synthase TruA compare
OLJFJH_09105 -1.2 -2.9 exodeoxyribonuclease V subunit alpha compare
OLJFJH_07320 -1.2 -5.5 2-iminobutanoate/2-iminopropanoate deaminase compare
OLJFJH_13885 -1.2 -3.8 hypothetical protein compare
OLJFJH_03565 -1.2 -6.5 zinc uptake transcriptional repressor Zur compare
OLJFJH_07060 -1.2 -4.1 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_15990 -1.2 -5.2 quinone-dependent dihydroorotate dehydrogenase compare
OLJFJH_00690 -1.2 -4.4 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_07160 -1.2 -2.4 hypothetical protein compare
OLJFJH_08835 -1.1 -2.9 site-specific tyrosine recombinase XerD compare
OLJFJH_16780 -1.1 -2.6 6-phosphogluconolactonase compare
OLJFJH_07070 -1.1 -5.9 RNA polymerase factor sigma-54 compare
OLJFJH_15580 -1.1 -6.9 flagellar hook-associated protein FlgK compare
OLJFJH_17775 -1.1 -7.7 EamA-like transporter family compare
OLJFJH_00700 -1.1 -2.0 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_15720 -1.1 -8.0 glucan biosynthesis glucosyltransferase H compare
OLJFJH_08795 -1.1 -6.7 hydrolase compare
OLJFJH_10860 -1.1 -1.3 phosphocarrier protein Hpr compare
OLJFJH_05495 -1.1 -6.4 nitrogen regulation protein NR(I) compare
OLJFJH_03535 -1.1 -1.0 hypothetical protein compare
OLJFJH_18010 -1.1 -4.4 cytochrome o ubiquinol oxidase subunit I compare
OLJFJH_16980 -1.1 -6.9 citrate synthase compare
OLJFJH_05910 -1.1 -5.0 protein-export chaperone SecB compare
OLJFJH_10850 -1.0 -2.3 PTS glucose transporter subunit IIA compare
OLJFJH_17870 -1.0 -2.7 hypothetical protein compare
OLJFJH_03450 -1.0 -3.1 aromatic amino acid aminotransferase compare
OLJFJH_16705 -1.0 -1.4 molybdopterin synthase catalytic subunit MoaE compare
OLJFJH_11425 -1.0 -1.8 NADH-quinone oxidoreductase subunit NuoE compare
OLJFJH_12930 -1.0 -1.5 DNA polymerase III subunit theta compare
OLJFJH_11445 -1.0 -2.4 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_03200 -1.0 -5.9 TonB-dependent siderophore receptor compare
OLJFJH_05565 -1.0 -1.2 DNA-directed RNA polymerase subunit omega compare
OLJFJH_06320 -1.0 -3.7 lipid III flippase WzxE compare
OLJFJH_05730 -1.0 -0.6 hypothetical protein compare
OLJFJH_17635 -1.0 -6.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
OLJFJH_08615 -1.0 -1.3 putative double-glycine leader peptidase C39-like (CLD) domain compare
OLJFJH_01595 -1.0 -3.4 phosphoserine phosphatase compare
OLJFJH_15520 -1.0 -4.0 beta-ketoacyl-ACP synthase II compare
OLJFJH_15725 -1.0 -3.9 glucan biosynthesis protein G compare
OLJFJH_06395 -1.0 -4.0 class I adenylate cyclase compare
OLJFJH_15570 -0.9 -4.2 ribonuclease E compare
OLJFJH_07380 -0.9 -5.2 leucyl aminopeptidase compare
OLJFJH_15670 -0.9 -4.0 dihydroorotase compare
OLJFJH_02125 -0.9 -1.0 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD compare
OLJFJH_15005 -0.9 -1.2 type III secretion system export apparatus subunit SctS compare
OLJFJH_17810 -0.9 -2.0 YbaB/EbfC family nucleoid-associated protein compare
OLJFJH_10645 -0.9 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
OLJFJH_06205 -0.9 -1.6 Protein of unknown function DUF compare
OLJFJH_18025 -0.9 -2.6 heme o synthase compare
OLJFJH_02500 -0.9 -3.4 RNA chaperone Hfq compare
OLJFJH_10430 -0.9 -1.4 nucleoside-diphosphate kinase compare
OLJFJH_06415 -0.9 -2.6 tyrosine recombinase XerC compare
OLJFJH_13785 -0.9 -2.2 DUF333 domain-containing protein compare
OLJFJH_16450 -0.9 -1.5 DksA/TraR family C4-type zinc finger protein compare
OLJFJH_16220 -0.9 -4.1 ATP-dependent Clp protease adapter ClpS compare
OLJFJH_10305 -0.9 -6.3 phosphoribosylformylglycinamidine synthase compare
OLJFJH_18095 -0.9 -3.8 transcriptional regulator NrdR compare
OLJFJH_07000 -0.9 -5.9 cell division protein ZapE compare
OLJFJH_11360 -0.9 -3.2 phosphate acetyltransferase compare
OLJFJH_09390 -0.9 -0.6 Transposase compare
OLJFJH_02480 -0.9 -2.0 DUF2065 domain-containing protein compare
OLJFJH_13285 -0.9 -4.7 two-component system response regulator RssB compare
OLJFJH_06270 -0.8 -2.4 thioredoxin TrxA compare
OLJFJH_01270 -0.8 -4.6 catabolite repressor/activator compare
OLJFJH_10590 -0.8 -3.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
OLJFJH_08275 -0.8 -1.1 hypothetical protein compare
OLJFJH_13905 -0.8 -1.4 DUF2534 domain-containing protein compare
OLJFJH_16940 -0.8 -3.9 ADP-forming succinate--CoA ligase subunit beta compare
OLJFJH_10560 -0.8 -4.2 exopolyphosphatase compare
OLJFJH_16190 -0.8 -3.9 thioredoxin-disulfide reductase compare
OLJFJH_16205 -0.8 -3.5 leucyl/phenylalanyl-tRNA--protein transferase compare
OLJFJH_01710 -0.8 -2.0 hypothetical protein compare
OLJFJH_17845 -0.8 -4.5 multidrug efflux transporter transcriptional repressor AcrR compare
OLJFJH_02505 -0.8 -2.7 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
OLJFJH_13130 -0.8 -0.9 hypothetical protein compare
OLJFJH_11365 -0.8 -2.9 acetate kinase compare
OLJFJH_17780 -0.8 -3.2 DUF6024 domain-containing protein compare
OLJFJH_07090 -0.8 -2.5 3-deoxy-manno-octulosonate-8-phosphatase KdsC compare
OLJFJH_06640 -0.8 -2.0 elongation factor Tu compare
OLJFJH_03740 -0.8 -0.8 alternative ribosome-rescue factor A compare
OLJFJH_14950 -0.8 -3.3 redox-regulated ATPase YchF compare
OLJFJH_18405 -0.7 -1.5 glutamate-5-semialdehyde dehydrogenase compare
OLJFJH_10245 -0.7 -2.2 translation elongation factor 4 compare
OLJFJH_02365 -0.7 -3.7 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
OLJFJH_17745 -0.7 -0.6 hypothetical protein compare
OLJFJH_13970 -0.7 -1.5 hypothetical protein compare
OLJFJH_07875 -0.7 -3.6 Membrane protein compare
OLJFJH_17830 -0.7 -2.4 prephenate dehydrogenase compare
OLJFJH_08810 -0.7 -2.6 FAD assembly factor SdhE compare
OLJFJH_12530 -0.7 -2.7 flagella biosynthesis regulatory protein FliT compare
OLJFJH_07215 -0.7 -2.4 preprotein translocase subunit SecG compare
OLJFJH_10640 -0.7 -3.1 outer membrane protein assembly factor BamC compare
OLJFJH_06310 -0.7 -2.9 dTDP-4-amino-4 6-dideoxy-D-galactose acyltransferase compare
OLJFJH_17605 -0.7 -1.0 ribosome-associated protein YbcJ compare
OLJFJH_10685 -0.7 -1.0 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_00815 -0.7 -2.0 hypoxanthine phosphoribosyltransferase compare
OLJFJH_12160 -0.7 -0.6 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase compare
OLJFJH_10715 -0.7 -0.4 hypothetical protein compare
OLJFJH_05525 -0.7 -1.1 D-aminoacyl-tRNA deacylase compare
OLJFJH_08840 -0.7 -5.0 bifunctional protein-disulfide isomerase/oxidoreductase DsbC compare
OLJFJH_07870 -0.7 -4.8 GntR family transcriptional regulator compare
OLJFJH_10825 -0.7 -4.2 sulfate/thiosulfate ABC transporter permease CysW compare
OLJFJH_05465 -0.7 -3.6 thiol:disulfide interchange protein DsbA compare
OLJFJH_08735 -0.7 -3.7 phosphoglycerate dehydrogenase compare
OLJFJH_15555 -0.7 -1.2 23S rRNA accumulation protein YceD compare
OLJFJH_14270 -0.7 -3.3 dethiobiotin synthase compare
OLJFJH_01380 -0.7 -2.9 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH compare
OLJFJH_01995 -0.7 -1.5 DUF2931 domain-containing protein compare
OLJFJH_16325 -0.7 -1.3 DUF1418 domain-containing protein compare
OLJFJH_11230 -0.7 -1.6 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_11280 -0.7 -4.2 amidophosphoribosyltransferase compare
OLJFJH_16685 -0.7 -3.1 ATP-dependent RNA helicase RhlE compare
OLJFJH_15090 -0.7 -0.8 Conserved uncharacterized protein compare


Specific Phenotypes

None in this experiment