Experiment set4IT082 for Pseudomonas simiae WCS417

Compare to:

LB with Lomefloxacin hydrochloride 0.0001 mM

200 most important genes:

  gene name fitness t score description  
PS417_05815 -5.6 -5.4 recombinase RecA compare
PS417_05975 -3.1 -2.5 chemotaxis protein CheW compare
PS417_24155 -3.1 -3.6 ATP-binding protein compare
PS417_04375 -2.9 -5.1 ABC transporter ATP-binding protein compare
PS417_23950 -2.9 -4.5 polynucleotide phosphorylase/polyadenylase compare
PS417_04650 -2.9 -2.2 D-alanine--D-alanine ligase compare
PS417_20985 -2.8 -4.5 porin compare
PS417_23770 -2.5 -2.1 exodeoxyribonuclease V subunit alpha compare
PS417_12595 -2.4 -2.4 transcriptional regulator compare
PS417_27870 -2.3 -5.0 ATP-dependent DNA helicase RecG compare
PS417_07710 -2.2 -8.8 membrane protein compare
PS417_06770 -2.1 -5.5 multidrug transporter compare
PS417_22445 -2.1 -5.1 ATP-dependent DNA helicase RuvB compare
PS417_28070 -2.0 -5.6 phosphate ABC transporter ATP-binding protein compare
PS417_04385 -2.0 -7.8 organic solvent ABC transporter substrate-binding protein compare
PS417_05695 -1.9 -5.1 transcriptional regulator compare
PS417_02210 -1.9 -8.4 diguanylate cyclase compare
PS417_04390 -1.8 -7.1 toluene tolerance protein compare
PS417_09210 -1.8 -2.3 TetR family transcriptional regulator compare
PS417_08410 -1.8 -2.2 hypothetical protein compare
PS417_04380 -1.6 -2.8 ABC transporter permease compare
PS417_17780 -1.5 -2.0 Ais protein compare
PS417_28080 -1.5 -8.0 phosphate ABC transporter permease compare
PS417_05985 -1.5 -4.3 chemotaxis protein CheY compare
PS417_16490 -1.5 -2.7 cell division protein FtsK compare
PS417_02255 -1.4 -2.6 lipopolysaccharide kinase compare
PS417_19675 -1.4 -5.1 chemotaxis protein CheY compare
PS417_06775 -1.4 -4.2 antibiotic transporter compare
PS417_27795 -1.4 -1.5 orotate phosphoribosyltransferase compare
PS417_15115 -1.4 -4.9 exonuclease SbcD compare
PS417_27865 -1.3 -2.3 LysR family transcriptional regulator compare
PS417_15120 -1.3 -6.7 chromosome segregation protein SMC compare
PS417_24030 -1.3 -2.5 MFS transporter compare
PS417_02280 -1.3 -2.4 GlcNAc-PI de-N-acetylase compare
PS417_10305 -1.3 -3.4 hypothetical protein compare
PS417_02270 -1.2 -5.4 carbamoyltransferase compare
PS417_03380 -1.2 -1.8 hypothetical protein compare
PS417_14980 -1.2 -1.2 universal stress protein UspA compare
PS417_05520 -1.2 -6.8 histidine kinase compare
PS417_04365 -1.2 -1.5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_01570 -1.1 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_03100 -1.1 -1.3 pilus assembly protein compare
PS417_02555 -1.1 -8.6 exoribonuclease R compare
PS417_22565 -1.1 -1.4 formyltetrahydrofolate deformylase compare
PS417_06375 -1.1 -1.0 deoxycytidine triphosphate deaminase compare
PS417_15975 -1.1 -2.1 glutamate carboxypeptidase compare
PS417_05525 -1.1 -4.0 Fis family transcriptional regulator compare
PS417_27800 -1.0 -4.4 exodeoxyribonuclease III compare
PS417_08730 -1.0 -2.6 cytochrome C compare
PS417_07510 -1.0 -5.4 aspartyl beta-hydroxylase compare
PS417_14805 -1.0 -1.5 AraC family transcriptional regulator compare
PS417_26695 -1.0 -1.4 uracil phosphoribosyltransferase compare
PS417_08540 -1.0 -2.8 RNA helicase compare
PS417_20715 -1.0 -3.1 cytochrome Cbb3 compare
PS417_24070 -1.0 -6.1 recombination and repair protein compare
PS417_08125 -1.0 -1.1 prephenate dehydratase compare
PS417_13425 -1.0 -2.2 cupin compare
PS417_27245 -1.0 -3.9 aminotransferase DegT compare
PS417_19625 -1.0 -2.5 histidine kinase compare
PS417_00510 -1.0 -1.4 membrane protein compare
PS417_05500 -1.0 -2.3 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
PS417_20585 -1.0 -4.4 chemotaxis protein compare
PS417_13175 -1.0 -1.4 iron transporter compare
PS417_09325 -1.0 -3.2 peptidase S41 compare
PS417_17215 -0.9 -2.4 peptidylprolyl isomerase compare
PS417_03930 -0.9 -4.8 thymidine phosphorylase compare
PS417_21425 -0.9 -1.8 4-amino-4-deoxychorismate lyase compare
PS417_03875 -0.9 -2.6 membrane protein compare
PS417_28085 -0.9 -5.4 phosphate-binding protein compare
PS417_22825 -0.9 -2.8 hypothetical protein compare
PS417_06125 -0.9 -2.2 hypothetical protein compare
PS417_19425 -0.9 -1.0 allantoicase compare
PS417_23095 -0.9 -1.1 exodeoxyribonuclease compare
PS417_15540 -0.8 -1.0 NUDIX hydrolase compare
PS417_02695 -0.8 -2.0 protein hupE compare
PS417_05505 -0.8 -4.3 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
PS417_13305 -0.8 -1.5 hypothetical protein compare
PS417_22575 -0.8 -5.5 exonuclease I compare
PS417_19095 -0.8 -1.5 hypothetical protein compare
PS417_01565 -0.8 -3.6 imidazole glycerol phosphate synthase compare
PS417_04590 -0.8 -4.9 methyltransferase compare
PS417_18540 -0.8 -2.9 colicin V production CvpA compare
PS417_11455 -0.8 -2.7 hypothetical protein compare
PS417_15745 -0.8 -1.9 lipid carrier protein compare
PS417_14870 -0.8 -3.3 transporter compare
PS417_23900 -0.8 -5.4 poly(A) polymerase compare
PS417_27595 -0.8 -2.1 recombinase XerC compare
PS417_14960 -0.8 -5.1 ATPase compare
PS417_15090 -0.8 -1.5 hypothetical protein compare
PS417_23160 -0.8 -2.6 50S rRNA methyltransferase compare
PS417_14925 -0.8 -2.4 2-methylcitrate dehydratase compare
PS417_23775 -0.8 -0.6 exodeoxyribonuclease V subunit beta compare
PS417_10810 -0.8 -1.4 hypothetical protein compare
PS417_15875 -0.7 -1.8 LuxR family transcriptional regulator compare
PS417_26985 -0.7 -4.0 phosphoenolpyruvate-protein phosphotransferase compare
PS417_13120 -0.7 -3.3 aspartyl beta-hydroxylase compare
PS417_22840 -0.7 -1.8 tRNA-Met compare
PS417_28515 -0.7 -2.0 16S rRNA methyltransferase compare
PS417_05140 -0.7 -1.7 dipicolinate synthase compare
PS417_05510 -0.7 -3.3 alpha/beta hydrolase compare
PS417_27195 -0.7 -0.8 N-acetylglutamate synthase compare
PS417_13820 -0.7 -3.2 UDP-glucose 6-dehydrogenase compare
PS417_24895 -0.7 -1.2 hypothetical protein compare
PS417_19195 -0.7 -2.0 hypothetical protein compare
PS417_06530 -0.7 -2.3 membrane protein compare
PS417_18845 -0.7 -1.1 peptidase compare
PS417_06355 -0.7 -1.8 protein-L-isoaspartate O-methyltransferase compare
PS417_16195 -0.7 -0.8 AraC family transcriptional regulator compare
PS417_21090 -0.7 -1.5 hypothetical protein compare
PS417_22190 -0.7 -3.3 diguanylate cyclase compare
PS417_12855 -0.7 -1.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_10045 -0.7 -1.7 hypothetical protein compare
PS417_26240 -0.7 -1.3 N-methylproline demethylase compare
PS417_26815 -0.7 -1.1 peptidase M16 compare
PS417_02225 -0.7 -1.6 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_27100 -0.7 -2.8 phosphohydrolase compare
PS417_25825 -0.6 -1.9 sulfurtransferase compare
PS417_08580 -0.6 -3.7 histidine kinase compare
PS417_10910 -0.6 -2.3 FAD-dependent oxidoreductase compare
PS417_19190 -0.6 -2.4 BolA family transcriptional regulator compare
PS417_24835 -0.6 -2.2 hypothetical protein compare
PS417_17925 -0.6 -0.9 acyl-CoA dehydrogenase compare
PS417_06500 -0.6 -1.3 hypothetical protein compare
PS417_08090 -0.6 -1.1 3-oxoacyl-ACP reductase compare
PS417_07095 -0.6 -3.5 histidine kinase compare
PS417_12915 -0.6 -1.5 DNA-binding protein compare
PS417_08045 -0.6 -1.6 uracil permease compare
PS417_17110 -0.6 -3.1 spore coat protein compare
PS417_22690 -0.6 -2.5 phosphogluconate dehydratase compare
PS417_02720 -0.6 -0.8 TetR family transcriptional regulator compare
PS417_25220 -0.6 -2.4 iron-hydroxamate ABC transporter substrate-binding protein compare
PS417_10225 -0.6 -2.8 chitinase compare
PS417_13620 -0.6 -1.4 thermostable hemolysin compare
PS417_05820 -0.6 -1.8 recombinase RecX compare
PS417_28075 -0.6 -1.7 phosphate ABC transporter permease compare
PS417_20785 -0.6 -3.4 transcriptional regulator compare
PS417_02495 -0.6 -3.0 GTPase HflX compare
PS417_13055 -0.6 -1.5 aminotransferase compare
PS417_01965 -0.6 -1.1 fimbriae biosynthesis protein compare
PS417_19800 -0.6 -1.6 flagellar motor switch protein FliG compare
PS417_22205 -0.6 -3.8 potassium transporter TrkH compare
PS417_02980 -0.6 -1.0 chemotaxis protein compare
PS417_06845 -0.6 -1.1 lipoprotein compare
PS417_17860 -0.6 -2.1 2-oxo-hepta-3-ene-1,7-dioate hydratase compare
PS417_15100 -0.6 -1.2 BatB protein compare
PS417_09930 -0.6 -1.2 hypothetical protein compare
PS417_27135 -0.6 -0.7 glutamine synthetase compare
PS417_04080 -0.6 -0.9 peptide ABC transporter substrate-binding protein compare
PS417_13795 -0.6 -2.2 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_07845 -0.6 -1.1 transcriptional regulator compare
PS417_22855 -0.6 -2.8 ssDNA exonuclease RecJ compare
PS417_23380 -0.6 -1.3 cytochrome o ubiquinol oxidase subunit III compare
PS417_21010 -0.6 -2.7 ribonuclease activity regulator protein RraA compare
PS417_10425 -0.6 -1.2 hypothetical protein compare
PS417_12735 -0.6 -1.1 peroxidase compare
PS417_05840 -0.6 -1.7 LuxR family transcriptional regulator compare
PS417_09140 -0.6 -1.7 biopolymer transporter ExbB compare
PS417_09305 -0.5 -2.0 hypothetical protein compare
PS417_20140 -0.5 -1.9 nucleoprotein/polynucleotide-associated enzyme compare
PS417_15455 -0.5 -1.9 ABC transporter substrate-binding protein compare
PS417_10050 -0.5 -1.6 hypothetical protein compare
PS417_11930 -0.5 -3.2 hypothetical protein compare
PS417_13755 -0.5 -1.2 oxidoreductase compare
PS417_06635 -0.5 -0.9 ferredoxin compare
PS417_14515 -0.5 -1.2 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_15655 -0.5 -1.9 hypothetical protein compare
PS417_09610 -0.5 -2.4 beta-xylosidase compare
PS417_07560 -0.5 -1.0 universal stress protein UspA compare
PS417_00180 -0.5 -1.7 tryptophan synthase subunit alpha compare
PS417_16665 -0.5 -1.2 hypothetical protein compare
PS417_24305 -0.5 -2.8 DNA repair protein RadA compare
PS417_18150 -0.5 -1.8 chemotaxis protein CheY compare
PS417_24135 -0.5 -0.9 hypothetical protein compare
PS417_21515 -0.5 -2.8 transcriptional regulator compare
PS417_24705 -0.5 -1.8 D-alanyl-D-alanine carboxypeptidase compare
PS417_04585 -0.5 -1.0 hypothetical protein compare
PS417_17585 -0.5 -1.9 ornithine cyclodeaminase compare
PS417_19430 -0.5 -1.4 ureidoglycolate hydrolase compare
PS417_23825 -0.5 -2.9 penicillin-binding protein compare
PS417_18195 -0.5 -2.0 3-(3-hydroxyphenyl)propionate hydroxylase compare
PS417_17630 -0.5 -0.9 RNA polymerase sigma factor compare
PS417_21495 -0.5 -1.8 lipoprotein compare
PS417_22795 -0.5 -0.6 exclusion suppressor FxsA compare
PS417_16935 -0.5 -2.2 diguanylate phosphodiesterase compare
PS417_08135 -0.5 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_17330 -0.5 -1.7 Dihydropyrimidine dehydrogenase (NADP(+)) (EC 1.3.1.2) (from data) compare
PS417_00405 -0.5 -3.5 DNA polymerase I compare
PS417_01185 -0.5 -2.2 ribosomal protein S6 modification protein compare
PS417_26290 -0.5 -1.7 4-hydroxybenzoyl-CoA thioesterase compare
PS417_23995 -0.5 -0.6 preprotein translocase subunit SecG compare
PS417_05830 -0.5 -1.8 hypothetical protein compare
PS417_03940 -0.5 -2.1 membrane protein compare
PS417_09615 -0.5 -2.8 glycosyl transferase family 1 compare
PS417_15085 -0.5 -2.3 ATPase AAA compare
PS417_14590 -0.5 -0.8 LysR family transcriptional regulator compare
PS417_19630 -0.5 -1.4 LuxR family transcriptional regulator compare
PS417_26520 -0.5 -2.5 amino acid ABC transporter substrate-binding protein compare
PS417_26850 -0.5 -0.5 twin-arginine translocation pathway signal protein compare
PS417_17450 -0.5 -1.4 amino acid ABC transporter substrate-binding protein compare
PS417_18800 -0.5 -1.5 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Lomefloxacin hydrochloride in Pseudomonas simiae WCS417

For stress Lomefloxacin hydrochloride across organisms