Experiment set4IT082 for Agrobacterium fabrum C58

Compare to:

R2A with Hydrogen peroxide 0.1 mM

200 most important genes:

  gene name fitness t score description  
Atu3469 -3.6 -3.5 phosphoglyceromutase compare
Atu5430 -3.6 -2.4 hypothetical protein compare
Atu2057 -3.5 -3.4 DNA helicase II compare
Atu1688 -3.1 -4.2 indole-3-glycerol-phosphate synthase compare
Atu0017 -2.9 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2684 -2.8 -2.3 hypothetical protein compare
Atu2289 -2.5 -11.1 anthranilate synthase component I and II compare
Atu0400 -2.3 -5.5 orotate phosphoribosyltransferase compare
Atu0346 -2.2 -4.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2394 -2.1 -5.6 Regulator of Biofilm formation, Fnr Family compare
Atu1687 -2.0 -4.5 anthranilate phosphoribosyltransferase compare
Atu1307 -2.0 -7.4 dihydroorotase compare
Atu1874 -1.9 -2.7 RecA protein compare
Atu0434 -1.9 -2.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0399 -1.7 -6.1 dihydroorotase compare
Atu1446 -1.5 -2.2 two component response regulator compare
Atu3183 -1.5 -1.3 hypothetical protein compare
Atu0073 -1.5 -6.5 recF-like protein compare
Atu0051 -1.5 -4.8 two component sensor kinase compare
Atu8088 -1.4 -1.5 hypothetical protein compare
Atu4144 -1.4 -1.6 hypothetical protein compare
Atu1030 -1.4 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2710 -1.4 -5.7 hypothetical protein compare
Atu1359 -1.4 -1.3 dnaK deletion suppressor protein compare
Atu1308 -1.3 -5.7 aspartate carbamoyl transferase catalytic subunit compare
Atu2040 -1.3 -3.6 phosphoserine phosphatase compare
Atu3754 -1.3 -6.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0103 -1.3 -8.0 penicillin-binding protein compare
Atu0972 -1.3 -3.5 lipA protein compare
Atu8087 -1.2 -1.5 putative peptidoglycan binding protein compare
Atu0471 -1.2 -4.3 hypothetical protein compare
Atu1891 -1.2 -4.1 cobalamin biosynthesis protein compare
Atu2464 -1.2 -3.1 formyltetrahydrofolate deformylase compare
Atu1028 -1.2 -3.0 hypothetical protein compare
Atu3634 -1.2 -3.7 penicillin-binding protein dacf precursor compare
Atu0953 -1.2 -1.6 hypothetical protein compare
Atu0941 -1.2 -1.0 hypothetical protein compare
Atu1686 -1.2 -6.6 peptidyl-prolyl cis-trans isomerse D compare
Atu1904 -1.2 -1.4 transcriptional regulator compare
Atu2728 -1.2 -2.7 beta (1-->2) glucan export ATP-binding protein compare
Atu0486 -1.2 -5.1 dihydroorotate dehydrogenase compare
Atu1163 -1.1 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4896 -1.1 -2.8 acetyltransferase compare
Atu3730 -1.1 -1.3 hypothetical protein compare
Atu0189 -1.1 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0039 -1.1 -1.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu3727 -1.1 -3.7 hypothetical protein compare
Atu1588 -1.1 -4.8 homoserine dehydrogenase compare
Atu0354 -1.0 -2.2 ferric uptake regulator compare
Atu1589 -1.0 -4.1 aminotransferase, class I compare
Atu1254 -1.0 -1.9 transcriptional regulator, ArsR family compare
Atu0298 -1.0 -4.0 orotidine 5 compare
Atu1468 -1.0 -5.1 hypothetical protein compare
Atu3712 -1.0 -1.2 hypothetical protein compare
Atu0093 -1.0 -2.9 Recombination protein compare
Atu1844 -1.0 -1.9 Phosphoribosylformylglycinamidine synthetase compare
Atu0470 -1.0 -2.3 hypothetical protein compare
Atu4616 -0.9 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu1077 -0.9 -2.5 DNA repair protein compare
Atu1327 -0.9 -2.5 NADH-ubiquinone oxidoreductase compare
Atu1039 -0.9 -2.4 DNA repair protein RecO compare
Atu1602 -0.9 -3.9 transcriptional activator, Crp family compare
Atu2036 -0.9 -6.4 acetolactate synthase III, large subunit compare
Atu8018 -0.9 -0.8 hypothetical protein compare
Atu1129 -0.9 -3.7 excinuclease ABC chain C compare
Atu0777 -0.9 -0.8 hypothetical protein compare
Atu2790 -0.9 -2.2 3-isopropylmalate dehydratase, small subunit compare
Atu2067 -0.9 -1.1 hypothetical protein compare
Atu0050 -0.9 -2.5 two component response regulator compare
Atu0566 -0.9 -1.4 hypothetical protein compare
Atu0206 -0.9 -1.6 hypothetical protein compare
Atu0190 -0.9 -5.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0535 -0.8 -3.3 hypothetical protein compare
Atu0422 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu8052 -0.8 -0.7 hypothetical protein compare
Atu2207 -0.8 -4.0 two component sensor kinase compare
Atu0361 -0.8 -2.1 transcriptional regulator compare
Atu0977 -0.8 -3.1 serine protease DO-like protease compare
Atu4884 -0.8 -2.1 hypothetical protein compare
Atu0115 -0.8 -0.8 hypothetical protein compare
Atu3579 -0.8 -2.3 lactoylglutathione lyase compare
Atu0598 -0.8 -4.9 phosphogluconate dehydratase compare
Atu4854 -0.8 -3.2 hypothetical protein compare
Atu2083 -0.8 -1.4 DNA repair protein RecN compare
Atu1714 -0.8 -1.2 exonuclease III compare
Atu0188 -0.8 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu4882 -0.8 -2.1 hypothetical protein compare
Atu1774 -0.8 -4.2 ABC transporter, substrate binding protein (peptide) compare
Atu8191 -0.8 -1.4 hypothetical protein compare
Atu1685 -0.8 -0.8 hypothetical protein compare
Atu4613 -0.8 -5.7 glycosyltransferase compare
Atu0647 -0.8 -2.4 phosphoribosylamine--glycine ligase compare
Atu2130 -0.8 -2.7 hypothetical protein compare
Atu1850 -0.8 -2.9 phosphoribosylformylglycinamidine synthetase II compare
Atu2802 -0.7 -4.2 precorrin-8X methylmutase compare
Atu4179 -0.7 -2.5 hypothetical protein compare
Atu0421 -0.7 -1.1 ABC transporter, membrane spanning protein compare
Atu3483 -0.7 -3.0 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1470 -0.7 -1.0 Camphor resistance protein compare
Atu2439 -0.7 -0.9 hypothetical protein compare
Atu2073 -0.7 -3.1 membrane protein compare
Atu4618 -0.7 -4.9 dTDP-rhamnose-3,5-epimerase compare
Atu2578 -0.7 -2.1 cAMP-dependent protein kinase regulatory subunit compare
Atu0976 -0.7 -1.8 cycL protein compare
Atu2183 -0.7 -4.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2063 -0.7 -1.7 hypothetical protein compare
Atu3468 -0.7 -0.8 hypothetical protein compare
Atu2793 -0.7 -2.7 cobyrinic acid a,c-diamide synthase compare
Atu4567 -0.7 -3.1 ROK family transcriptional regulator compare
Atu0606 -0.7 -1.6 hypothetical protein compare
Atu2809 -0.7 -3.7 cobalamin biosynthesis protein compare
Atu0184 -0.7 -1.9 glucokinase compare
Atu0201 -0.7 -1.1 hypothetical protein compare
Atu1355 -0.7 -2.1 hypothetical protein compare
Atu3230 -0.7 -2.2 hypothetical protein compare
Atu0040 -0.7 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2800 -0.7 -1.1 precorrin-3B C17-methyltransferase compare
Atu0386 -0.7 -1.3 hypothetical protein compare
Atu4773 -0.7 -1.3 two component response regulator compare
Atu3755 -0.7 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1518 -0.7 -1.9 transcriptional regulator, Fur family compare
Atu0029 -0.7 -2.3 S-adenosylhomocysteine hydrolase compare
Atu0769 -0.7 -1.3 protoheme IX farnesyltransferase compare
Atu3014 -0.7 -1.4 hypothetical protein compare
Atu1983 -0.7 -3.7 hypothetical protein compare
Atu4866 -0.6 -4.0 hypothetical protein compare
Atu0095 -0.6 -2.0 hypothetical protein compare
Atu4493 -0.6 -2.4 hypothetical protein compare
Atu2798 -0.6 -1.7 precorrin-6y methyltransferase compare
Atu1722 -0.6 -2.7 hypothetical protein compare
Atu2477 -0.6 -2.4 DNA oxidation protective protein, not DNA-binding compare
Atu4317 -0.6 -1.9 TetR family transcriptional regulator compare
Atu3287 -0.6 -2.1 thiamine biosynthesis associated protein compare
Atu0943 -0.6 -1.6 hypothetical protein compare
Atu0460 -0.6 -3.5 hypothetical protein compare
Atu0185 -0.6 -2.1 methylglyoxal synthase compare
Atu1495 -0.6 -1.7 hypothetical protein compare
Atu2650 -0.6 -4.3 glycerol-3-phosphate dehydrogenase compare
Atu2548 -0.6 -4.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2368 -0.6 -1.0 hypothetical protein compare
Atu4108 -0.6 -3.1 ribonuclease D compare
Atu2796 -0.6 -2.6 precorrin-4 C11-methyltransferase compare
Atu0886 -0.6 -1.1 hypothetical protein compare
Atu0276 -0.6 -1.2 hypothetical protein compare
Atu1141 -0.6 -3.3 Phosphoribosylglycinamide synthetase compare
Atu5173 -0.6 -1.5 dehydrogenase compare
Atu3707 -0.6 -1.5 phosphoserine aminotransferase compare
Atu1103 -0.6 -1.9 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2682 -0.6 -2.6 hypothetical protein compare
Atu0726 -0.6 -3.4 ring hydroxylating dioxygenase, alpha-subunit compare
Atu3721 -0.6 -2.1 hypothetical protein compare
Atu5028 -0.6 -2.1 IS426 transposase compare
Atu2267 -0.6 -2.3 hypothetical protein compare
Atu4166 -0.6 -1.2 UDP-glucose 4-epimerase compare
Atu4617 -0.6 -4.5 dTDP-D-glucose-4,6-dehydratase compare
Atu1750 -0.6 -1.9 phosphoribosyl c-AMP cyclohydrolase compare
Atu2001 -0.6 -4.1 excinuclease ABC subunit B compare
Atu2804 -0.6 -4.0 cobaltochelatase subunit compare
Atu4887 -0.6 -1.8 hypothetical protein compare
Atu0240 -0.6 -2.3 hypothetical protein compare
Atu3492 -0.6 -1.8 sugar kinase compare
Atu0353 -0.6 -3.2 acetyltransferase compare
Atu0885 -0.6 -2.0 hypothetical protein compare
Atu1075 -0.6 -3.2 amidophosphoribosyltransferase compare
Atu2555 -0.6 -1.6 L-lysine 2,3-aminomutase compare
Atu3750 -0.6 -1.4 thiamine-phosphate pyrophosphorylase compare
Atu1387 -0.6 -0.9 transcriptional regulator, GntR family compare
Atu6153 -0.6 -1.2 conserved hypothetical protein compare
Atu8190 -0.6 -2.8 hypothetical protein compare
Atu5470 -0.6 -1.7 hypothetical protein compare
Atu4614 -0.6 -3.0 glycosyltransferase compare
Atu0795 -0.6 -1.5 hypothetical protein compare
Atu2808 -0.6 -2.9 cobyric acid synthase compare
Atu3031 -0.6 -1.0 hypothetical protein compare
Atu1005 -0.6 -1.1 hypothetical protein compare
Atu2209 -0.6 -1.5 pyrroline-5-carboxylate reductase compare
Atu1513 -0.6 -2.5 ABC excinuclease subunit A compare
Atu3706 -0.6 -3.5 D-3-phosphoglycerate dehydrogenase compare
Atu4075 -0.6 -3.1 glycogen synthase compare
Atu6098 -0.6 -0.4 transcriptional regulator, HTH family compare
Atu1291 -0.6 -1.2 hypothetical protein compare
Atu8161 -0.6 -1.0 hypothetical protein compare
Atu5057 -0.5 -1.1 hypothetical protein compare
Atu0997 -0.5 -2.2 hypothetical protein compare
Atu1845 -0.5 -1.9 phosphoribosylformylglycinamidine synthase I compare
Atu3666 -0.5 -2.7 hypothetical protein compare
Atu2768 -0.5 -1.8 hypothetical protein compare
Atu0043 -0.5 -1.3 imidazoleglycerol-phosphate dehydratase compare
Atu0973 -0.5 -3.1 cycH protein compare
Atu8023 -0.5 -1.3 hypothetical protein compare
Atu2442 -0.5 -1.2 hypothetical protein compare
Atu0784 -0.5 -1.5 hypothetical protein compare
Atu1739 -0.5 -2.2 permease compare
Atu0755 -0.5 -1.3 hypothetical protein compare
Atu5169 -0.5 -1.5 type IV secretion protein AvhB8 compare
Atu3353 -0.5 -2.9 mannose-1-phosphate guanylyltransferase compare
Atu3475 -0.5 -2.5 acetyl-CoA C-acetyltransferase compare
Atu4792 -0.5 -1.0 hypothetical protein compare
Atu4711 -0.5 -1.6 two component sensor kinase compare
Atu0107 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Hydrogen peroxide in Agrobacterium fabrum C58

For stress Hydrogen peroxide across organisms