Experiment set4IT079 for Pseudomonas simiae WCS417

Compare to:

LB with Bacitracin 1 mg/ml

200 most important genes:

  gene name fitness t score description  
PS417_05975 -3.2 -2.7 chemotaxis protein CheW compare
PS417_24155 -3.2 -4.3 ATP-binding protein compare
PS417_23770 -3.1 -2.1 exodeoxyribonuclease V subunit alpha compare
PS417_27795 -2.8 -2.0 orotate phosphoribosyltransferase compare
PS417_02210 -2.2 -13.2 diguanylate cyclase compare
PS417_23950 -1.8 -5.5 polynucleotide phosphorylase/polyadenylase compare
PS417_05815 -1.6 -6.4 recombinase RecA compare
PS417_02280 -1.5 -3.2 GlcNAc-PI de-N-acetylase compare
PS417_19675 -1.5 -5.6 chemotaxis protein CheY compare
PS417_05985 -1.4 -3.5 chemotaxis protein CheY compare
PS417_03260 -1.3 -3.4 5S ribosomal RNA compare
PS417_27800 -1.3 -6.7 exodeoxyribonuclease III compare
PS417_23995 -1.3 -1.3 preprotein translocase subunit SecG compare
PS417_19350 -1.3 -4.4 GTP cyclohydrolase compare
PS417_21630 -1.2 -3.8 magnesium transporter compare
PS417_23915 -1.2 -2.4 pantoate--beta-alanine ligase compare
PS417_06145 -1.2 -1.4 hypothetical protein compare
PS417_18105 -1.2 -1.6 iron-dicitrate transporter substrate-binding subunit compare
PS417_27865 -1.1 -2.8 LysR family transcriptional regulator compare
PS417_18455 -1.1 -3.1 hypothetical protein compare
PS417_08410 -1.1 -2.3 hypothetical protein compare
PS417_27195 -1.1 -1.6 N-acetylglutamate synthase compare
PS417_02975 -1.1 -5.5 3-dehydroquinate dehydratase compare
PS417_08125 -1.1 -1.2 prephenate dehydratase compare
PS417_09245 -1.0 -1.9 recombinase RdgC compare
PS417_21480 -1.0 -1.7 23S rRNA pseudouridylate synthase compare
PS417_07470 -1.0 -1.5 hypothetical protein compare
PS417_22445 -1.0 -3.6 ATP-dependent DNA helicase RuvB compare
PS417_24835 -1.0 -4.3 hypothetical protein compare
PS417_13445 -1.0 -1.6 D-aminopeptidase compare
PS417_26695 -1.0 -1.4 uracil phosphoribosyltransferase compare
PS417_26370 -1.0 -4.2 RNA helicase compare
PS417_10305 -1.0 -2.8 hypothetical protein compare
PS417_27870 -1.0 -3.2 ATP-dependent DNA helicase RecG compare
PS417_24370 -0.9 -1.0 (2Fe-2S)-binding protein compare
PS417_15085 -0.9 -4.0 ATPase AAA compare
PS417_00755 -0.9 -1.0 biofilm PGA synthesis protein PgaD compare
PS417_06375 -0.9 -0.9 deoxycytidine triphosphate deaminase compare
PS417_06620 -0.9 -2.4 hypothetical protein compare
PS417_27135 -0.9 -1.0 glutamine synthetase compare
PS417_10040 -0.9 -1.3 MFS transporter compare
PS417_04365 -0.9 -1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
PS417_24500 -0.9 -3.4 DEAD/DEAH box helicase compare
PS417_15540 -0.9 -1.5 NUDIX hydrolase compare
PS417_22565 -0.9 -1.2 formyltetrahydrofolate deformylase compare
PS417_00345 -0.8 -2.4 copper-binding protein compare
PS417_08135 -0.8 -3.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_02555 -0.8 -7.1 exoribonuclease R compare
PS417_08730 -0.8 -1.7 cytochrome C compare
PS417_26985 -0.8 -4.6 phosphoenolpyruvate-protein phosphotransferase compare
PS417_27705 -0.8 -1.7 amino acid dehydrogenase compare
PS417_25225 -0.8 -2.6 MFS transporter compare
PS417_08220 -0.8 -0.9 epimerase compare
PS417_02225 -0.8 -1.8 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase compare
PS417_12660 -0.8 -1.7 hypothetical protein compare
PS417_08090 -0.8 -1.2 3-oxoacyl-ACP reductase compare
PS417_19520 -0.8 -2.1 transcriptional regulator compare
PS417_20140 -0.8 -2.1 nucleoprotein/polynucleotide-associated enzyme compare
PS417_05165 -0.8 -1.9 cytosol aminopeptidase compare
PS417_04650 -0.8 -1.2 D-alanine--D-alanine ligase compare
PS417_06945 -0.7 -0.8 membrane protein compare
PS417_15875 -0.7 -1.4 LuxR family transcriptional regulator compare
PS417_10275 -0.7 -2.3 histidine kinase compare
PS417_04090 -0.7 -3.1 hypothetical protein compare
PS417_14925 -0.7 -1.9 2-methylcitrate dehydratase compare
PS417_04340 -0.7 -3.5 ribosome hibernation promoting factor HPF compare
PS417_19275 -0.7 -1.2 hypothetical protein compare
PS417_13195 -0.7 -2.2 RND transporter MFP subunit compare
PS417_19625 -0.7 -1.7 histidine kinase compare
PS417_21845 -0.7 -1.6 membrane protein compare
PS417_08580 -0.7 -2.8 histidine kinase compare
PS417_18570 -0.7 -2.3 peptidoglycan-binding protein compare
PS417_03930 -0.7 -4.3 thymidine phosphorylase compare
PS417_25270 -0.7 -2.3 NrdR family transcriptional regulator compare
PS417_08575 -0.7 -1.8 MarR family transcriptional regulator compare
PS417_12990 -0.7 -2.4 nucleoside hydrolase compare
PS417_06825 -0.7 -1.2 hypothetical protein compare
PS417_27245 -0.7 -2.9 aminotransferase DegT compare
PS417_02560 -0.6 -1.6 23S rRNA methyltransferase compare
PS417_14710 -0.6 -1.2 isochorismatase compare
PS417_20855 -0.6 -1.4 hypothetical protein compare
PS417_23005 -0.6 -3.7 XRE family transcriptional regulator compare
PS417_17240 -0.6 -2.6 trigger factor compare
PS417_22190 -0.6 -4.1 diguanylate cyclase compare
PS417_23900 -0.6 -4.7 poly(A) polymerase compare
PS417_05830 -0.6 -1.9 hypothetical protein compare
PS417_18420 -0.6 -2.4 deoxyribonuclease compare
PS417_22205 -0.6 -4.3 potassium transporter TrkH compare
PS417_00185 -0.6 -2.2 tryptophan synthase subunit beta compare
PS417_18205 -0.6 -0.9 aldehyde dehydrogenase compare
PS417_04280 -0.6 -2.6 carbon-nitrogen hydrolase compare
PS417_16750 -0.6 -1.9 ABC transporter ATP-binding protein compare
PS417_05040 -0.6 -2.5 amino acid dehydrogenase compare
PS417_19425 -0.6 -0.8 allantoicase compare
PS417_03875 -0.6 -1.9 membrane protein compare
PS417_06680 -0.6 -3.6 nuclease PIN compare
PS417_10425 -0.6 -1.3 hypothetical protein compare
PS417_00080 -0.6 -3.8 potassium transporter peripheral membrane component compare
PS417_23210 -0.6 -1.5 serine acetyltransferase compare
PS417_28355 -0.6 -2.3 cardiolipin synthetase compare
PS417_19955 -0.6 -1.3 hypothetical protein compare
PS417_17110 -0.6 -2.6 spore coat protein compare
PS417_02880 -0.6 -1.0 copper chaperone compare
PS417_02485 -0.6 -3.1 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_07245 -0.6 -1.7 2-deoxy-D-ribonate 3-dehydrogenase (from data) compare
PS417_08855 -0.6 -2.5 glycine/betaine ABC transporter substrate-binding protein compare
PS417_19975 -0.6 -1.5 hypothetical protein compare
PS417_19145 -0.6 -4.1 membrane protein compare
PS417_00660 -0.6 -1.6 DSBA oxidoreductase compare
PS417_08045 -0.6 -1.5 uracil permease compare
PS417_19655 -0.5 -2.6 chemotaxis protein CheW compare
PS417_14805 -0.5 -1.2 AraC family transcriptional regulator compare
PS417_15440 -0.5 -2.0 iron ABC transporter substrate-binding protein compare
PS417_13425 -0.5 -0.7 cupin compare
PS417_18775 -0.5 -1.6 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
PS417_14935 -0.5 -1.5 transposase compare
PS417_26470 -0.5 -1.5 cytochrome C compare
PS417_17595 -0.5 -2.3 amino acid ABC transporter permease compare
PS417_21680 -0.5 -2.1 succinylglutamate desuccinylase compare
PS417_17795 -0.5 -0.7 ABC transporter permease compare
PS417_21915 -0.5 -1.9 LysR family transcriptional regulator compare
PS417_10060 -0.5 -0.9 hypothetical protein compare
PS417_16680 -0.5 -1.0 MFS transporter compare
PS417_17000 -0.5 -1.6 MerR family transcriptional regulator compare
PS417_19360 -0.5 -2.0 hypothetical protein compare
PS417_18920 -0.5 -2.4 hypothetical protein compare
PS417_20705 -0.5 -2.1 cbb3-type cytochrome c oxidase subunit II compare
PS417_05860 -0.5 -1.3 hypothetical protein compare
PS417_02415 -0.5 -2.6 phosphoserine phosphatase compare
PS417_21015 -0.5 -0.8 EstX protein compare
PS417_16275 -0.5 -1.5 hypothetical protein compare
PS417_12520 -0.5 -1.1 hypothetical protein compare
PS417_07190 -0.5 -2.2 MFS transporter compare
PS417_23485 -0.5 -2.4 antibiotic biosynthesis monooxygenase compare
PS417_08680 -0.5 -1.0 flagellar biosynthesis protein FlhB compare
PS417_14515 -0.5 -1.2 acetylglucosaminylphosphatidylinositol deacetylase compare
PS417_21345 -0.5 -1.8 GNAT family acetyltransferase compare
PS417_20785 -0.5 -2.1 transcriptional regulator compare
PS417_12735 -0.5 -1.1 peroxidase compare
PS417_22270 -0.5 -1.8 hypothetical protein compare
PS417_19800 -0.5 -1.3 flagellar motor switch protein FliG compare
PS417_24765 -0.5 -2.0 membrane protein compare
PS417_06845 -0.5 -0.9 lipoprotein compare
PS417_07095 -0.5 -2.8 histidine kinase compare
PS417_24135 -0.5 -0.8 hypothetical protein compare
PS417_13755 -0.5 -1.3 oxidoreductase compare
PS417_26990 -0.5 -0.5 RNA pyrophosphohydrolase compare
PS417_23455 -0.5 -1.8 LrgA compare
PS417_23600 -0.5 -2.6 RpiR family transcriptional regulator compare
PS417_06465 -0.5 -2.2 transcriptional regulator compare
PS417_01605 -0.5 -0.8 phosphoglycerate mutase compare
PS417_12505 -0.5 -1.9 peptidase compare
PS417_17215 -0.5 -1.7 peptidylprolyl isomerase compare
PS417_16490 -0.5 -1.0 cell division protein FtsK compare
PS417_14395 -0.5 -1.5 fe2+ zn2+ uptake regulation protein compare
PS417_19190 -0.5 -1.6 BolA family transcriptional regulator compare
PS417_01915 -0.5 -0.7 ATP-dependent protease ATP-binding subunit HslU compare
PS417_07270 -0.5 -2.0 LysR family transcriptional regulator compare
PS417_02865 -0.5 -1.7 peptidase compare
PS417_01005 -0.5 -1.2 methionine ABC transporter substrate-binding protein compare
PS417_23545 -0.5 -1.4 gamma-glutamyl kinase compare
PS417_05840 -0.5 -1.4 LuxR family transcriptional regulator compare
PS417_15470 -0.5 -2.0 saccharopine dehydrogenase compare
PS417_19660 -0.5 -3.6 cobalamin biosynthesis protein CobQ compare
PS417_17945 -0.5 -0.7 hypothetical protein compare
PS417_13650 -0.5 -2.2 LacI family transcriptional regulator compare
PS417_26520 -0.5 -1.8 amino acid ABC transporter substrate-binding protein compare
PS417_17585 -0.4 -1.3 ornithine cyclodeaminase compare
PS417_21655 -0.4 -0.7 aspartate kinase compare
PS417_15200 -0.4 -1.8 protein activator of alkane oxidation PraB compare
PS417_12565 -0.4 -1.0 2-dehydro-3-deoxygluconokinase compare
PS417_17320 -0.4 -1.2 phenylhydantoinase compare
PS417_17565 -0.4 -0.9 branched-chain amino acid aminotransferase compare
PS417_12110 -0.4 -1.1 ATP-binding protein compare
PS417_20585 -0.4 -1.8 chemotaxis protein compare
PS417_04270 -0.4 -2.6 ribonuclease G compare
PS417_08230 -0.4 -1.1 lipopolysaccharide biosynthesis protein RfbH compare
PS417_23135 -0.4 -0.6 GTP-binding protein compare
PS417_23390 -0.4 -2.4 ubiquinol oxidase subunit II compare
PS417_21210 -0.4 -0.9 amidotransferase compare
PS417_25765 -0.4 -0.7 transcriptional regulator compare
PS417_05010 -0.4 -1.2 IclR family transcriptional regulator compare
PS417_23490 -0.4 -0.7 dihydrofolate reductase compare
PS417_13870 -0.4 -1.5 hypothetical protein compare
PS417_04705 -0.4 -1.3 hypothetical protein compare
PS417_17305 -0.4 -0.7 hypothetical protein compare
PS417_10910 -0.4 -1.8 FAD-dependent oxidoreductase compare
PS417_07950 -0.4 -1.9 MFS transporter compare
PS417_05160 -0.4 -0.8 DNA polymerase III subunit chi compare
PS417_14260 -0.4 -1.5 phosphate ABC transporter permease compare
PS417_11865 -0.4 -1.0 xylose isomerase compare
PS417_20835 -0.4 -2.1 LysR family transcriptional regulator compare
PS417_10265 -0.4 -1.1 peptidase compare
PS417_07945 -0.4 -1.1 hypothetical protein compare
PS417_23775 -0.4 -0.4 exodeoxyribonuclease V subunit beta compare
PS417_11060 -0.4 -1.7 transporter compare
PS417_07210 -0.4 -2.9 allantoate amidohydrolase compare
PS417_12750 -0.4 -1.9 acriflavine resistance protein B compare
PS417_04585 -0.4 -0.7 hypothetical protein compare
PS417_24710 -0.4 -2.5 lipoprotein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Bacitracin in Pseudomonas simiae WCS417

For stress Bacitracin across organisms