Experiment set4IT079 for Agrobacterium fabrum C58

Compare to:

R2A with Ticarcillin disodium salt 0.01 mM

200 most important genes:

  gene name fitness t score description  
Atu0972 -6.2 -8.5 lipA protein compare
Atu2710 -5.5 -11.8 hypothetical protein compare
Atu0086 -3.0 -1.6 ribosome-binding factor A compare
Atu0434 -2.4 -2.3 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1163 -2.3 -3.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1030 -2.3 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3469 -2.3 -3.1 phosphoglyceromutase compare
Atu0769 -2.3 -2.1 protoheme IX farnesyltransferase compare
Atu1644 -2.1 -5.2 hypothetical protein compare
Atu1307 -2.1 -7.6 dihydroorotase compare
Atu0017 -2.0 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0184 -2.0 -2.4 glucokinase compare
Atu1647 -1.9 -8.4 ABC transporter, membrane spanning protein compare
Atu0039 -1.9 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0399 -1.9 -5.0 dihydroorotase compare
Atu2692 -1.9 -3.2 intracellular septation protein compare
Atu0346 -1.8 -4.0 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0400 -1.8 -5.0 orotate phosphoribosyltransferase compare
Atu3754 -1.8 -6.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1021 -1.7 -2.9 outer membrane protein compare
Atu0298 -1.7 -4.5 orotidine 5 compare
Atu1446 -1.7 -3.0 two component response regulator compare
Atu1646 -1.7 -7.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu1688 -1.7 -4.2 indole-3-glycerol-phosphate synthase compare
Atu3598 -1.7 -2.3 thiol:disulfide interchange protein compare
Atu3353 -1.6 -8.4 mannose-1-phosphate guanylyltransferase compare
Atu1645 -1.6 -7.3 ABC transporter, substrate binding protein compare
Atu1373 -1.6 -8.4 hypothetical protein compare
Atu1131 -1.6 -5.9 outer membrane protein compare
Atu4614 -1.6 -9.1 glycosyltransferase compare
Atu0486 -1.5 -5.1 dihydroorotate dehydrogenase compare
Atu1354 -1.5 -1.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu4613 -1.5 -8.7 glycosyltransferase compare
Atu4615 -1.4 -7.5 glucose-1-phosphate thymidylyltransferase compare
Atu0845 -1.4 -4.7 hypothetical protein compare
Atu2289 -1.4 -7.6 anthranilate synthase component I and II compare
Atu1687 -1.4 -4.8 anthranilate phosphoribosyltransferase compare
Atu0029 -1.4 -4.5 S-adenosylhomocysteine hydrolase compare
Atu1141 -1.4 -5.2 Phosphoribosylglycinamide synthetase compare
Atu0723 -1.4 -2.1 FAD dependent oxidoreductase compare
Atu4072 -1.4 -2.7 nodulation protein N compare
Atu0598 -1.3 -7.6 phosphogluconate dehydratase compare
Atu3755 -1.3 -4.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1844 -1.3 -3.4 Phosphoribosylformylglycinamidine synthetase compare
Atu0115 -1.3 -1.2 hypothetical protein compare
Atu2809 -1.2 -5.1 cobalamin biosynthesis protein compare
Atu0647 -1.2 -4.2 phosphoribosylamine--glycine ligase compare
Atu2183 -1.2 -4.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu3763 -1.2 -2.5 hypothetical protein compare
Atu1075 -1.2 -5.4 amidophosphoribosyltransferase compare
Atu1845 -1.2 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu1351 -1.2 -5.6 hypothetical protein compare
Atu1308 -1.2 -4.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1685 -1.2 -1.1 hypothetical protein compare
Atu0421 -1.2 -1.6 ABC transporter, membrane spanning protein compare
Atu0189 -1.2 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0103 -1.1 -7.1 penicillin-binding protein compare
Atu3518 -1.1 -7.0 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu4618 -1.1 -7.3 dTDP-rhamnose-3,5-epimerase compare
Atu3311 -1.1 -8.4 phosphomannose isomerase compare
Atu0043 -1.1 -1.7 imidazoleglycerol-phosphate dehydratase compare
Atu0756 -1.1 -4.4 phosphoglycerate mutase compare
Atu1140 -1.1 -4.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4617 -1.1 -7.7 dTDP-D-glucose-4,6-dehydratase compare
Atu1686 -1.1 -6.4 peptidyl-prolyl cis-trans isomerse D compare
Atu0225 -1.0 -1.1 hypothetical protein compare
Atu0566 -1.0 -2.0 hypothetical protein compare
Atu0836 -1.0 -3.1 Glutathione-S-transferase compare
Atu2379 -1.0 -5.7 phosphomannomutase compare
Atu8052 -1.0 -1.1 hypothetical protein compare
Atu3750 -1.0 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu2113 -1.0 -2.3 N-acetylmuramoyl-L-alanine amidase compare
Atu0188 -1.0 -3.7 ABC transporter, membrane spanning protein (peptide) compare
Atu1110 -1.0 -2.6 cytosol aminopeptidase compare
Atu2800 -1.0 -3.4 precorrin-3B C17-methyltransferase compare
Atu1028 -1.0 -1.9 hypothetical protein compare
Atu0190 -1.0 -5.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2793 -0.9 -3.7 cobyrinic acid a,c-diamide synthase compare
Atu1874 -0.9 -1.3 RecA protein compare
Atu3706 -0.9 -4.3 D-3-phosphoglycerate dehydrogenase compare
Atu0040 -0.9 -1.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1774 -0.9 -4.5 ABC transporter, substrate binding protein (peptide) compare
Atu1588 -0.9 -5.6 homoserine dehydrogenase compare
Atu2592 -0.9 -2.8 hypothetical protein compare
Atu2805 -0.9 -4.1 cobalamin synthesis protein compare
Atu8025 -0.9 -1.5 hypothetical protein compare
Atu4711 -0.9 -3.4 two component sensor kinase compare
Atu8029 -0.9 -1.5 hypothetical protein compare
Atu1754 -0.9 -1.6 hypothetical protein compare
Atu1447 -0.9 -1.5 two component sensor kinase compare
Atu3120 -0.9 -0.9 hypothetical protein compare
Atu3697 -0.9 -2.6 ATP-dependent protease LA 2 compare
Atu1891 -0.9 -2.6 cobalamin biosynthesis protein compare
Atu1219 -0.9 -0.9 hypothetical protein compare
Atu2577 -0.9 -6.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1380 -0.9 -3.4 zinc metallopeptidase compare
Atu0471 -0.9 -1.7 hypothetical protein compare
Atu0107 -0.9 -1.8 hypothetical protein compare
Atu2804 -0.9 -5.5 cobaltochelatase subunit compare
Atu4199 -0.9 -4.1 TetR family transcriptional regulator compare
Atu2802 -0.9 -4.7 precorrin-8X methylmutase compare
Atu1445 -0.9 -3.8 two component sensor kinase compare
Atu3712 -0.8 -1.4 hypothetical protein compare
Atu1225 -0.8 -1.4 hypothetical protein compare
Atu0331 -0.8 -2.6 sigma-54 modulation protein compare
Atu8162 -0.8 -1.3 hypothetical protein compare
Atu0885 -0.8 -2.4 hypothetical protein compare
Atu2590 -0.8 -3.9 hypothetical protein compare
Atu3486 -0.8 -2.3 DeoR family transcriptional regulator compare
Atu2807 -0.8 -3.6 cob(I)alamin adenosyltransferase compare
Atu4166 -0.8 -1.5 UDP-glucose 4-epimerase compare
Atu4873 -0.8 -5.0 TetR family transcriptional regulator compare
Atu1868 -0.8 -3.5 tRNA/rRNA methyltransferase compare
Atu2352 -0.8 -1.8 hypothetical protein compare
Atu2067 -0.8 -1.0 hypothetical protein compare
Atu1542 -0.8 -2.2 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2073 -0.8 -1.9 membrane protein compare
Atu4837 -0.8 -2.1 hypothetical protein compare
Atu4866 -0.8 -2.5 hypothetical protein compare
Atu2548 -0.8 -5.4 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4148 -0.8 -2.8 UDP-glucuronic acid epimerase compare
Atu2504 -0.8 -2.7 transcriptional regulator, GntR family compare
Atu3014 -0.8 -2.1 hypothetical protein compare
Atu0031 -0.7 -1.3 PTS system, IIA component compare
Atu0726 -0.7 -4.7 ring hydroxylating dioxygenase, alpha-subunit compare
Atu1175 -0.7 -1.3 hypothetical protein compare
Atu0332 -0.7 -3.9 RNA polymerase sigma-54 factor compare
Atu0211 -0.7 -4.4 hypothetical protein compare
Atu2205 -0.7 -1.8 transcriptional regulator, MarR family compare
Atu5130 -0.7 -3.3 attachment protein compare
Atu0257 -0.7 -3.6 hypothetical protein compare
Atu1254 -0.7 -1.2 transcriptional regulator, ArsR family compare
Atu3674 -0.7 -2.1 hypothetical protein compare
Atu2808 -0.7 -3.8 cobyric acid synthase compare
Atu3634 -0.7 -2.5 penicillin-binding protein dacf precursor compare
Atu0920 -0.7 -2.5 hypothetical protein compare
Atu2125 -0.7 -1.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1466 -0.7 -1.5 hypothetical protein compare
Atu3018 -0.7 -2.8 hypothetical protein compare
Atu2040 -0.7 -2.5 phosphoserine phosphatase compare
Atu0401 -0.7 -2.3 fructokinase compare
Atu2583 -0.7 -3.7 glycosyltransferase compare
Atu3613 -0.7 -2.6 hypothetical protein compare
Atu8096 -0.7 -1.1 hypothetical protein compare
Atu8167 -0.7 -4.7 putative transmembrane protein compare
Atu0141 -0.7 -0.7 cytochrome O ubiquinol oxidase subunit I compare
Atu2803 -0.7 -1.6 Cobalamin biosynthesis associated protein compare
Atu4896 -0.7 -1.7 acetyltransferase compare
Atu1468 -0.7 -4.1 hypothetical protein compare
Atu0687 -0.7 -0.8 hypothetical protein compare
Atu4108 -0.7 -3.2 ribonuclease D compare
Atu2304 -0.7 -5.0 bacteroid development protein compare
Atu2043 -0.7 -2.5 htrA family protein compare
Atu4317 -0.7 -2.0 TetR family transcriptional regulator compare
Atu3034 -0.7 -2.3 ROK family transcriptional regulator compare
Atu0153 -0.7 -2.1 transcriptional regulator, Fur family compare
Atu0185 -0.7 -2.2 methylglyoxal synthase compare
Atu2193 -0.6 -0.8 hypothetical protein compare
Atu1836 -0.6 -1.5 hypothetical protein compare
Atu2270 -0.6 -1.3 ATP-dependent Clp protease, proteolytic subunit compare
Atu3045 -0.6 -2.6 hypothetical protein compare
Atu0925 -0.6 -1.5 hypothetical protein compare
Atu8180 -0.6 -2.3 hypothetical protein compare
Atu4609 -0.6 -5.1 glycosyltransferase compare
Atu4075 -0.6 -2.5 glycogen synthase compare
Atu0501 -0.6 -4.3 acyl-CoA dehydrogenase compare
Atu3727 -0.6 -1.4 hypothetical protein compare
Atu1850 -0.6 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu0544 -0.6 -1.2 hypothetical protein compare
Atu2798 -0.6 -1.6 precorrin-6y methyltransferase compare
Atu1759 -0.6 -3.7 L-serine dehydratase compare
Atu1444 -0.6 -2.4 nitrogen regulation protein compare
Atu5160 -0.6 -1.4 transcriptional regulator protein compare
Atu2237 -0.6 -2.0 cytochrome c1 compare
Atu3759 -0.6 -1.1 hypothetical protein compare
Atu1619 -0.6 -1.3 protein-export membrane protein SECG compare
Atu2238 -0.6 -2.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1463 -0.6 -1.7 glycine cleavage system component H compare
Atu2028 -0.6 -0.9 transcriptional regulator, ArsR family compare
Atu1149 -0.6 -1.0 adenylate cyclase compare
Atu3707 -0.6 -1.1 phosphoserine aminotransferase compare
Atu4149 -0.6 -3.4 UDP-glucose 6-dehydrogenase compare
Atu4881 -0.6 -3.3 hypothetical protein compare
Atu2204 -0.6 -0.8 hypothetical protein compare
Atu4418 -0.6 -2.7 glutaryl-CoA dehydrogenase compare
Atu4850 -0.6 -3.1 hypothetical protein compare
Atu8019 -0.6 -2.2 hypothetical protein compare
Atu0767 -0.6 -2.7 cytochrome c oxidase subunit II compare
Atu2795 -0.6 -3.0 cobalamin biosynthetic protein compare
Atu4753 -0.6 -1.9 amino acid ABC transporter permease compare
Atu2234 -0.6 -1.5 hypothetical protein compare
Atu8118 -0.6 -2.1 putative universal stress protein compare
Atu2640 -0.6 -1.8 hypothetical protein compare
Atu1023 -0.6 -1.3 hypothetical protein compare
Atu3739 -0.6 -0.8 phosphoglycerate kinase compare
Atu0507 -0.6 -3.2 potassium efflux system protein compare
Atu3496 -0.6 -2.3 hypothetical protein compare
Atu1525 -0.6 -2.4 hypothetical protein compare
Atu3067 -0.6 -2.4 hypothetical protein compare
Atu5061 -0.6 -1.8 glycerophosphoryl diester phosphodiesterase compare


Specific Phenotypes

For 5 genes in this experiment

For stress Ticarcillin disodium salt in Agrobacterium fabrum C58

For stress Ticarcillin disodium salt across organisms