Experiment set4IT075 for Pseudomonas simiae WCS417

Compare to:

LB with Aluminum chloride hydrate 4 mM

200 most important genes:

  gene name fitness t score description  
PS417_22775 -4.9 -11.9 histidine kinase compare
PS417_13820 -4.4 -11.0 UDP-glucose 6-dehydrogenase compare
PS417_14065 -4.4 -13.7 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_13800 -3.9 -4.7 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_21515 -3.8 -17.1 transcriptional regulator compare
PS417_13795 -3.8 -10.5 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_13805 -3.8 -14.1 4-amino-4-deoxy-L-arabinose transferase compare
PS417_05975 -3.6 -2.5 chemotaxis protein CheW compare
PS417_13790 -3.5 -5.1 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_27245 -3.2 -5.3 aminotransferase DegT compare
PS417_24835 -3.0 -7.5 hypothetical protein compare
PS417_23770 -2.9 -2.0 exodeoxyribonuclease V subunit alpha compare
PS417_06375 -2.8 -1.6 deoxycytidine triphosphate deaminase compare
PS417_24155 -2.4 -3.8 ATP-binding protein compare
PS417_17780 -2.3 -2.5 Ais protein compare
PS417_22780 -1.9 -1.6 XRE family transcriptional regulator compare
PS417_27795 -1.9 -1.7 orotate phosphoribosyltransferase compare
PS417_23950 -1.9 -4.9 polynucleotide phosphorylase/polyadenylase compare
PS417_22565 -1.8 -1.9 formyltetrahydrofolate deformylase compare
PS417_21510 -1.7 -2.2 histidine kinase compare
PS417_27800 -1.6 -6.6 exodeoxyribonuclease III compare
PS417_14070 -1.6 -1.1 hypothetical protein compare
PS417_08125 -1.6 -1.5 prephenate dehydratase compare
PS417_08730 -1.6 -2.1 cytochrome C compare
PS417_15540 -1.6 -1.5 NUDIX hydrolase compare
PS417_04275 -1.5 -10.9 hypothetical protein compare
PS417_03260 -1.5 -3.3 5S ribosomal RNA compare
PS417_08090 -1.5 -1.9 3-oxoacyl-ACP reductase compare
PS417_20855 -1.5 -2.4 hypothetical protein compare
PS417_01525 -1.5 -9.4 membrane protein compare
PS417_23775 -1.5 -1.8 exodeoxyribonuclease V subunit beta compare
PS417_21430 -1.4 -2.9 3-oxoacyl-ACP synthase compare
PS417_02555 -1.4 -10.3 exoribonuclease R compare
PS417_14805 -1.4 -2.5 AraC family transcriptional regulator compare
PS417_21125 -1.3 -7.6 phosphoadenosine phosphosulfate reductase compare
PS417_02560 -1.3 -1.8 23S rRNA methyltransferase compare
PS417_06680 -1.3 -7.3 nuclease PIN compare
PS417_21655 -1.3 -1.6 aspartate kinase compare
PS417_13785 -1.3 -2.3 hypothetical protein compare
PS417_18425 -1.2 -0.9 sporulation protein compare
PS417_23995 -1.2 -1.2 preprotein translocase subunit SecG compare
PS417_03550 -1.2 -2.8 hypothetical protein compare
PS417_27195 -1.1 -1.3 N-acetylglutamate synthase compare
PS417_19350 -1.1 -4.5 GTP cyclohydrolase compare
PS417_17610 -1.1 -1.4 AsnC family transcriptional regulator compare
PS417_23375 -1.1 -1.6 cytochrome C oxidase compare
PS417_26370 -1.1 -3.5 RNA helicase compare
PS417_16510 -1.1 -3.0 Clp protease ClpX compare
PS417_21630 -1.1 -2.7 magnesium transporter compare
PS417_27870 -1.1 -2.5 ATP-dependent DNA helicase RecG compare
PS417_05985 -1.0 -2.6 chemotaxis protein CheY compare
PS417_20705 -1.0 -3.0 cbb3-type cytochrome c oxidase subunit II compare
PS417_18105 -1.0 -1.4 iron-dicitrate transporter substrate-binding subunit compare
PS417_01920 -1.0 -1.6 ATP-dependent protease subunit HslV compare
PS417_02720 -1.0 -1.2 TetR family transcriptional regulator compare
PS417_01915 -1.0 -1.2 ATP-dependent protease ATP-binding subunit HslU compare
PS417_23025 -1.0 -3.9 murein transglycosylase compare
PS417_13825 -1.0 -6.4 glycosyltransferase compare
PS417_28225 -1.0 -1.8 hypothetical protein compare
PS417_08335 -1.0 -1.6 hypothetical protein compare
PS417_00660 -0.9 -2.2 DSBA oxidoreductase compare
PS417_02210 -0.9 -5.3 diguanylate cyclase compare
PS417_23380 -0.9 -1.7 cytochrome o ubiquinol oxidase subunit III compare
PS417_05815 -0.9 -3.8 recombinase RecA compare
PS417_08220 -0.9 -1.0 epimerase compare
PS417_20715 -0.9 -3.0 cytochrome Cbb3 compare
PS417_16000 -0.9 -1.2 chemotaxis protein CheY compare
PS417_24500 -0.9 -3.7 DEAD/DEAH box helicase compare
PS417_27135 -0.9 -0.9 glutamine synthetase compare
PS417_21955 -0.9 -3.1 dehydrogenase compare
PS417_26805 -0.9 -1.1 cell division protein FtsE compare
PS417_11705 -0.9 -3.9 cyclic peptide transporter compare
PS417_06540 -0.9 -1.0 membrane protein compare
PS417_09470 -0.9 -1.5 hypothetical protein compare
PS417_21480 -0.9 -1.1 23S rRNA pseudouridylate synthase compare
PS417_02280 -0.9 -1.9 GlcNAc-PI de-N-acetylase compare
PS417_02270 -0.8 -3.4 carbamoyltransferase compare
PS417_02980 -0.8 -1.1 chemotaxis protein compare
PS417_07470 -0.8 -1.2 hypothetical protein compare
PS417_22570 -0.8 -0.8 H-NS histone compare
PS417_26815 -0.8 -1.9 peptidase M16 compare
PS417_20610 -0.8 -1.3 hypothetical protein compare
PS417_23390 -0.8 -2.8 ubiquinol oxidase subunit II compare
PS417_28070 -0.8 -4.1 phosphate ABC transporter ATP-binding protein compare
PS417_17035 -0.8 -1.1 Cro/Cl family transcriptional regulator compare
PS417_23900 -0.8 -4.3 poly(A) polymerase compare
PS417_08170 -0.8 -4.8 capsular biosynthesis protein compare
PS417_14085 -0.8 -2.4 hypothetical protein compare
PS417_10305 -0.8 -2.4 hypothetical protein compare
PS417_08410 -0.8 -2.4 hypothetical protein compare
PS417_08680 -0.8 -2.1 flagellar biosynthesis protein FlhB compare
PS417_01850 -0.8 -3.0 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_12855 -0.8 -2.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_08230 -0.8 -1.4 lipopolysaccharide biosynthesis protein RfbH compare
PS417_27865 -0.8 -2.5 LysR family transcriptional regulator compare
PS417_27675 -0.8 -2.4 xanthine phosphoribosyltransferase compare
PS417_22640 -0.8 -2.3 cytochrome C biogenesis protein CcmE compare
PS417_02365 -0.8 -1.9 hypothetical protein compare
PS417_26420 -0.8 -1.3 hypothetical protein compare
PS417_00590 -0.8 -1.6 5S ribosomal RNA compare
PS417_15875 -0.7 -1.8 LuxR family transcriptional regulator compare
PS417_15085 -0.7 -2.6 ATPase AAA compare
PS417_15705 -0.7 -1.2 nitrate reductase compare
PS417_07455 -0.7 -1.7 glutamine amidotransferase compare
PS417_08205 -0.7 -2.3 acetyltransferase compare
PS417_06530 -0.7 -1.8 membrane protein compare
PS417_20635 -0.7 -0.7 ABC transporter ATP-binding protein compare
PS417_00925 -0.7 -1.0 hypothetical protein compare
PS417_16490 -0.7 -1.6 cell division protein FtsK compare
PS417_23385 -0.7 -3.7 cytochrome o ubiquinol oxidase subunit I compare
PS417_15780 -0.7 -1.7 membrane protein compare
PS417_08135 -0.7 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_18490 -0.7 -1.5 hypothetical protein compare
PS417_01425 -0.7 -1.4 AraC family transcriptional regulator compare
PS417_15750 -0.7 -1.5 protease compare
PS417_22610 -0.7 -3.9 pilus assembly protein PilZ compare
PS417_08200 -0.7 -1.4 hypothetical protein compare
PS417_06075 -0.7 -1.5 hypothetical protein compare
PS417_22445 -0.7 -2.3 ATP-dependent DNA helicase RuvB compare
PS417_26120 -0.7 -1.3 hypothetical protein compare
PS417_14870 -0.7 -2.3 transporter compare
PS417_20985 -0.7 -1.9 porin compare
PS417_17305 -0.7 -1.0 hypothetical protein compare
PS417_00385 -0.6 -0.8 Fur family transcriptional regulator compare
PS417_05500 -0.6 -1.6 2,3-diketo-5-methylthio-1-phosphopentane phosphatase compare
PS417_00065 -0.6 -1.3 3-methyladenine DNA glycosylase compare
PS417_07620 -0.6 -0.9 beta-hexosaminidase compare
PS417_00345 -0.6 -2.2 copper-binding protein compare
PS417_02880 -0.6 -2.4 copper chaperone compare
PS417_01885 -0.6 -2.1 poly(3-hydroxyalkanoate) granule-associated protein PhaF compare
PS417_19605 -0.6 -1.0 hypothetical protein compare
PS417_06455 -0.6 -1.3 Fe(II)-dependent oxygenase compare
PS417_21380 -0.6 -2.0 GntR family transcriptional regulator compare
PS417_12910 -0.6 -2.4 alanine racemase compare
PS417_08580 -0.6 -2.6 histidine kinase compare
PS417_28515 -0.6 -2.3 16S rRNA methyltransferase compare
PS417_11880 -0.6 -2.3 oxidoreductase compare
PS417_03385 -0.6 -0.9 flavin reductase compare
PS417_21425 -0.6 -1.0 4-amino-4-deoxychorismate lyase compare
PS417_02695 -0.6 -1.5 protein hupE compare
PS417_11225 -0.6 -2.5 glyoxalase compare
PS417_14210 -0.6 -1.2 hypothetical protein compare
PS417_09210 -0.6 -0.9 TetR family transcriptional regulator compare
PS417_18400 -0.6 -2.3 D-ribose ABC transporter, ATPase component RbsA (from data) compare
PS417_05535 -0.6 -1.0 Fis family transcriptional regulator compare
PS417_04290 -0.6 -2.7 hypothetical protein compare
PS417_04220 -0.6 -1.0 4-carboxymuconolactone decarboxylase compare
PS417_01030 -0.6 -0.9 glutamine ABC transporter substrate-binding protein compare
PS417_16775 -0.6 -1.4 branched-chain amino acid ABC transporter ATP-binding protein compare
PS417_12245 -0.6 -1.1 GNAT family acetyltransferase compare
PS417_17560 -0.6 -1.6 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (from data) compare
PS417_07875 -0.6 -0.7 hypothetical protein compare
PS417_27940 -0.6 -1.4 type VI secretion protein compare
PS417_02805 -0.6 -1.3 urease subunit gamma compare
PS417_14600 -0.6 -1.6 bleomycin resistance protein compare
PS417_13780 -0.6 -2.0 integrase compare
PS417_07155 -0.6 -2.7 peroxiredoxin compare
PS417_17215 -0.6 -1.6 peptidylprolyl isomerase compare
PS417_23370 -0.6 -2.5 protoheme IX farnesyltransferase compare
PS417_07945 -0.6 -1.2 hypothetical protein compare
PS417_09695 -0.6 -1.1 hydrolase compare
PS417_15035 -0.6 -1.1 alkylhydroperoxidase compare
PS417_08685 -0.6 -1.0 flagellar hook-length control protein FliK compare
PS417_09430 -0.6 -2.6 alpha/beta hydrolase compare
PS417_16715 -0.6 -1.0 DoxX family protein compare
PS417_26645 -0.6 -1.7 chemotaxis protein compare
PS417_05510 -0.5 -2.9 alpha/beta hydrolase compare
PS417_14075 -0.5 -0.7 hypothetical protein compare
PS417_01565 -0.5 -2.5 imidazole glycerol phosphate synthase compare
PS417_02975 -0.5 -2.5 3-dehydroquinate dehydratase compare
PS417_27945 -0.5 -1.1 type VI secretion protein ImpA compare
PS417_26695 -0.5 -0.8 uracil phosphoribosyltransferase compare
PS417_09625 -0.5 -1.3 sugar ABC transporter substrate-binding protein compare
PS417_15090 -0.5 -1.1 hypothetical protein compare
PS417_27445 -0.5 -3.4 membrane protein compare
PS417_22840 -0.5 -1.4 tRNA-Met compare
PS417_20775 -0.5 -2.2 coproporphyrinogen III oxidase compare
PS417_08950 -0.5 -1.7 DeoR faimly transcriptional regulator compare
PS417_00185 -0.5 -1.3 tryptophan synthase subunit beta compare
PS417_21710 -0.5 -1.4 Succinylornithine transaminase (EC 2.6.1.81) (from data) compare
PS417_12915 -0.5 -1.9 DNA-binding protein compare
PS417_12650 -0.5 -0.9 magnesium transporter compare
PS417_08365 -0.5 -0.6 hypothetical protein compare
PS417_21760 -0.5 -1.1 hypothetical protein compare
PS417_13665 -0.5 -2.7 multidrug DMT transporter permease compare
PS417_20645 -0.5 -3.7 membrane protein compare
PS417_21255 -0.5 -1.7 hypothetical protein compare
PS417_25220 -0.5 -1.5 iron-hydroxamate ABC transporter substrate-binding protein compare
PS417_28050 -0.5 -1.7 hypothetical protein compare
PS417_20650 -0.5 -2.9 hypothetical protein compare
PS417_16515 -0.5 -1.1 Clp protease ClpS compare
PS417_16825 -0.5 -1.3 membrane protein compare
PS417_02485 -0.5 -1.8 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_28080 -0.5 -3.5 phosphate ABC transporter permease compare
PS417_07885 -0.5 -2.5 hypothetical protein compare
PS417_26240 -0.5 -1.1 N-methylproline demethylase compare
PS417_15655 -0.5 -1.8 hypothetical protein compare
PS417_19945 -0.5 -1.8 MarR family transcriptional regulator compare
PS417_23810 -0.5 -3.5 acetolactate synthase 3 catalytic subunit compare
PS417_25390 -0.5 -2.0 MFS transporter compare


Specific Phenotypes

For 1 genes in this experiment

For stress Aluminum chloride hydrate in Pseudomonas simiae WCS417

For stress Aluminum chloride hydrate across organisms