Experiment set4IT074 for Agrobacterium fabrum C58

Compare to:

R2A with Novobiocin sodium salt 0.002 mM

200 most detrimental genes:

  gene name fitness t score description  
Atu3201 +1.6 10.2 TetR family transcriptional regulator compare
Atu3609 +1.4 6.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu2017 +1.2 2.0 hypothetical protein compare
Atu4477 +1.1 5.8 TetR family transcriptional regulator compare
Atu3663 +1.1 2.2 hypothetical protein compare
Atu6165 +0.9 1.0 hypothetical protein compare
Atu0502 +0.9 4.1 acetyl-CoA acetyltransferase compare
Atu2549 +0.8 3.5 transcriptional regulator, TetR family compare
Atu8052 +0.8 1.6 hypothetical protein compare
Atu0355 +0.8 4.3 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu1099 +0.8 4.9 hypothetical protein compare
Atu5057 +0.8 1.6 hypothetical protein compare
Atu3218 +0.8 1.4 hypothetical protein compare
Atu2125 +0.8 1.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3603 +0.7 2.5 two component response regulator compare
Atu8096 +0.7 1.5 hypothetical protein compare
Atu1818 +0.7 1.9 hypothetical protein compare
Atu5475 +0.7 2.3 hypothetical protein compare
Atu8191 +0.7 2.2 hypothetical protein compare
Atu0546 +0.7 4.0 flagellar biosynthetic protein compare
Atu0105 +0.7 2.4 hypothetical protein compare
Atu2235 +0.7 1.9 hypothetical protein compare
Atu0976 +0.7 0.8 cycL protein compare
Atu4724 +0.7 1.2 hypothetical protein compare
Atu8018 +0.7 0.8 hypothetical protein compare
Atu1358 +0.6 1.9 hypothetical protein compare
Atu0836 +0.6 1.8 Glutathione-S-transferase compare
Atu0503 +0.6 4.8 enoyl-CoA hydratase compare
Atu3467 +0.6 2.3 hypothetical protein compare
Atu0912 +0.6 1.1 Na+/H+ antiporter compare
Atu0573 +0.6 3.5 transcriptional regulator compare
Atu2441 +0.6 1.2 RNA methylase compare
Atu8120 +0.6 1.6 hypothetical protein compare
Atu1570 +0.6 1.0 hypothetical protein compare
Atu3873 +0.6 2.8 hypothetical protein compare
Atu2456 +0.6 2.9 lactoylglutathione lyase compare
Atu1475 +0.6 1.3 hypothetical protein compare
Atu4543 +0.6 2.7 LysR family transcriptional regulator compare
Atu1461 +0.6 2.6 hypothetical protein compare
Atu0545 +0.6 4.1 flagella associated protein compare
Atu5489 +0.6 1.2 hypothetical protein compare
Atu0551 +0.6 3.4 flagellar protein FLGA precursor compare
Atu8132 +0.6 3.1 hypothetical protein compare
Atu3759 +0.5 1.2 hypothetical protein compare
Atu6028 +0.5 2.4 ABC transporter, nucleotide binding/ATPase protein (nopaline) compare
Atu6009 +0.5 2.2 indole-3-lactate synthase compare
Atu2617 +0.5 1.2 chemotaxis protein compare
Atu0636 +0.5 3.1 hypothetical protein compare
Atu0550 +0.5 4.1 flagellar P-ring protein precursor compare
Atu1967 +0.5 1.8 hypothetical protein compare
Atu5095 +0.5 2.5 hypothetical protein compare
Atu1895 +0.5 2.3 3, 4-dihydroxy-2-butanone 4-phosphate synthase compare
Atu5451 +0.5 0.7 hypothetical protein compare
Atu4540 +0.5 1.4 protocatechuate 3,4-dioxygenase subunit beta compare
Atu0225 +0.5 0.8 hypothetical protein compare
Atu0201 +0.5 1.4 hypothetical protein compare
Atu5163 +0.5 1.1 type IV secretion protein AvhB2 compare
Atu8032 +0.5 1.6 hypothetical protein compare
Atu0501 +0.5 3.5 acyl-CoA dehydrogenase compare
Atu2091 +0.5 2.0 GGDEF family protein compare
Atu4410 +0.5 1.7 periplasmic nitrate reductase, cytochrome c-type protein compare
Atu1810 +0.5 0.7 hypothetical protein compare
Atu8046 +0.5 1.3 hypothetical protein compare
Atu1724 +0.5 1.5 hypothetical protein compare
Atu2335 +0.5 1.4 hypothetical protein compare
Atu8054 +0.5 0.4 hypothetical protein compare
Atu2055 +0.5 2.5 HlyD family secretion protein compare
Atu4290 +0.5 1.6 hypothetical protein compare
Atu2234 +0.5 1.5 hypothetical protein compare
Atu1223 +0.5 0.9 hypothetical protein compare
Atu4472 +0.5 1.5 hypothetical protein compare
Atu2548 +0.5 3.5 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu2633 +0.5 1.2 RhtB family transporter compare
Atu0553 +0.5 3.0 flagellar hook-basal body complex protein compare
Atu0295 +0.5 1.4 hypothetical protein compare
Atu0568 +0.5 2.7 hypothetical protein compare
Atu8117 +0.5 1.6 hypothetical protein compare
Atu8116 +0.5 2.4 hypothetical protein compare
Atu5429 +0.5 1.3 transcriptional regulator compare
Atu3394 +0.5 1.3 iron ABC transporter ATPase compare
Atu0559 +0.5 2.3 hypothetical protein compare
Atu0583 +0.5 2.1 hypothetical protein compare
Atu0498 +0.4 2.3 hypothetical protein compare
Atu1875 +0.4 2.8 carbohydrate kinase compare
Atu0582 +0.4 3.5 flagellar biosynthetic protein FLIR compare
Atu3990 +0.4 2.8 copper tolerance protein compare
Atu2239 +0.4 1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4469 +0.4 1.9 iron ABC transporter permease compare
Atu8034 +0.4 1.2 hypothetical protein compare
Atu4707 +0.4 2.4 NADH ubiquinone oxidoreductase chain F compare
Atu0809 +0.4 1.1 hypothetical protein compare
Atu1857 +0.4 2.1 inositol monophosphatase family protein compare
Atu3833 +0.4 1.6 hypothetical protein compare
Atu0557 +0.4 3.2 flagellum-specific ATP synthase compare
Atu5468 +0.4 0.7 hypothetical protein compare
Atu8200 +0.4 1.7 hypothetical protein compare
Atu2481 +0.4 2.7 lipase esterase compare
Atu4454 +0.4 1.8 RpiR family transcriptional regulator compare
Atu8040 +0.4 2.2 hypothetical protein compare
Atu0552 +0.4 2.4 flagellar basal-body rod protein compare
Atu1421 +0.4 1.8 hypothetical protein compare
Atu0657 +0.4 2.3 hypothetical protein compare
Atu1083 +0.4 1.6 hypothetical protein compare
Atu2258 +0.4 1.4 acetyltransferase compare
Atu1636 +0.4 1.8 hypothetical protein compare
Atu1032 +0.4 1.3 hypothetical protein compare
Atu2406 +0.4 0.8 hypothetical protein compare
Atu8029 +0.4 0.9 hypothetical protein compare
Atu8162 +0.4 0.8 hypothetical protein compare
Atu1325 +0.4 1.6 acetyltransferase compare
Atu5517 +0.4 1.1 hypothetical protein compare
Atu5130 +0.4 1.2 attachment protein compare
Atu4189 +0.4 2.2 dihydropicolinate synthase compare
Atu1970 +0.4 0.9 hypothetical protein compare
Atu4549 +0.4 2.5 beta-ketoadipyl CoA thiolase compare
Atu0882 +0.4 1.8 hypothetical protein compare
Atu3926 +0.4 0.9 translation initiation inhibitor compare
Atu8112 +0.4 2.4 hypothetical protein compare
Atu0785 +0.4 1.5 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu4061 +0.4 1.3 exopolysaccharide production repressor protein compare
Atu0340 +0.4 1.1 SAM dependent methyltransferase compare
Atu0581 +0.4 2.8 flagellar biosynthesis protein compare
Atu4117 +0.4 1.3 dipeptide ABC transporter ATPase compare
Atu0107 +0.4 0.6 hypothetical protein compare
Atu3413 +0.4 1.4 AsnC family transcriptional regulator compare
Atu0707 +0.4 1.3 transcriptional regulator, LuxR family compare
Atu1859 +0.4 2.0 glutaminase A compare
Atu1121 +0.4 1.9 lignin degradation protein compare
Atu3167 +0.4 2.7 tagatose 6-phosphate kinase compare
Atu3934 +0.4 2.4 imidazolonepropionase compare
Atu3421 +0.4 1.9 hypothetical protein compare
Atu1435 +0.4 1.9 hypothetical protein compare
Atu5511 +0.4 1.4 hypothetical protein compare
Atu0331 +0.4 0.9 sigma-54 modulation protein compare
Atu3932 +0.4 2.2 hypothetical protein compare
Atu1907 +0.4 2.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu8095 +0.4 1.8 hypothetical protein compare
Atu4176 +0.4 1.9 hypothetical protein compare
Atu3506 +0.4 2.2 hypothetical protein compare
Atu1301 +0.4 1.4 hypothetical protein compare
Atu4027 +0.4 1.5 cytochrome c2 compare
Atu2579 +0.4 2.5 metal dependant beta lactamase protein compare
Atu1449 +0.4 1.6 potassium uptake protein compare
Atu3545 +0.4 1.6 hypothetical protein compare
Atu1830 +0.4 1.3 bacterioferritin comigratory protein compare
Atu0109 +0.4 1.3 transcriptional regulator, MarR family compare
Atu5427 +0.4 1.0 hypothetical protein compare
Atu4675 +0.4 2.2 dihydrodipicolinate synthase compare
Atu0579 +0.4 1.6 hook formation protein compare
Atu2176 +0.4 1.4 hypothetical protein compare
Atu1629 +0.4 0.7 transcriptional regulator, ArsR family compare
Atu4406 +0.4 1.0 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu2270 +0.4 0.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu3159 +0.4 1.9 3-hydroxyisobutyrate dehydrogenase compare
Atu2169 +0.4 1.7 hypothetical protein compare
Atu4449 +0.4 2.0 sorbitol/mannitol ABC transporter permease compare
Atu0862 +0.4 1.7 hypothetical protein compare
Atu1518 +0.4 1.6 transcriptional regulator, Fur family compare
Atu0547 +0.4 1.8 flagellar protein compare
Atu4407 +0.4 1.6 periplasmic nitrate reductase, NapD protein compare
Atu0224 +0.4 1.8 components of type IV pilus, pilin subunit compare
Atu0523 +0.4 2.8 flagellar M-ring protein compare
Atu3155 +0.4 1.5 LysR family transcriptional regulator compare
Atu2123 +0.3 1.6 methylenetetrahydrofolate reductase compare
Atu0300 +0.3 1.9 methyltransferase compare
Atu3345 +0.3 1.0 6-pyruvoyl tetrahydrobiopterin synthase compare
Atu0560 +0.3 2.5 flagellar motor protein compare
Atu4665 +0.3 1.7 alpha-galactosidase compare
Atu2307 +0.3 1.6 monooxygenase compare
Atu2293 +0.3 0.8 hypothetical protein compare
Atu1679 +0.3 0.7 peptidyl prolyl cis-trans isomerase compare
Atu0276 +0.3 1.0 hypothetical protein compare
Atu4779 +0.3 1.1 hypothetical protein compare
Atu1952 +0.3 0.5 hypothetical protein compare
Atu5430 +0.3 0.4 hypothetical protein compare
Atu4723 +0.3 1.9 ABC transporter permease compare
Atu1880 +0.3 0.9 ABC transporter, membrane spanning protein (amino acid) compare
Atu0795 +0.3 0.9 hypothetical protein compare
Atu4747 +0.3 1.6 sugar ABC transporter permease compare
Atu4696 +0.3 2.3 oligopeptide ABC transporter permease compare
Atu0578 +0.3 1.2 FlbT post-transcriptional regulator of flagellin compare
Atu0923 +0.3 1.6 hypothetical protein compare
Atu0569 +0.3 2.5 flagellar motor protein, PAL/OmpA family compare
Atu0861 +0.3 1.0 hypothetical protein compare
Atu0570 +0.3 2.7 Chemotaxis protein compare
Atu3270 +0.3 1.4 hypothetical protein compare
Atu4391 +0.3 1.3 nitric oxide reductase NorE protein compare
Atu0480 +0.3 2.3 polysaccharide biosynthesis protein compare
Atu3517 +0.3 1.8 acetyltransferase compare
Atu4671 +0.3 0.9 response regulator compare
Atu2562 +0.3 1.6 ABC transporter, membrane spanning protein (molybdate) compare
Atu1369 +0.3 0.8 HIT family protein compare
Atu3933 +0.3 2.4 histidine ammonia-lyase compare
Atu0303 +0.3 1.3 hypothetical protein compare
Atu0653 +0.3 2.8 hypothetical protein compare
Atu3647 +0.3 1.1 hypothetical protein compare
Atu4644 +0.3 1.9 AraC family transcriptional regulator compare
Atu2832 +0.3 1.5 tRNA modification GTPase compare
Atu3961 +0.3 1.7 GntR family transcriptional regulator compare
Atu0564 +0.3 2.6 flagellar biosynthetic protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Novobiocin sodium salt in Agrobacterium fabrum C58

For stress Novobiocin sodium salt across organisms