Experiment set4IT072 for Agrobacterium fabrum C58

Compare to:

R2A with Nitrofurantoin 0.4 mg/mL

200 most important genes:

  gene name fitness t score description  
Atu2590 -5.3 -6.3 hypothetical protein compare
Atu4149 -5.2 -7.9 UDP-glucose 6-dehydrogenase compare
Atu2577 -5.1 -19.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2584 -4.6 -4.5 hypothetical protein compare
Atu0073 -4.6 -6.7 recF-like protein conserved
Atu2083 -4.5 -3.8 DNA repair protein RecN compare
Atu1077 -4.5 -3.1 DNA repair protein compare
Atu2591 -4.5 -5.3 glucosyltransferase compare
Atu0269 -4.4 -5.2 exodeoxyribonuclease VII large subunit compare
Atu1030 -4.1 -3.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2583 -4.0 -7.7 glycosyltransferase compare
Atu2480 -3.9 -9.8 transcriptional regulator, LysR family compare
Atu2582 -3.9 -6.5 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1874 -3.8 -2.6 RecA protein compare
Atu0093 -3.7 -5.1 Recombination protein compare
Atu4773 -3.6 -2.8 two component response regulator compare
Atu2585 -3.4 -2.4 hypothetical protein compare
Atu1129 -3.2 -10.1 excinuclease ABC chain C compare
Atu0017 -3.0 -2.9 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2483 -3.0 -18.6 AcrB/AcrD/AcrF family protein conserved
Atu2057 -3.0 -3.5 DNA helicase II compare
Atu2482 -2.9 -12.4 HlyD family secretion protein compare
Atu0434 -2.8 -2.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2592 -2.8 -4.7 hypothetical protein compare
Atu1039 -2.7 -4.6 DNA repair protein RecO compare
Atu8180 -2.7 -5.6 hypothetical protein compare
Atu4148 -2.7 -5.0 UDP-glucuronic acid epimerase compare
Atu1513 -2.5 -7.2 ABC excinuclease subunit A compare
Atu1359 -2.5 -1.7 dnaK deletion suppressor protein compare
Atu0184 -2.5 -3.9 glucokinase compare
Atu4199 -2.3 -9.9 TetR family transcriptional regulator compare
Atu3469 -2.3 -2.7 phosphoglyceromutase compare
Atu3739 -2.3 -3.6 phosphoglycerate kinase compare
Atu2684 -2.1 -1.7 hypothetical protein compare
Atu2710 -2.1 -9.0 hypothetical protein compare
Atu3634 -2.0 -4.7 penicillin-binding protein dacf precursor compare
Atu0103 -2.0 -8.9 penicillin-binding protein compare
Atu1687 -2.0 -4.4 anthranilate phosphoribosyltransferase compare
Atu0190 -1.8 -8.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4217 -1.8 -2.1 TetR family transcriptional regulator compare
Atu3012 -1.7 -1.9 hypothetical protein compare
Atu2207 -1.7 -5.5 two component sensor kinase compare
Atu0977 -1.6 -5.2 serine protease DO-like protease compare
Atu0598 -1.6 -7.1 phosphogluconate dehydratase compare
Atu3707 -1.5 -2.9 phosphoserine aminotransferase compare
Atu0030 -1.5 -1.8 phosphocarrier protein HPr compare
Atu2802 -1.5 -4.6 precorrin-8X methylmutase compare
Atu1028 -1.5 -3.3 hypothetical protein compare
Atu0972 -1.5 -6.3 lipA protein compare
Atu8138 -1.5 -2.0 hypothetical protein compare
Atu1685 -1.4 -1.2 hypothetical protein compare
Atu5115 -1.4 -1.3 hypothetical protein compare
Atu1308 -1.4 -4.5 aspartate carbamoyl transferase catalytic subunit compare
Atu1307 -1.4 -5.9 dihydroorotase compare
Atu2001 -1.4 -4.2 excinuclease ABC subunit B compare
Atu0039 -1.4 -1.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0189 -1.4 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu4567 -1.3 -5.4 ROK family transcriptional regulator compare
Atu0086 -1.3 -1.3 ribosome-binding factor A compare
Atu0361 -1.3 -2.2 transcriptional regulator compare
Atu1810 -1.2 -1.3 hypothetical protein compare
Atu1774 -1.2 -4.8 ABC transporter, substrate binding protein (peptide) compare
Atu0762 -1.2 -3.4 hypothetical protein compare
Atu4144 -1.1 -1.4 hypothetical protein compare
Atu2289 -1.1 -6.2 anthranilate synthase component I and II compare
Atu3727 -1.1 -2.6 hypothetical protein compare
Atu4108 -1.1 -5.8 ribonuclease D compare
Atu1570 -1.1 -1.2 hypothetical protein compare
Atu1688 -1.1 -3.3 indole-3-glycerol-phosphate synthase compare
Atu1844 -1.1 -2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu3182 -1.1 -1.7 hypothetical protein compare
Atu2805 -1.1 -3.3 cobalamin synthesis protein compare
Atu1542 -1.1 -4.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2808 -1.0 -4.6 cobyric acid synthase compare
Atu0188 -1.0 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu6098 -1.0 -0.8 transcriptional regulator, HTH family compare
Atu4613 -1.0 -7.7 glycosyltransferase compare
Atu1891 -1.0 -2.9 cobalamin biosynthesis protein compare
Atu3353 -1.0 -6.3 mannose-1-phosphate guanylyltransferase compare
Atu2800 -1.0 -2.0 precorrin-3B C17-methyltransferase compare
Atu0115 -1.0 -1.0 hypothetical protein compare
Atu0721 -1.0 -6.3 hypothetical protein compare
Atu2640 -1.0 -3.1 hypothetical protein compare
Atu3008 -1.0 -1.2 hypothetical protein compare
Atu4618 -1.0 -5.5 dTDP-rhamnose-3,5-epimerase compare
Atu4617 -1.0 -6.5 dTDP-D-glucose-4,6-dehydratase compare
Atu0419 -1.0 -2.5 two component sensor kinase compare
Atu0941 -1.0 -0.9 hypothetical protein compare
Atu2796 -1.0 -4.0 precorrin-4 C11-methyltransferase compare
Atu2809 -0.9 -4.3 cobalamin biosynthesis protein compare
Atu4614 -0.9 -4.4 glycosyltransferase compare
Atu3183 -0.9 -0.8 hypothetical protein compare
Atu0346 -0.9 -1.4 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0050 -0.9 -3.7 two component response regulator compare
Atu2125 -0.9 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu2620 -0.9 -1.4 hypothetical protein compare
Atu2113 -0.9 -1.9 N-acetylmuramoyl-L-alanine amidase compare
Atu2832 -0.9 -2.2 tRNA modification GTPase compare
Atu3011 -0.9 -2.1 ArsR family transcriptional regulator compare
Atu3754 -0.9 -2.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0565 -0.9 -3.7 hypothetical protein compare
Atu0031 -0.9 -1.4 PTS system, IIA component compare
Atu1780 -0.9 -5.0 ATP-dependent DNA helicase compare
Atu2648 -0.9 -1.3 hypothetical protein compare
Atu1163 -0.9 -1.6 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2793 -0.9 -3.4 cobyrinic acid a,c-diamide synthase compare
Atu4711 -0.9 -3.4 two component sensor kinase compare
Atu2183 -0.9 -4.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2804 -0.9 -4.8 cobaltochelatase subunit compare
Atu1906 -0.9 -2.3 ABC transporter, membrane spanning protein compare
Atu3014 -0.8 -2.2 hypothetical protein compare
Atu4884 -0.8 -2.6 hypothetical protein compare
Atu4317 -0.8 -2.1 TetR family transcriptional regulator compare
Atu4615 -0.8 -5.6 glucose-1-phosphate thymidylyltransferase compare
Atu2795 -0.8 -3.5 cobalamin biosynthetic protein compare
Atu0723 -0.8 -1.5 FAD dependent oxidoreductase compare
Atu0556 -0.8 -3.2 hypothetical protein compare
Atu3009 -0.8 -1.2 exopolysaccharide production protein compare
Atu3006 -0.8 -3.2 hypothetical protein compare
Atu2799 -0.8 -2.7 precorrin-6x reductase compare
Atu4882 -0.8 -2.3 hypothetical protein compare
Atu2036 -0.8 -5.6 acetolactate synthase III, large subunit compare
Atu2692 -0.8 -2.3 intracellular septation protein compare
Atu3511 -0.8 -2.1 glutaredoxin compare
Atu0298 -0.8 -3.7 orotidine 5 compare
Atu2798 -0.8 -2.8 precorrin-6y methyltransferase compare
Atu0043 -0.8 -1.4 imidazoleglycerol-phosphate dehydratase compare
Atu3496 -0.8 -1.9 hypothetical protein compare
Atu8118 -0.8 -3.3 putative universal stress protein compare
Atu0920 -0.8 -2.4 hypothetical protein compare
Atu0647 -0.8 -2.8 phosphoribosylamine--glycine ligase compare
Atu1075 -0.8 -3.1 amidophosphoribosyltransferase compare
Atu4013 -0.8 -3.3 adenylate cyclase compare
Atu1364 -0.8 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2807 -0.7 -3.3 cob(I)alamin adenosyltransferase compare
Atu3280 -0.7 -3.2 GntR family transcriptional regulator compare
Atu3497 -0.7 -2.0 hypothetical protein compare
Atu4223 -0.7 -1.5 sarcosine oxidase delta subunit compare
Atu1380 -0.7 -2.6 zinc metallopeptidase compare
Atu4075 -0.7 -3.3 glycogen synthase compare
Atu0399 -0.7 -2.4 dihydroorotase compare
Atu1845 -0.7 -2.7 phosphoribosylformylglycinamidine synthase I compare
Atu3593 -0.7 -3.8 hypothetical protein compare
Atu1644 -0.7 -2.6 hypothetical protein compare
Atu0486 -0.7 -2.3 dihydroorotate dehydrogenase compare
Atu4053 -0.7 -1.1 succinoglycan biosynthesis protein compare
Atu0537 -0.7 -3.1 histidinol dehydrogenase compare
Atu4873 -0.7 -3.4 TetR family transcriptional regulator compare
Atu0953 -0.7 -0.7 hypothetical protein compare
Atu3010 -0.7 -3.9 hypothetical protein compare
Atu2127 -0.7 -3.1 L-carnitine dehydratase compare
Atu1223 -0.7 -1.1 hypothetical protein compare
Atu2058 -0.7 -2.2 hypothetical protein compare
Atu3491 -0.7 -1.5 hypothetical protein compare
Atu1110 -0.7 -2.5 cytosol aminopeptidase compare
Atu2192 -0.7 -1.1 hypothetical protein compare
Atu0331 -0.7 -1.1 sigma-54 modulation protein compare
Atu0499 -0.7 -3.7 hypothetical protein compare
Atu3289 -0.7 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu4887 -0.7 -2.3 hypothetical protein compare
Atu1846 -0.7 -1.2 hypothetical protein compare
Atu3486 -0.7 -1.5 DeoR family transcriptional regulator compare
Atu0400 -0.7 -1.7 orotate phosphoribosyltransferase compare
Atu2728 -0.7 -2.6 beta (1-->2) glucan export ATP-binding protein compare
Atu0185 -0.7 -2.1 methylglyoxal synthase compare
Atu0956 -0.7 -2.5 phage prohead protease compare
Atu3598 -0.7 -0.9 thiol:disulfide interchange protein compare
Atu0488 -0.7 -2.0 hypothetical protein compare
Atu5424 -0.7 -4.2 oxidoreductase compare
Atu2067 -0.7 -0.8 hypothetical protein compare
Atu2803 -0.6 -1.6 Cobalamin biosynthesis associated protein compare
Atu3697 -0.6 -2.6 ATP-dependent protease LA 2 compare
Atu1777 -0.6 -2.4 hypothetical protein compare
Atu3249 -0.6 -2.5 septum formation inhibitor compare
Atu3017 -0.6 -1.0 phosphoglyceromutase compare
Atu3583 -0.6 -2.8 hypothetical protein compare
Atu8053 -0.6 -1.6 hypothetical protein compare
Atu1232 -0.6 -1.6 hypothetical protein compare
Atu4643 -0.6 -1.5 hypothetical protein compare
Atu1517 -0.6 -2.4 hypothetical protein compare
Atu2634 -0.6 -0.7 hypothetical protein compare
Atu3763 -0.6 -1.0 hypothetical protein compare
Atu4888 -0.6 -2.4 hypothetical protein compare
Atu1902 -0.6 -2.2 transketolase compare
Atu4686 -0.6 -1.7 hypothetical protein compare
Atu1323 -0.6 -1.7 hypothetical protein compare
Atu3465 -0.6 -1.4 metallo-beta-lactamase superfamily protein compare
Atu0119 -0.6 -0.9 hypothetical protein compare
Atu0272 -0.6 -2.2 transcriptional regulator, MarR family compare
Atu6153 -0.6 -2.3 conserved hypothetical protein compare
Atu1354 -0.6 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0510 -0.6 -3.4 pH adaption potassium efflux system protein compare
Atu1647 -0.6 -3.4 ABC transporter, membrane spanning protein compare
Atu2753 -0.6 -3.7 ATP-dependent helicase compare
Atu3755 -0.6 -2.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2347 -0.6 -3.8 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu0976 -0.6 -1.8 cycL protein compare
Atu4072 -0.6 -1.2 nodulation protein N compare
Atu1466 -0.6 -0.9 hypothetical protein compare
Atu4028 -0.6 -3.0 recombination regulator RecX compare


Specific Phenotypes

For 8 genes in this experiment

For stress Nitrofurantoin in Agrobacterium fabrum C58

For stress Nitrofurantoin across organisms