Experiment set4IT070 for Agrobacterium fabrum C58

Compare to:

R2A with Ceftazidime hydrate 4 mM

200 most important genes:

  gene name fitness t score description  
Atu0972 -7.5 -9.0 lipA protein compare
Atu2710 -6.7 -9.2 hypothetical protein compare
Atu1644 -4.4 -4.6 hypothetical protein compare
Atu3634 -3.7 -6.9 penicillin-binding protein dacf precursor compare
Atu3712 -3.7 -2.9 hypothetical protein compare
Atu0434 -3.4 -3.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0400 -3.1 -6.6 orotate phosphoribosyltransferase compare
Atu1646 -3.0 -6.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0647 -2.9 -5.7 phosphoribosylamine--glycine ligase compare
Atu1308 -2.8 -8.0 aspartate carbamoyl transferase catalytic subunit compare
Atu1688 -2.7 -4.1 indole-3-glycerol-phosphate synthase compare
Atu3616 -2.6 -7.9 hypothetical protein compare
Atu1647 -2.6 -9.4 ABC transporter, membrane spanning protein compare
Atu3468 -2.6 -1.6 hypothetical protein compare
Atu0017 -2.5 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1163 -2.4 -3.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0039 -2.4 -2.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu0298 -2.3 -5.5 orotidine 5 compare
Atu3210 -2.3 -12.6 ftsk cell division protein compare
Atu2289 -2.3 -10.6 anthranilate synthase component I and II compare
Atu0346 -2.3 -5.5 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0486 -2.2 -3.9 dihydroorotate dehydrogenase compare
Atu1307 -2.2 -5.1 dihydroorotase compare
Atu2067 -2.2 -1.8 hypothetical protein compare
Atu1687 -2.2 -5.0 anthranilate phosphoribosyltransferase compare
Atu3469 -2.2 -3.2 phosphoglyceromutase compare
Atu0399 -2.2 -5.9 dihydroorotase compare
Atu1645 -2.1 -7.0 ABC transporter, substrate binding protein compare
Atu1075 -2.0 -7.7 amidophosphoribosyltransferase compare
Atu1446 -2.0 -3.6 two component response regulator compare
Atu2193 -1.9 -1.5 hypothetical protein compare
Atu1140 -1.9 -3.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1141 -1.9 -6.0 Phosphoribosylglycinamide synthetase compare
Atu3754 -1.8 -6.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0184 -1.7 -3.1 glucokinase compare
Atu2040 -1.7 -6.3 phosphoserine phosphatase compare
Atu3755 -1.7 -5.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4108 -1.6 -8.1 ribonuclease D compare
Atu0422 -1.6 -1.8 ABC transporter, membrane spanning protein compare
Atu1354 -1.6 -1.5 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0225 -1.6 -1.4 hypothetical protein compare
Atu4896 -1.5 -2.4 acetyltransferase compare
Atu0687 -1.5 -3.0 hypothetical protein compare
Atu1844 -1.5 -2.1 Phosphoribosylformylglycinamidine synthetase compare
Atu0723 -1.5 -1.8 FAD dependent oxidoreductase compare
Atu3763 -1.5 -1.9 hypothetical protein compare
Atu1845 -1.4 -3.0 phosphoribosylformylglycinamidine synthase I compare
Atu1021 -1.4 -1.7 outer membrane protein compare
Atu4469 -1.4 -3.4 iron ABC transporter permease compare
Atu1110 -1.4 -3.7 cytosol aminopeptidase compare
Atu1351 -1.4 -3.7 hypothetical protein compare
Atu3706 -1.4 -5.5 D-3-phosphoglycerate dehydrogenase compare
Atu6098 -1.4 -0.9 transcriptional regulator, HTH family compare
Atu4616 -1.3 -2.1 dTDP-4-dehydrorhamnose reductase compare
Atu4149 -1.3 -6.4 UDP-glucose 6-dehydrogenase compare
Atu1131 -1.3 -6.6 outer membrane protein compare
Atu1810 -1.3 -1.4 hypothetical protein compare
Atu0141 -1.3 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu1030 -1.3 -1.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2304 -1.3 -7.0 bacteroid development protein compare
Atu3707 -1.3 -2.0 phosphoserine aminotransferase compare
Atu4890 -1.3 -1.9 IS426 transposase compare
Atu4471 -1.2 -6.0 ABC transporter substrate-binding protein compare
Atu2554 -1.2 -2.1 lysyl-tRNA synthetase compare
Atu3517 -1.2 -4.0 acetyltransferase compare
Atu1445 -1.2 -4.7 two component sensor kinase compare
Atu5115 -1.2 -1.2 hypothetical protein compare
Atu8056 -1.2 -1.2 hypothetical protein compare
Atu1373 -1.2 -6.0 hypothetical protein compare
Atu0566 -1.2 -2.2 hypothetical protein compare
Atu4317 -1.2 -2.5 TetR family transcriptional regulator compare
Atu1359 -1.2 -1.1 dnaK deletion suppressor protein compare
Atu1175 -1.2 -1.8 hypothetical protein compare
Atu4897 -1.2 -2.3 hypothetical protein compare
Atu4711 -1.2 -4.2 two component sensor kinase compare
Atu3518 -1.2 -5.3 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu0986 -1.2 -1.6 hypothetical protein compare
Atu1709 -1.2 -7.2 glycosyl hydrolase compare
Atu3011 -1.1 -3.1 ArsR family transcriptional regulator compare
Atu2582 -1.1 -3.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0257 -1.1 -6.5 hypothetical protein compare
Atu2133 -1.1 -5.2 hypothetical protein compare
Atu0036 -1.1 -2.9 hypothetical protein compare
Atu5430 -1.1 -0.7 hypothetical protein compare
Atu4884 -1.1 -3.5 hypothetical protein compare
Atu1850 -1.1 -2.8 phosphoribosylformylglycinamidine synthetase II compare
Atu1891 -1.1 -3.1 cobalamin biosynthesis protein compare
Atu4470 -1.1 -4.5 iron ABC transporter ATPase compare
Atu0188 -1.1 -3.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2590 -1.1 -5.6 hypothetical protein compare
Atu1225 -1.1 -1.6 hypothetical protein compare
Atu2237 -1.1 -4.2 cytochrome c1 compare
Atu0051 -1.0 -3.3 two component sensor kinase compare
Atu4148 -1.0 -3.1 UDP-glucuronic acid epimerase compare
Atu0189 -1.0 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu2577 -1.0 -7.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0421 -1.0 -1.3 ABC transporter, membrane spanning protein compare
Atu0971 -1.0 -2.8 two component sensor kinase compare
Atu0190 -1.0 -5.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu4468 -1.0 -5.2 iron transport ABC transporter permease compare
Atu2591 -1.0 -3.5 glucosyltransferase compare
Atu0086 -1.0 -1.0 ribosome-binding factor A compare
Atu8180 -1.0 -3.8 hypothetical protein compare
Atu3697 -0.9 -3.0 ATP-dependent protease LA 2 compare
Atu1364 -0.9 -3.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1779 -0.9 -1.9 hypothetical protein compare
Atu2267 -0.9 -4.3 hypothetical protein compare
Atu1076 -0.9 -2.4 colicin V production protein compare
Atu2368 -0.9 -1.2 hypothetical protein compare
Atu0845 -0.9 -4.6 hypothetical protein compare
Atu2207 -0.9 -3.1 two component sensor kinase compare
Atu2504 -0.9 -3.1 transcriptional regulator, GntR family compare
Atu1679 -0.9 -1.2 peptidyl prolyl cis-trans isomerase compare
Atu1232 -0.9 -1.6 hypothetical protein compare
Atu8191 -0.9 -1.6 hypothetical protein compare
Atu0886 -0.9 -1.3 hypothetical protein compare
Atu2583 -0.9 -5.3 glycosyltransferase compare
Atu2183 -0.9 -5.3 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0470 -0.9 -2.1 hypothetical protein compare
Atu8147 -0.9 -5.1 hypothetical protein compare
Atu2798 -0.9 -3.6 precorrin-6y methyltransferase compare
Atu2083 -0.9 -2.7 DNA repair protein RecN compare
Atu2472 -0.9 -1.2 hypothetical protein compare
Atu2793 -0.8 -3.5 cobyrinic acid a,c-diamide synthase compare
Atu2801 -0.8 -2.9 precorrin-2 C20 methyltransferase compare
Atu0920 -0.8 -3.6 hypothetical protein compare
Atu1774 -0.8 -4.2 ABC transporter, substrate binding protein (peptide) compare
Atu1705 -0.8 -2.7 SEC-independent protein translocase protein compare
Atu3031 -0.8 -1.2 hypothetical protein compare
Atu2585 -0.8 -2.4 hypothetical protein compare
Atu3353 -0.8 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu1686 -0.8 -4.6 peptidyl-prolyl cis-trans isomerse D compare
Atu2809 -0.8 -4.5 cobalamin biosynthesis protein compare
Atu2640 -0.8 -3.2 hypothetical protein compare
Atu4866 -0.8 -4.5 hypothetical protein compare
Atu1619 -0.8 -2.4 protein-export membrane protein SECG compare
Atu3483 -0.8 -2.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1463 -0.8 -2.9 glycine cleavage system component H compare
Atu2548 -0.8 -5.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1380 -0.8 -3.5 zinc metallopeptidase compare
Atu3018 -0.8 -2.9 hypothetical protein compare
Atu2006 -0.8 -4.8 molecular chaperone, DnaJ family compare
Atu2800 -0.8 -1.5 precorrin-3B C17-methyltransferase compare
Atu3299 -0.8 -1.8 hypothetical protein compare
Atu4869 -0.8 -2.6 hypothetical protein compare
Atu3006 -0.8 -3.3 hypothetical protein compare
Atu2113 -0.8 -2.0 N-acetylmuramoyl-L-alanine amidase compare
Atu0153 -0.8 -2.6 transcriptional regulator, Fur family compare
Atu0795 -0.8 -2.3 hypothetical protein compare
Atu1588 -0.8 -5.2 homoserine dehydrogenase compare
Atu8052 -0.8 -0.9 hypothetical protein compare
Atu0727 -0.8 -4.4 ferredoxin I compare
Atu0332 -0.8 -4.8 RNA polymerase sigma-54 factor compare
Atu2805 -0.7 -3.0 cobalamin synthesis protein compare
Atu0062 -0.7 -4.6 transcriptional regulator, ROK family compare
Atu2057 -0.7 -1.2 DNA helicase II compare
Atu4199 -0.7 -4.4 TetR family transcriptional regulator compare
Atu1968 -0.7 -1.5 hypothetical protein compare
Atu8190 -0.7 -3.0 hypothetical protein compare
Atu3613 -0.7 -3.1 hypothetical protein compare
Atu2804 -0.7 -4.5 cobaltochelatase subunit compare
Atu4888 -0.7 -3.0 hypothetical protein compare
Atu3293 -0.7 -3.3 D-amino acid dehydrogenase small subunit compare
Atu0142 -0.7 -1.4 cytochrome o ubiquinol oxidase subunit II compare
Atu2796 -0.7 -2.4 precorrin-4 C11-methyltransferase compare
Atu2802 -0.7 -3.7 precorrin-8X methylmutase compare
Atu0029 -0.7 -2.3 S-adenosylhomocysteine hydrolase compare
Atu3015 -0.7 -3.7 hypothetical protein compare
Atu4889 -0.7 -3.4 hypothetical protein compare
Atu8177 -0.7 -1.1 hypothetical protein compare
Atu1737 -0.7 -1.1 hypothetical protein compare
Atu3807 -0.7 -2.8 AsnC family transcriptional regulator compare
Atu0535 -0.7 -2.3 hypothetical protein compare
Atu1851 -0.7 -1.9 BolA/YrbA family protein compare
Atu4617 -0.7 -3.8 dTDP-D-glucose-4,6-dehydratase compare
Atu0726 -0.7 -4.1 ring hydroxylating dioxygenase, alpha-subunit compare
Atu4887 -0.7 -3.1 hypothetical protein compare
Atu8096 -0.7 -1.0 hypothetical protein compare
Atu4873 -0.7 -3.5 TetR family transcriptional regulator compare
Atu0163 -0.7 -2.5 tonB protein compare
Atu0784 -0.7 -1.7 hypothetical protein compare
Atu3627 -0.7 -1.5 hypothetical protein compare
Atu1621 -0.7 -3.7 hypothetical protein compare
Atu3759 -0.7 -1.0 hypothetical protein compare
Atu3042 -0.7 -3.2 hypothetical protein compare
Atu8118 -0.7 -3.4 putative universal stress protein compare
Atu1542 -0.7 -2.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1028 -0.7 -1.8 hypothetical protein compare
Atu1466 -0.7 -1.4 hypothetical protein compare
Atu1464 -0.7 -2.2 glycine cleavage system T protein, aminomethyltransferase compare
Atu1495 -0.6 -1.8 hypothetical protein compare
Atu1129 -0.6 -3.1 excinuclease ABC chain C compare
Atu4499 -0.6 -2.9 hypothetical protein compare
Atu5485 -0.6 -1.8 hypothetical protein compare
Atu5427 -0.6 -1.4 hypothetical protein compare
Atu2001 -0.6 -3.4 excinuclease ABC subunit B compare
Atu0386 -0.6 -1.3 hypothetical protein compare
Atu2073 -0.6 -2.3 membrane protein compare
Atu4618 -0.6 -3.9 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -0.6 -3.7 glycosyltransferase compare


Specific Phenotypes

For 19 genes in this experiment

For stress Ceftazidime hydrate in Agrobacterium fabrum C58

For stress Ceftazidime hydrate across organisms