| | gene | name | fitness | t score | description | |
|---|
| b1984 | asnW | +0.9 | 1.7 | tRNA-Asn (NCBI) | compare |
| b0782 | moaB | +0.8 | 1.5 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b4394 | yjjX | +0.8 | 2.9 | orf, hypothetical protein (VIMSS) | compare |
| b1429 | tehA | +0.7 | 1.8 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1058 | yceO | +0.7 | 2.2 | hypothetical protein (NCBI) | compare |
| b3134 | agaW | +0.6 | 1.9 | N-acetylgalactosamine-specific enzyme IIC component of PTS, fragment (pseudogene) (RefSeq) | compare |
| b1150 | ymfR | +0.6 | 1.3 | e14 prophage; predicted protein (NCBI) | compare |
| b3442 | yhhZ | +0.6 | 1.9 | hypothetical protein (NCBI) | compare |
| b0858 | ybjO | +0.6 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b0866 | ybjQ | +0.6 | 1.2 | hypothetical protein (NCBI) | compare |
| b1926 | fliT | +0.6 | 2.4 | predicted chaperone (NCBI) | compare |
| b2377 | yfdY | +0.6 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b3027 | ygiZ | +0.5 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b1427 | rimL | +0.5 | 2.3 | ribosomal-protein-L7/L12-serine acetyltransferase (NCBI) | compare |
| b4171 | miaA | +0.5 | 3.3 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b4451 | ryhB | +0.5 | 0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b4441 | glmY | +0.5 | 1.4 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b4508 | peaD | +0.5 | 1.1 | putative sensory transduction regulator (VIMSS) | compare |
| b4373 | rimI | +0.5 | 1.9 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b0450 | glnK | +0.5 | 1.8 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b1523 | yneG | +0.5 | 1.8 | hypothetical protein (NCBI) | compare |
| b1827 | kdgR | +0.5 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1693 | aroD | +0.5 | 2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2410 | yfeH | +0.5 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b1217 | chaB | +0.5 | 0.9 | cation transport regulator (NCBI) | compare |
| b1306 | pspC | +0.5 | 2.0 | DNA-binding transcriptional activator (NCBI) | compare |
| b0880 | cspD | +0.5 | 0.9 | cold shock protein homolog (NCBI) | compare |
| b2765 | ygcM | +0.5 | 1.6 | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) | compare |
| b4630 | ykgP | +0.5 | 1.7 | no description | compare |
| b2237 | inaA | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b4406 | yaeP | +0.5 | 0.9 | hypothetical protein (NCBI) | compare |
| b1819 | manZ | +0.5 | 2.3 | mannose-specific enzyme IID component of PTS (NCBI) | compare |
| b4234 | yjgA | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b1104 | ycfL | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b4546 | ypeB | +0.4 | 1.0 | hypothetical protein (NCBI) | compare |
| b4413 | sokC | +0.4 | 1.3 | regulatory antisense RNA (NCBI) | compare |
| b2432 | yfeY | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b3775 | ppiC | +0.4 | 1.7 | peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) | compare |
| b1263 | trpD | +0.4 | 1.6 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b4704 | arrS | +0.4 | 1.1 | Antisense sRNA ArrS, function unknown (NCBI) | compare |
| b2614 | grpE | +0.4 | 1.4 | heat shock protein (NCBI) | compare |
| b1553 | ydfP | +0.4 | 1.2 | Qin prophage; conserved protein (NCBI) | compare |
| b1669 | ydhT | +0.4 | 1.4 | hypothetical protein (NCBI) | compare |
| b2293 | yfbT | +0.4 | 0.8 | putative phosphatase (VIMSS) | compare |
| b4436 | ryeC | +0.4 | 0.6 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b0121 | speE | +0.4 | 2.4 | spermidine synthase (NCBI) | compare |
| b1946 | fliN | +0.4 | 1.0 | flagellar motor switch protein (NCBI) | compare |
| b1038 | csgF | +0.4 | 1.7 | predicted transport protein (NCBI) | compare |
| b1823 | cspC | +0.4 | 1.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b0862 | artQ | +0.4 | 1.8 | arginine transporter subunit (NCBI) | compare |
| b4060 | yjcB | +0.4 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b4544 | yfbW | +0.4 | 1.8 | hypothetical protein (NCBI) | compare |
| b3545 | proK | +0.4 | 1.0 | tRNA-Pro (NCBI) | compare |
| b1291 | sapD | +0.4 | 1.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1540 | ydfH | +0.4 | 0.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4509 | ylcG | +0.4 | 1.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1111 | ycfQ | +0.4 | 1.9 | orf, hypothetical protein (VIMSS) | compare |
| b2095 | gatZ | +0.4 | 2.7 | D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) | compare |
| b3504 | yhiS | +0.4 | 1.5 | hypothetical protein (RefSeq) | compare |
| b2419 | yfeK | +0.4 | 1.2 | hypothetical protein (NCBI) | compare |
| b3221 | yhcH | +0.4 | 1.6 | hypothetical protein (NCBI) | compare |
| b2398 | yfeC | +0.4 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1346 | ydaQ | +0.4 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0500 | ybbD | +0.4 | 1.2 | hypothetical protein (RefSeq) | compare |
| b3002 | yqhA | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b1446 | ydcY | +0.4 | 0.9 | hypothetical protein (NCBI) | compare |
| b2096 | gatY | +0.4 | 1.5 | tagatose-bisphosphate aldolase 1 (VIMSS) | compare |
| b2499 | purM | +0.4 | 1.7 | phosphoribosylaminoimidazole synthetase (NCBI) | compare |
| b1781 | yeaE | +0.4 | 2.2 | predicted oxidoreductase (NCBI) | compare |
| b2061 | wzb | +0.4 | 1.2 | protein-tyrosine phosphatase (NCBI) | compare |
| b4195 | ulaC | +0.4 | 1.6 | L-ascorbate-specific enzyme IIA component of PTS (NCBI) | compare |
| b4314 | fimA | +0.4 | 2.0 | major type 1 subunit fimbrin (pilin) (NCBI) | compare |
| b4592 | yccB | +0.4 | 0.4 | hypothetical protein (RefSeq) | compare |
| b2951 | yggS | +0.4 | 1.3 | predicted enzyme (NCBI) | compare |
| b3098 | yqjD | +0.4 | 1.1 | hypothetical protein (NCBI) | compare |
| b2433 | b2433 | +0.3 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4675 | yoaJ | +0.3 | 1.8 | expressed protein (RefSeq) | compare |
| b0523 | purE | +0.3 | 1.5 | phosphoribosylaminoimidazole carboxylase catalytic subunit (NCBI) | compare |
| b4227 | ytfQ | +0.3 | 1.9 | predicted sugar transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | compare |
| b0857 | potI | +0.3 | 1.2 | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1868 | yecE | +0.3 | 1.1 | hypothetical protein (NCBI) | compare |
| b4477 | dgoA | +0.3 | 1.9 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (NCBI) | compare |
| b0389 | yaiA | +0.3 | 1.4 | hypothetical protein (NCBI) | compare |
| b3029 | ygiN | +0.3 | 1.2 | quinol monooxygenase (NCBI) | compare |
| b4503 | yafF | +0.3 | 0.8 | no description | compare |
| b0502 | ylbG | +0.3 | 1.4 | no description | compare |
| b1418 | cybB | +0.3 | 0.9 | cytochrome b(561) (VIMSS) | compare |
| b0822 | ybiV | +0.3 | 1.2 | predicted hydrolase (NCBI) | compare |
| b3120 | yhaB | +0.3 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2488 | hyfH | +0.3 | 1.7 | hydrogenase 4, Fe-S subunit (NCBI) | compare |
| b2977 | glcG | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b4519 | icdC | +0.3 | 2.1 | no description | compare |
| b2673 | nrdH | +0.3 | 0.8 | glutaredoxin-like protein (NCBI) | compare |
| b0717 | ybgP | +0.3 | 1.7 | predicted assembly protein (NCBI) | compare |
| b0550 | rusA | +0.3 | 1.2 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b1573 | ydfC | +0.3 | 1.0 | Qin prophage; predicted protein (RefSeq) | compare |
| b0746 | valZ | +0.3 | 1.1 | tRNA-Val (NCBI) | compare |
| b1962 | yedJ | +0.3 | 1.6 | predicted phosphohydrolase (NCBI) | compare |
| b1379 | hslJ | +0.3 | 1.6 | heat-inducible protein (NCBI) | compare |
| b3646 | yicG | +0.3 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0714 | nei | +0.3 | 1.4 | endonuclease VIII/ 5-formyluracil/5-hydroxymethyluracil DNA glycosylase (NCBI) | compare |
| b0163 | yaeH | +0.3 | 1.6 | hypothetical protein (NCBI) | compare |
| b0534 | sfmF | +0.3 | 2.2 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3155 | yhbQ | +0.3 | 1.8 | hypothetical protein (NCBI) | compare |
| b2145 | yeiS | +0.3 | 1.5 | predicted inner membrane protein (NCBI) | compare |
| b4567 | yjjZ | +0.3 | 1.9 | hypothetical protein (NCBI) | compare |
| b4144 | yjeI | +0.3 | 0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2156 | lysP | +0.3 | 2.4 | lysine transporter (NCBI) | compare |
| b1188 | ycgB | +0.3 | 1.9 | ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) | compare |
| b4374 | yjjG | +0.3 | 1.8 | nucleotidase (NCBI) | compare |
| b1595 | ynfL | +0.3 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2259 | pmrD | +0.3 | 0.8 | polymyxin resistance protein B (VIMSS) | compare |
| b1670 | ydhU | +0.3 | 1.6 | predicted cytochrome (NCBI) | compare |
| b1754 | b1754 | +0.3 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1633 | nth | +0.3 | 1.3 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b2021 | hisC | +0.3 | 1.2 | histidinol-phosphate aminotransferase (NCBI) | compare |
| b3136 | agaS | +0.3 | 1.7 | tagatose-6-phosphate ketose/aldose isomerase (NCBI) | compare |
| b2718 | hycH | +0.3 | 1.3 | protein required for maturation of hydrogenase 3 (NCBI) | compare |
| b1846 | yebE | +0.3 | 1.5 | hypothetical protein (NCBI) | compare |
| b2768 | ygcP | +0.3 | 1.6 | predicted anti-terminator regulatory protein (NCBI) | compare |
| b0430 | cyoC | +0.3 | 1.2 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3206 | npr | +0.3 | 1.8 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b4614 | sokA | +0.3 | 1.6 | no description | compare |
| b2442 | intZ | +0.3 | 1.7 | CPZ-55 prophage; predicted integrase (RefSeq) | compare |
| b4001 | yjaH | +0.3 | 1.3 | hypothetical protein (NCBI) | compare |
| b0238 | gpt | +0.3 | 0.9 | xanthine phosphoribosyltransferase (NCBI) | compare |
| b4533 | ynfO | +0.3 | 1.0 | Qin prophage; predicted protein (NCBI) | compare |
| b2248 | yfaX | +0.3 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b4655 | ythA | +0.3 | 0.9 | expressed protein (RefSeq) | compare |
| b1730 | ydjO | +0.3 | 1.3 | predicted protein (RefSeq) | compare |
| b1575 | dicB | +0.3 | 1.4 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0248 | yafX | +0.3 | 1.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0236 | prfH | +0.3 | 1.4 | peptide chain release factor 2 (NCBI) | compare |
| b4158 | yjeO | +0.3 | 1.3 | conserved inner membrane protein (NCBI) | compare |
| b4193 | sgaT | +0.3 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b2094 | gatA | +0.3 | 1.7 | galactitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b0120 | speD | +0.3 | 2.0 | S-adenosylmethionine decarboxylase proenzyme (NCBI) | compare |
| b1728 | ydjM | +0.3 | 1.1 | predicted inner membrane protein regulated by LexA (RefSeq) | compare |
| b1484 | ddpD | +0.3 | 1.4 | D-ala-D-ala transporter subunit (NCBI) | compare |
| b4000 | hupA | +0.3 | 1.1 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b0836 | yliH | +0.3 | 0.8 | hypothetical protein (NCBI) | compare |
| b1312 | ycjP | +0.3 | 1.5 | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4319 | fimG | +0.3 | 1.4 | minor component of type 1 fimbriae (NCBI) | compare |
| b0158 | btuF | +0.3 | 1.8 | vitamin B12-transporter protein BtuF (NCBI) | compare |
| b4438 | cyaR | +0.3 | 0.8 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1920 | fliY | +0.3 | 0.9 | cystine transporter subunit (NCBI) | compare |
| b4369 | leuP | +0.3 | 1.0 | tRNA-Leu (NCBI) | compare |
| b1305 | pspB | +0.3 | 0.6 | phage shock protein B (NCBI) | compare |
| b1300 | puuC | +0.3 | 0.9 | gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent (NCBI) | compare |
| b3483 | yhhH | +0.3 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b4603 | rseX | +0.3 | 0.5 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b1336 | ydaH | +0.3 | 1.4 | putative pump protein (transport) (VIMSS) | compare |
| b1635 | gst | +0.3 | 1.5 | glutathionine S-transferase (NCBI) | compare |
| b3868 | glnG | +0.3 | 1.5 | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | compare |
| b0250 | ykfB | +0.3 | 1.3 | CP4-6 prophage; predicted protein (NCBI) | compare |
| b0207 | dkgB | +0.3 | 1.7 | 2,5-diketo-D-gluconate reductase B (NCBI) | compare |
| b2455 | eutE | +0.3 | 0.9 | predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI) | compare |
| b3378 | yhfU | +0.3 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b0825 | mipB | +0.3 | 1.1 | putative transaldolase (VIMSS) | compare |
| b1853 | yebK | +0.3 | 0.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1270 | btuR | +0.3 | 0.8 | cob(I)yrinic acid a,c-diamide adenosyltransferase (NCBI) | compare |
| b0453 | ybaY | +0.3 | 1.5 | glycoprotein/polysaccharide metabolism (VIMSS) | compare |
| b3806 | cyaA | +0.3 | 1.5 | adenylate cyclase (NCBI) | compare |
| b0527 | ybcI | +0.3 | 1.0 | conserved inner membrane protein (NCBI) | compare |
| b2919 | ygfG | +0.3 | 1.3 | putative enzyme (VIMSS) | compare |
| b2445 | yffN | +0.3 | 1.2 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4561 | insM | +0.3 | 1.3 | transposase (RefSeq) | compare |
| b1729 | ydjN | +0.3 | 0.9 | predicted transporter (NCBI) | compare |
| b2725 | hycA | +0.3 | 1.0 | regulator of the transcriptional regulator FhlA (NCBI) | compare |
| b1315 | ycjS | +0.3 | 1.6 | predicted oxidoreductase, NADH-binding (NCBI) | compare |
| b2846 | yqeH | +0.3 | 0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4370 | leuQ | +0.3 | 0.9 | tRNA-Leu (NCBI) | compare |
| b4660 | yhiL | +0.3 | 1.0 | no description | compare |
| b0560 | nohB | +0.3 | 0.7 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b1012 | b1012 | +0.2 | 1.1 | orf, hypothetical protein (VIMSS) | compare |
| b1949 | fliQ | +0.2 | 1.0 | flagellar biosynthesis protein Q (NCBI) | compare |
| b0099 | mutT | +0.2 | 1.2 | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP (NCBI) | compare |
| b1685 | ydiH | +0.2 | 0.5 | predicted protein (RefSeq) | compare |
| b1818 | manY | +0.2 | 0.8 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b0252 | yafZ | +0.2 | 1.5 | orf, hypothetical protein (VIMSS) | compare |
| b3739 | atpI | +0.2 | 1.6 | membrane-bound ATP synthase, dispensable protein, affects expression of atpB (VIMSS) | compare |
| b1426 | ydcH | +0.2 | 0.6 | orf, hypothetical protein (VIMSS) | compare |
| b1101 | ptsG | +0.2 | 1.9 | fused glucose-specific PTS enzymes: IIB component/IIC component (NCBI) | compare |
| b4329 | yjiG | +0.2 | 1.2 | conserved inner membrane protein (NCBI) | compare |
| b1410 | ynbC | +0.2 | 1.7 | predicted hydrolase (NCBI) | compare |
| b1476 | fdnI | +0.2 | 0.5 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b1891 | flhC | +0.2 | 1.3 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b0852 | rimK | +0.2 | 1.2 | ribosomal protein S6 modification protein (NCBI) | compare |
| b2183 | rsuA | +0.2 | 1.1 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b1004 | wrbA | +0.2 | 1.4 | TrpR binding protein WrbA (NCBI) | compare |
| b1303 | pspF | +0.2 | 1.0 | psp operon transcriptional activator (VIMSS) | compare |
| b2100 | yegV | +0.2 | 1.5 | predicted kinase (NCBI) | compare |
| b4367 | fhuF | +0.2 | 1.8 | ferric iron reductase involved in ferric hydroximate transport (NCBI) | compare |
| b1482 | osmC | +0.2 | 0.8 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b0929 | ompF | +0.2 | 1.6 | outer membrane porin 1a (Ia;b;F) (NCBI) | compare |
| b2236 | yfaE | +0.2 | 0.7 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b3361 | fic | +0.2 | 1.0 | stationary-phase protein, cell division (NCBI) | compare |
| b2500 | purN | +0.2 | 1.3 | phosphoribosylglycinamide formyltransferase (NCBI) | compare |
| b0708 | phr | +0.2 | 1.3 | deoxyribodipyrimidine photolyase, FAD-binding (NCBI) | compare |
| b4598 | yncL | +0.2 | 0.6 | hypothetical protein (RefSeq) | compare |