Experiment set4IT068 for Escherichia coli BW25113

LB with 2,4-Dinitrophenol 1 mM

Group: stress
Media: LB + 2,4-Dinitrophenol (1 mM)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Mitch on 3/18/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 6 genes in this experiment

For stress 2,4-Dinitrophenol in Escherichia coli BW25113

For stress 2,4-Dinitrophenol across organisms

SEED Subsystems

Subsystem	#Specific
D-Tagatose and Galactitol Utilization	2

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Galactose metabolism
• Glycolysis / Gluconeogenesis
• Fructose and mannose metabolism
• Ascorbate and aldarate metabolism
• Starch and sucrose metabolism
• Nucleotide sugars metabolism
• Aminosugars metabolism

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
galactitol degradation	5	5	3
D-galactosamine and N-acetyl-D-galactosamine degradation	4	4	2
N-acetyl-D-galactosamine degradation	5	4	2
lactose degradation I	5	2	2
D-tagatose degradation	3	1	1
superpathway of hexitol degradation (bacteria)	18	18	3