Experiment set4IT066 for Escherichia coli BW25113

Compare to:

LB with 2,4-Dinitrophenol 2 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b2016 yeeZ -4.2 -9.5 predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) compare
b2686 emrB -4.1 -10.9 multidrug efflux system protein (NCBI) compare
b3884 yihW -4.0 -10.3 putative DEOR-type transcriptional regulator (VIMSS) compare
b2685 emrA -3.7 -11.0 multidrug efflux system (NCBI) compare
b3625 rfaY -3.5 -17.4 lipopolysaccharide core biosynthesis protein (NCBI) compare
b0871 poxB -3.5 -8.1 pyruvate dehydrogenase (NCBI) compare
b2707 srlR -3.2 -10.1 DNA-bindng transcriptional repressor (NCBI) compare
b2113 mrp -2.9 -8.5 putative ATPase (VIMSS) compare
b3803 hemX -2.8 -12.9 predicted uroporphyrinogen III methylase (NCBI) compare
b3601 mtlR -2.8 -9.7 DNA-binding repressor (NCBI) compare
b0377 sbmA -2.8 -12.1 predicted transporter (NCBI) compare
b0427 yajR -2.7 -11.0 putative transport protein (VIMSS) compare
b3591 selA -2.6 -13.0 selenocysteine synthase (NCBI) compare
b3892 fdoI -2.6 -11.1 formate dehydrogenase-O, cytochrome b556 subunit (NCBI) compare
b4324 uxuR -2.6 -11.3 DNA-binding transcriptional repressor (NCBI) compare
b4383 deoB -2.6 -11.9 phosphopentomutase (NCBI) compare
b3590 selB -2.5 -14.8 selenocysteinyl-tRNA-specific translation factor (NCBI) compare
b3891 fdhE -2.5 -11.2 formate dehydrogenase accessory protein FdhE (NCBI) compare
b3802 hemY -2.4 -14.4 predicted protoheme IX synthesis protein (NCBI) compare
b3472 b3472 -2.4 -11.4 orf, hypothetical protein (VIMSS) compare
b3131 agaR -2.4 -5.2 DNA-binding transcriptional dual regulator (NCBI) compare
b3894 fdoG -2.4 -15.9 formate dehydrogenase-O, large subunit (NCBI) compare
b3895 fdhD -2.3 -9.5 formate dehydrogenase accessory protein (NCBI) compare
b3124 garK -2.3 -8.2 glycerate kinase I (RefSeq) compare
b2174 b2174 -2.2 -10.0 orf, hypothetical protein (VIMSS) compare
b3893 fdoH -2.2 -10.3 formate dehydrogenase-O, Fe-S subunit (NCBI) compare
b2029 gnd -2.2 -10.1 6-phosphogluconate dehydrogenase (NCBI) compare
b1463 nhoA -2.1 -7.9 N-hydroxyarylamine O-acetyltransferase (NCBI) compare
b2325 yfcL -2.1 -5.1 hypothetical protein (NCBI) compare
b3926 glpK -2.1 -16.1 glycerol kinase (NCBI) compare
b1764 selD -2.0 -5.5 selenophosphate synthetase (NCBI) compare
b2493 yfgO -1.8 -6.4 predicted inner membrane protein (NCBI) compare
b0826 moeB -1.8 -5.7 molybdopterin biosynthesis protein MoeB (NCBI) compare
b3418 malT -1.8 -12.7 transcriptional regulator MalT (NCBI) compare
b4260 pepA -1.7 -10.3 leucyl aminopeptidase (NCBI) compare
b3963 fabR -1.7 -10.0 DNA-binding transcriptional repressor (RefSeq) compare
b4036 lamB -1.6 -9.4 maltoporin precursor (NCBI) compare
b3785 wzzE -1.5 -9.6 putative transport protein (VIMSS) compare
b3146 yraL -1.5 -6.6 predicted methyltransferase (NCBI) compare
b4046 yjbK -1.5 -7.1 putative regulator (VIMSS) compare
b4384 deoD -1.4 -8.8 purine nucleoside phosphorylase (NCBI) compare
b0008 talB -1.3 -7.5 transaldolase B (NCBI) compare
b2908 pepP -1.3 -5.7 proline aminopeptidase P II (NCBI) compare
b4251 yjgJ -1.3 -7.5 orf, hypothetical protein (VIMSS) compare
b3646 yicG -1.3 -6.7 orf, hypothetical protein (VIMSS) compare
b4089 rpiR -1.2 -6.1 transcriptional repressor of rpiB expression (VIMSS) compare
b2240 glpT -1.1 -7.2 sn-glycerol-3-phosphate transporter (NCBI) compare
b4065 yjcE -1.1 -8.0 predicted cation/proton antiporter (NCBI) compare
b3574 yiaJ -1.0 -5.1 predicted DNA-binding transcriptional repressor (NCBI) compare
b1805 fadD +1.1 8.3 acyl-CoA synthase (NCBI) compare
b1661 cfa +1.3 7.2 cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) (NCBI) compare
b2344 fadL +1.3 9.1 long-chain fatty acid outer membrane transporter (RefSeq) compare
b1238 tdk +1.3 9.0 thymidine kinase (NCBI) compare
b0411 tsx +1.4 11.1 nucleoside channel, receptor of phage T6 and colicin K (NCBI) compare
b2393 nupC +1.5 9.8 nucleoside (except guanosine) transporter (NCBI) compare
b3009 yghB +1.6 9.7 conserved inner membrane protein (NCBI) compare
b3397 nudE +1.7 12.7 ADP-ribose diphosphatase (NCBI) compare
b3423 glpR +1.7 13.4 DNA-binding transcriptional repressor (NCBI) compare
b2095 gatZ +1.9 8.0 D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) compare
b2092 gatC +1.9 7.5 galactitol-specific enzyme IIC component of PTS (NCBI) compare


Specific phenotypes for stress 2,4-Dinitrophenol across organisms