Experiment set4IT065 for Escherichia coli BW25113

Compare to:

LB with 2,4-Dinitrophenol 2 mM

Genes with specific phenotypes:

  gene name fitness t score description  
b2686 emrB -5.5 -11.8 multidrug efflux system protein (NCBI) compare
b3884 yihW -5.4 -9.8 putative DEOR-type transcriptional regulator (VIMSS) compare
b2016 yeeZ -5.1 -10.4 predicted epimerase, with NAD(P)-binding Rossmann-fold domain (NCBI) compare
b2685 emrA -4.7 -11.4 multidrug efflux system (NCBI) compare
b0871 poxB -4.4 -11.0 pyruvate dehydrogenase (NCBI) compare
b3625 rfaY -3.3 -14.3 lipopolysaccharide core biosynthesis protein (NCBI) compare
b2707 srlR -3.3 -9.3 DNA-bindng transcriptional repressor (NCBI) compare
b3131 agaR -3.3 -6.0 DNA-binding transcriptional dual regulator (NCBI) compare
b3803 hemX -3.3 -15.0 predicted uroporphyrinogen III methylase (NCBI) compare
b0427 yajR -3.2 -13.5 putative transport protein (VIMSS) compare
b0377 sbmA -3.2 -13.7 predicted transporter (NCBI) compare
b3601 mtlR -3.2 -10.7 DNA-binding repressor (NCBI) compare
b3472 b3472 -2.9 -10.7 orf, hypothetical protein (VIMSS) compare
b4324 uxuR -2.8 -12.0 DNA-binding transcriptional repressor (NCBI) compare
b2113 mrp -2.8 -8.2 putative ATPase (VIMSS) compare
b1764 selD -2.6 -6.2 selenophosphate synthetase (NCBI) compare
b4383 deoB -2.4 -10.6 phosphopentomutase (NCBI) compare
b2174 b2174 -2.4 -7.2 orf, hypothetical protein (VIMSS) compare
b4222 ytfP -2.3 -6.9 hypothetical protein (NCBI) compare
b3895 fdhD -2.3 -9.4 formate dehydrogenase accessory protein (NCBI) compare
b3124 garK -2.2 -10.3 glycerate kinase I (RefSeq) compare
b3802 hemY -2.1 -12.4 predicted protoheme IX synthesis protein (NCBI) compare
b3590 selB -2.1 -12.7 selenocysteinyl-tRNA-specific translation factor (NCBI) compare
b3891 fdhE -2.1 -9.1 formate dehydrogenase accessory protein FdhE (NCBI) compare
b2029 gnd -2.1 -9.0 6-phosphogluconate dehydrogenase (NCBI) compare
b3892 fdoI -2.0 -8.1 formate dehydrogenase-O, cytochrome b556 subunit (NCBI) compare
b0814 ompX -1.9 -5.2 outer membrane protein X (NCBI) compare
b3963 fabR -1.9 -11.8 DNA-binding transcriptional repressor (RefSeq) compare
b4036 lamB -1.9 -10.8 maltoporin precursor (NCBI) compare
b3894 fdoG -1.8 -13.1 formate dehydrogenase-O, large subunit (NCBI) compare
b3418 malT -1.8 -12.1 transcriptional regulator MalT (NCBI) compare
b3591 selA -1.8 -11.5 selenocysteine synthase (NCBI) compare
b3926 glpK -1.8 -12.7 glycerol kinase (NCBI) compare
b3893 fdoH -1.7 -8.9 formate dehydrogenase-O, Fe-S subunit (NCBI) compare
b3146 yraL -1.7 -6.5 predicted methyltransferase (NCBI) compare
b4484 cpxP -1.6 -5.6 periplasmic protein combats stress (NCBI) compare
b2493 yfgO -1.5 -6.2 predicted inner membrane protein (NCBI) compare
b3785 wzzE -1.5 -9.3 putative transport protein (VIMSS) compare
b2735 ygbI -1.5 -6.6 predicted DNA-binding transcriptional regulator (RefSeq) compare
b4393 trpR -1.5 -6.0 Trp operon repressor (NCBI) compare
b4065 yjcE -1.4 -9.3 predicted cation/proton antiporter (NCBI) compare
b4384 deoD -1.4 -7.8 purine nucleoside phosphorylase (NCBI) compare
b4046 yjbK -1.3 -5.5 putative regulator (VIMSS) compare
b3646 yicG -1.3 -7.0 orf, hypothetical protein (VIMSS) compare
b1463 nhoA -1.3 -5.3 N-hydroxyarylamine O-acetyltransferase (NCBI) compare
b4260 pepA -1.3 -8.3 leucyl aminopeptidase (NCBI) compare
b0008 talB -1.2 -5.8 transaldolase B (NCBI) compare
b4251 yjgJ -1.1 -5.2 orf, hypothetical protein (VIMSS) compare
b4089 rpiR -1.1 -5.4 transcriptional repressor of rpiB expression (VIMSS) compare
b0411 tsx +1.0 7.8 nucleoside channel, receptor of phage T6 and colicin K (NCBI) compare
b2344 fadL +1.1 8.9 long-chain fatty acid outer membrane transporter (RefSeq) compare
b3423 glpR +1.5 12.5 DNA-binding transcriptional repressor (NCBI) compare
b3397 nudE +1.7 13.9 ADP-ribose diphosphatase (NCBI) compare
b2095 gatZ +1.8 7.4 D-tagatose 1,6-bisphosphate aldolase 2, subunit (NCBI) compare
b3009 yghB +1.8 13.5 conserved inner membrane protein (NCBI) compare
b2092 gatC +1.9 7.9 galactitol-specific enzyme IIC component of PTS (NCBI) compare


Specific phenotypes for stress 2,4-Dinitrophenol across organisms