Experiment set4IT065 for Agrobacterium fabrum C58

Compare to:

R2A with Cephalothin sodium salt 0.9 mM

200 most important genes:

  gene name fitness t score description  
Atu0972 -7.3 -8.7 lipA protein compare
Atu2710 -6.6 -9.0 hypothetical protein compare
Atu0017 -3.8 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3712 -3.4 -2.0 hypothetical protein compare
Atu4149 -3.0 -9.2 UDP-glucose 6-dehydrogenase compare
Atu2592 -2.6 -5.4 hypothetical protein compare
Atu2289 -2.5 -12.7 anthranilate synthase component I and II compare
Atu4148 -2.4 -5.4 UDP-glucuronic acid epimerase compare
Atu0486 -2.4 -6.6 dihydroorotate dehydrogenase compare
Atu3077 -2.4 -11.2 beta-lactamase conserved
Atu0434 -2.4 -1.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0189 -2.4 -4.7 ABC transporter, membrane spanning protein (peptide) compare
Atu1182 -2.2 -3.0 hypothetical protein compare
Atu3078 -2.2 -6.1 LysR family transcriptional regulator compare
Atu0422 -2.2 -2.5 ABC transporter, membrane spanning protein compare
Atu2585 -2.2 -4.3 hypothetical protein compare
Atu2591 -2.1 -6.9 glucosyltransferase compare
Atu1687 -2.1 -5.5 anthranilate phosphoribosyltransferase compare
Atu2590 -2.0 -6.6 hypothetical protein compare
Atu1446 -2.0 -3.3 two component response regulator compare
Atu0190 -2.0 -7.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2577 -1.9 -12.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu0298 -1.9 -5.1 orotidine 5 compare
Atu0188 -1.9 -3.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0400 -1.9 -4.2 orotate phosphoribosyltransferase compare
Atu0399 -1.9 -5.1 dihydroorotase compare
Atu0421 -1.8 -2.0 ABC transporter, membrane spanning protein compare
Atu1373 -1.8 -8.3 hypothetical protein compare
Atu2583 -1.8 -8.5 glycosyltransferase compare
Atu0769 -1.8 -2.3 protoheme IX farnesyltransferase compare
Atu1844 -1.8 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2582 -1.8 -6.2 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1307 -1.7 -6.6 dihydroorotase compare
Atu1774 -1.6 -7.9 ABC transporter, substrate binding protein (peptide) compare
Atu3469 -1.6 -2.8 phosphoglyceromutase compare
Atu0598 -1.6 -8.0 phosphogluconate dehydratase compare
Atu0346 -1.6 -4.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1308 -1.5 -4.8 aspartate carbamoyl transferase catalytic subunit compare
Atu2584 -1.5 -3.3 hypothetical protein compare
Atu3763 -1.5 -2.9 hypothetical protein compare
Atu1688 -1.5 -4.1 indole-3-glycerol-phosphate synthase compare
Atu3754 -1.4 -4.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3750 -1.4 -2.9 thiamine-phosphate pyrophosphorylase compare
Atu0041 -1.4 -2.0 glutamine amidotransferase compare
Atu2067 -1.4 -1.4 hypothetical protein compare
Atu1845 -1.3 -3.6 phosphoribosylformylglycinamidine synthase I compare
Atu2640 -1.3 -4.9 hypothetical protein compare
Atu5160 -1.3 -3.6 transcriptional regulator protein compare
Atu0039 -1.3 -1.8 imidazoleglycerol-phosphate synthase cyclase compare
Atu4882 -1.3 -3.3 hypothetical protein compare
Atu1149 -1.3 -1.5 adenylate cyclase compare
Atu2692 -1.3 -2.8 intracellular septation protein compare
Atu1140 -1.3 -4.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0647 -1.2 -4.1 phosphoribosylamine--glycine ligase compare
Atu1075 -1.2 -6.9 amidophosphoribosyltransferase compare
Atu1110 -1.2 -3.0 cytosol aminopeptidase compare
Atu1686 -1.2 -7.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0036 -1.2 -2.5 hypothetical protein compare
Atu2728 -1.2 -4.4 beta (1-->2) glucan export ATP-binding protein compare
Atu0184 -1.2 -2.8 glucokinase compare
Atu4317 -1.2 -2.3 TetR family transcriptional regulator compare
Atu0030 -1.2 -1.6 phosphocarrier protein HPr compare
Atu1588 -1.2 -6.1 homoserine dehydrogenase compare
Atu2798 -1.1 -4.7 precorrin-6y methyltransferase compare
Atu0723 -1.1 -2.1 FAD dependent oxidoreductase compare
Atu0876 -1.1 -2.2 superoxide dismutase compare
Atu3706 -1.1 -4.8 D-3-phosphoglycerate dehydrogenase compare
Atu3634 -1.1 -4.1 penicillin-binding protein dacf precursor compare
Atu1891 -1.1 -3.4 cobalamin biosynthesis protein compare
Atu3707 -1.1 -2.4 phosphoserine aminotransferase compare
Atu1542 -1.1 -5.0 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2793 -1.1 -3.0 cobyrinic acid a,c-diamide synthase compare
Atu2809 -1.0 -6.7 cobalamin biosynthesis protein compare
Atu3486 -1.0 -2.5 DeoR family transcriptional regulator compare
Atu1445 -1.0 -2.9 two component sensor kinase compare
Atu1694 -1.0 -2.0 hypothetical protein compare
Atu1131 -1.0 -5.5 outer membrane protein compare
Atu4711 -1.0 -4.6 two component sensor kinase compare
Atu2684 -1.0 -1.2 hypothetical protein compare
Atu2237 -1.0 -3.4 cytochrome c1 compare
Atu2796 -1.0 -3.9 precorrin-4 C11-methyltransferase compare
Atu0031 -1.0 -1.5 PTS system, IIA component compare
Atu1030 -1.0 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3739 -1.0 -2.4 phosphoglycerate kinase compare
Atu2802 -1.0 -4.4 precorrin-8X methylmutase compare
Atu1646 -0.9 -4.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0846 -0.9 -2.3 transcriptional regulator, MarR family compare
Atu4618 -0.9 -5.8 dTDP-rhamnose-3,5-epimerase compare
Atu3009 -0.9 -1.2 exopolysaccharide production protein compare
Atu3461 -0.9 -1.6 GntR family transcriptional regulator compare
Atu1141 -0.9 -3.6 Phosphoribosylglycinamide synthetase compare
Atu1163 -0.9 -1.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3353 -0.9 -5.0 mannose-1-phosphate guanylyltransferase compare
Atu3210 -0.9 -6.2 ftsk cell division protein compare
Atu1644 -0.9 -1.8 hypothetical protein compare
Atu0977 -0.9 -3.1 serine protease DO-like protease compare
Atu3518 -0.9 -4.1 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3727 -0.9 -2.9 hypothetical protein compare
Atu4617 -0.9 -4.7 dTDP-D-glucose-4,6-dehydratase compare
Atu2043 -0.9 -4.1 htrA family protein compare
Atu0470 -0.8 -2.1 hypothetical protein compare
Atu0976 -0.8 -1.4 cycL protein compare
Atu3779 -0.8 -4.6 lytic murein transglycosylase compare
Atu1339 -0.8 -1.9 ribonuclease E compare
Atu4418 -0.8 -3.3 glutaryl-CoA dehydrogenase compare
Atu2040 -0.8 -2.6 phosphoserine phosphatase compare
Atu0354 -0.8 -2.0 ferric uptake regulator compare
Atu1444 -0.8 -3.3 nitrogen regulation protein compare
Atu2183 -0.8 -3.7 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0103 -0.8 -5.5 penicillin-binding protein compare
Atu2801 -0.8 -2.4 precorrin-2 C20 methyltransferase compare
Atu2808 -0.8 -4.0 cobyric acid synthase compare
Atu0971 -0.8 -2.7 two component sensor kinase compare
Atu1302 -0.8 -1.1 hypothetical protein compare
Atu8025 -0.8 -1.3 hypothetical protein compare
Atu3018 -0.8 -2.3 hypothetical protein compare
Atu4773 -0.8 -1.4 two component response regulator compare
Atu2634 -0.8 -1.4 hypothetical protein compare
Atu0040 -0.8 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2805 -0.8 -2.8 cobalamin synthesis protein compare
Atu2270 -0.8 -1.5 ATP-dependent Clp protease, proteolytic subunit compare
Atu3014 -0.8 -1.1 hypothetical protein compare
Atu2207 -0.8 -2.1 two component sensor kinase compare
Atu0687 -0.8 -1.3 hypothetical protein compare
Atu2113 -0.8 -1.5 N-acetylmuramoyl-L-alanine amidase compare
Atu0141 -0.8 -1.2 cytochrome O ubiquinol oxidase subunit I compare
Atu3001 -0.7 -2.5 hypothetical protein compare
Atu1620 -0.7 -4.2 triosephosphate isomerase compare
Atu1645 -0.7 -3.8 ABC transporter, substrate binding protein compare
Atu0322 -0.7 -2.9 enoyl CoA hydratase compare
Atu1344 -0.7 -1.7 hypothetical protein compare
Atu2804 -0.7 -4.3 cobaltochelatase subunit compare
Atu8144 -0.7 -2.3 hypothetical protein compare
Atu2803 -0.7 -2.6 Cobalamin biosynthesis associated protein compare
Atu5513 -0.7 -0.9 cold shock protein compare
Atu0401 -0.7 -2.1 fructokinase compare
Atu4108 -0.7 -4.2 ribonuclease D compare
Atu1364 -0.7 -2.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3311 -0.7 -5.2 phosphomannose isomerase compare
Atu3697 -0.7 -2.9 ATP-dependent protease LA 2 compare
Atu1468 -0.7 -3.8 hypothetical protein compare
Atu0535 -0.7 -3.4 hypothetical protein compare
Atu2217 -0.7 -2.2 hypothetical protein compare
Atu3999 -0.7 -1.9 dithiobiotin synthetase compare
Atu6098 -0.7 -0.5 transcriptional regulator, HTH family compare
Atu3593 -0.7 -3.9 hypothetical protein compare
Atu1470 -0.7 -0.8 Camphor resistance protein compare
Atu1028 -0.7 -1.0 hypothetical protein compare
Atu2304 -0.7 -4.1 bacteroid development protein compare
Atu1077 -0.7 -1.4 DNA repair protein compare
Atu0025 -0.7 -1.5 hypothetical protein compare
Atu4896 -0.7 -2.2 acetyltransferase compare
Atu8093 -0.6 -3.7 hypothetical protein compare
Atu0332 -0.6 -3.8 RNA polymerase sigma-54 factor compare
Atu2238 -0.6 -2.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1647 -0.6 -4.0 ABC transporter, membrane spanning protein compare
Atu2772 -0.6 -3.2 Invasion protein A compare
Atu3008 -0.6 -0.9 hypothetical protein compare
Atu2125 -0.6 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu2239 -0.6 -1.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3120 -0.6 -0.6 hypothetical protein compare
Atu3755 -0.6 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2746 -0.6 -1.8 hypothetical protein compare
Atu0029 -0.6 -2.5 S-adenosylhomocysteine hydrolase compare
Atu4214 -0.6 -3.2 cold shock protein compare
Atu3022 -0.6 -3.5 sugar ABC transporter permease compare
Atu0953 -0.6 -0.7 hypothetical protein compare
Atu1527 -0.6 -1.7 nitrogen fixation protein FixS compare
Atu0590 -0.6 -3.9 transcriptional regulator repressor compare
Atu1354 -0.6 -0.7 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1850 -0.6 -2.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3443 -0.6 -1.9 hypothetical protein compare
Atu3017 -0.6 -1.0 phosphoglyceromutase compare
Atu3468 -0.6 -0.7 hypothetical protein compare
Atu2795 -0.6 -2.8 cobalamin biosynthetic protein compare
Atu0973 -0.6 -3.3 cycH protein compare
Atu4613 -0.6 -4.3 glycosyltransferase compare
Atu1474 -0.6 -2.0 hypothetical protein compare
Atu0038 -0.6 -2.0 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0437 -0.6 -2.5 hypothetical protein compare
Atu4878 -0.6 -2.5 hypothetical protein compare
Atu2807 -0.6 -2.8 cob(I)alamin adenosyltransferase compare
Atu0185 -0.6 -2.7 methylglyoxal synthase compare
Atu4614 -0.6 -3.3 glycosyltransferase compare
Atu0149 -0.6 -1.9 enoyl-(acyl-carrier-protein) reductase compare
Atu2073 -0.6 -2.1 membrane protein compare
Atu0093 -0.6 -1.9 Recombination protein compare
Atu4615 -0.6 -3.4 glucose-1-phosphate thymidylyltransferase compare
Atu3472 -0.6 -2.1 2-oxoisovalerate dehydrogenase subunit beta compare
Atu2800 -0.6 -1.1 precorrin-3B C17-methyltransferase compare
Atu4458 -0.6 -1.2 hypothetical protein compare
Atu4077 -0.6 -3.7 glycogen branching protein compare
Atu0043 -0.6 -1.3 imidazoleglycerol-phosphate dehydratase compare
Atu1621 -0.5 -3.0 hypothetical protein compare
Atu2127 -0.5 -2.9 L-carnitine dehydratase compare
Atu0837 -0.5 -2.8 transcriptional regulator, MarR family compare
Atu4870 -0.5 -3.0 NADP-dependent quinone oxidoreductase compare
Atu3511 -0.5 -2.4 glutaredoxin compare
Atu8055 -0.5 -1.6 hypothetical protein compare
Atu6057 -0.5 -2.9 ABC transporter, membrane spanning protein (nitrate/sulfonates) compare


Specific Phenotypes

For 3 genes in this experiment

For stress Cephalothin sodium salt in Agrobacterium fabrum C58

For stress Cephalothin sodium salt across organisms