Experiment set4IT063 for Pseudomonas simiae WCS417
LB with 1-ethyl-3-methylimidazolium chloride 200 mM
Group: stressMedia: LB + 1-ethyl-3-methylimidazolium chloride (200 mM)
Culturing: fluoroDangl_ML3, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Mark on 3/2/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1167 E3,E4
Specific Phenotypes
For 6 genes in this experiment
For stress 1-ethyl-3-methylimidazolium chloride in Pseudomonas simiae WCS417
For stress 1-ethyl-3-methylimidazolium chloride across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| ATP-dependent RNA helicases, bacterial | 1 |
| Inositol catabolism | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| myo-inositol degradation II | 5 | 1 | 1 |
| myo-inositol degradation I | 7 | 7 | 1 |
| myo-, chiro- and scyllo-inositol degradation | 10 | 7 | 1 |
| streptomycin biosynthesis | 18 | 3 | 1 |