Experiment set4IT063 for Agrobacterium fabrum C58

Compare to:

R2A with Fusidic acid sodium salt 0.002 mM

200 most important genes:

  gene name fitness t score description  
Atu4217 -3.7 -3.5 TetR family transcriptional regulator compare
Atu2710 -3.4 -9.2 hypothetical protein compare
Atu2368 -3.0 -2.4 hypothetical protein compare
Atu1307 -2.7 -4.6 dihydroorotase compare
Atu0399 -2.5 -5.6 dihydroorotase compare
Atu1687 -2.5 -7.2 anthranilate phosphoribosyltransferase compare
Atu0017 -2.5 -2.8 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1446 -2.5 -4.0 two component response regulator compare
Atu3469 -2.2 -3.0 phosphoglyceromutase compare
Atu1308 -2.2 -5.9 aspartate carbamoyl transferase catalytic subunit compare
Atu0769 -2.1 -2.0 protoheme IX farnesyltransferase compare
Atu2207 -2.1 -4.5 two component sensor kinase compare
Atu0103 -2.1 -7.2 penicillin-binding protein compare
Atu4072 -2.1 -2.1 nodulation protein N compare
Atu0400 -2.0 -4.4 orotate phosphoribosyltransferase compare
Atu0777 -2.0 -1.4 hypothetical protein compare
Atu2289 -1.8 -10.2 anthranilate synthase component I and II compare
Atu3008 -1.8 -2.0 hypothetical protein compare
Atu0971 -1.8 -5.8 two component sensor kinase compare
Atu0141 -1.8 -2.0 cytochrome O ubiquinol oxidase subunit I compare
Atu0972 -1.7 -7.8 lipA protein compare
Atu6098 -1.7 -1.0 transcriptional regulator, HTH family compare
Atu0723 -1.7 -2.8 FAD dependent oxidoreductase compare
Atu4451 -1.6 -7.1 mannitol 2-dehydrogenase compare
Atu0486 -1.6 -3.6 dihydroorotate dehydrogenase compare
Atu0184 -1.6 -2.5 glucokinase compare
Atu0298 -1.5 -5.1 orotidine 5 compare
Atu1891 -1.5 -4.1 cobalamin biosynthesis protein compare
Atu2113 -1.5 -2.1 N-acetylmuramoyl-L-alanine amidase compare
Atu2554 -1.5 -2.2 lysyl-tRNA synthetase compare
Atu2728 -1.5 -4.2 beta (1-->2) glucan export ATP-binding protein compare
Atu4773 -1.5 -2.4 two component response regulator compare
Atu0346 -1.5 -2.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3598 -1.4 -1.7 thiol:disulfide interchange protein compare
Atu3763 -1.4 -2.1 hypothetical protein compare
Atu0434 -1.4 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1030 -1.4 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1028 -1.3 -3.2 hypothetical protein compare
Atu1855 -1.3 -6.0 MFS permease conserved
Atu2800 -1.3 -3.2 precorrin-3B C17-methyltransferase compare
Atu4317 -1.3 -2.6 TetR family transcriptional regulator compare
Atu3755 -1.3 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0190 -1.3 -5.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0188 -1.2 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1774 -1.2 -6.0 ABC transporter, substrate binding protein (peptide) compare
Atu2205 -1.2 -3.1 transcriptional regulator, MarR family compare
Atu0086 -1.2 -1.3 ribosome-binding factor A compare
Atu2662 -1.2 -1.8 acetyltransferase compare
Atu4890 -1.2 -1.9 IS426 transposase compare
Atu0189 -1.1 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0565 -1.1 -4.4 hypothetical protein compare
Atu3012 -1.1 -1.9 hypothetical protein compare
Atu1355 -1.1 -4.7 hypothetical protein compare
Atu2464 -1.1 -2.4 formyltetrahydrofolate deformylase compare
Atu0041 -1.1 -1.0 glutamine amidotransferase compare
Atu0535 -1.1 -4.4 hypothetical protein compare
Atu4166 -1.1 -2.4 UDP-glucose 4-epimerase compare
Atu0039 -1.1 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu0025 -1.1 -2.1 hypothetical protein compare
Atu2802 -1.1 -5.6 precorrin-8X methylmutase compare
Atu3014 -1.1 -2.7 hypothetical protein compare
Atu2805 -1.1 -3.0 cobalamin synthesis protein compare
Atu1075 -1.1 -5.5 amidophosphoribosyltransferase compare
Atu3353 -1.0 -6.9 mannose-1-phosphate guanylyltransferase compare
Atu1688 -1.0 -3.1 indole-3-glycerol-phosphate synthase compare
Atu3754 -1.0 -3.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3031 -1.0 -1.6 hypothetical protein compare
Atu2067 -1.0 -1.2 hypothetical protein compare
Atu4418 -0.9 -3.5 glutaryl-CoA dehydrogenase compare
Atu2183 -0.9 -6.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0470 -0.9 -2.3 hypothetical protein compare
Atu2807 -0.9 -4.5 cob(I)alamin adenosyltransferase compare
Atu2804 -0.9 -5.4 cobaltochelatase subunit compare
Atu1140 -0.9 -3.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu2616 -0.9 -6.2 hypothetical protein compare
Atu0894 -0.9 -2.2 ABC transporter, membrane spanning protein compare
Atu0795 -0.9 -2.1 hypothetical protein compare
Atu2439 -0.9 -0.8 hypothetical protein compare
Atu4614 -0.9 -4.7 glycosyltransferase compare
Atu1844 -0.9 -1.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2484 -0.9 -1.7 hypothetical protein compare
Atu1686 -0.9 -5.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0471 -0.9 -1.8 hypothetical protein compare
Atu8126 -0.9 -4.6 putative phage tail protein I compare
Atu2684 -0.9 -1.1 hypothetical protein compare
Atu2799 -0.9 -3.0 precorrin-6x reductase compare
Atu4711 -0.9 -3.2 two component sensor kinase compare
Atu2125 -0.8 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu3727 -0.8 -3.1 hypothetical protein compare
Atu1714 -0.8 -1.3 exonuclease III compare
Atu0361 -0.8 -1.9 transcriptional regulator compare
Atu4617 -0.8 -4.3 dTDP-D-glucose-4,6-dehydratase compare
Atu4897 -0.8 -1.7 hypothetical protein compare
Atu2796 -0.8 -2.4 precorrin-4 C11-methyltransferase compare
Atu5485 -0.8 -1.1 hypothetical protein compare
Atu1110 -0.8 -1.6 cytosol aminopeptidase compare
Atu2798 -0.8 -2.2 precorrin-6y methyltransferase compare
Atu3017 -0.8 -1.4 phosphoglyceromutase compare
Atu3707 -0.8 -2.5 phosphoserine aminotransferase compare
Atu2406 -0.8 -1.5 hypothetical protein compare
Atu0836 -0.8 -1.6 Glutathione-S-transferase compare
Atu1213 -0.8 -1.9 hypothetical protein compare
Atu1644 -0.8 -1.9 hypothetical protein compare
Atu0115 -0.8 -0.8 hypothetical protein compare
Atu1629 -0.7 -1.2 transcriptional regulator, ArsR family compare
Atu2809 -0.7 -3.7 cobalamin biosynthesis protein compare
Atu3311 -0.7 -5.2 phosphomannose isomerase compare
Atu2367 -0.7 -2.1 hypothetical protein compare
Atu2550 -0.7 -5.6 RND multidrug efflux membrane permease compare
Atu1685 -0.7 -0.8 hypothetical protein compare
Atu0510 -0.7 -4.9 pH adaption potassium efflux system protein compare
Atu0876 -0.7 -1.5 superoxide dismutase compare
Atu2238 -0.7 -3.7 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4618 -0.7 -5.0 dTDP-rhamnose-3,5-epimerase compare
Atu8118 -0.7 -3.6 putative universal stress protein compare
Atu3392 -0.7 -2.3 methyltransferase compare
Atu1845 -0.7 -1.3 phosphoribosylformylglycinamidine synthase I compare
Atu0647 -0.7 -2.3 phosphoribosylamine--glycine ligase compare
Atu1517 -0.7 -2.0 hypothetical protein compare
Atu1021 -0.7 -1.9 outer membrane protein compare
Atu0031 -0.7 -1.2 PTS system, IIA component compare
Atu3759 -0.7 -1.2 hypothetical protein compare
Atu4887 -0.7 -2.6 hypothetical protein compare
Atu4873 -0.7 -3.1 TetR family transcriptional regulator compare
Atu2650 -0.7 -4.2 glycerol-3-phosphate dehydrogenase compare
Atu0977 -0.7 -1.8 serine protease DO-like protease compare
Atu3712 -0.7 -1.3 hypothetical protein compare
Atu2640 -0.7 -2.3 hypothetical protein compare
Atu4108 -0.7 -2.7 ribonuclease D compare
Atu0496 -0.7 -1.9 hypothetical protein compare
Atu1588 -0.7 -3.5 homoserine dehydrogenase compare
Atu1647 -0.7 -3.5 ABC transporter, membrane spanning protein compare
Atu0097 -0.7 -3.6 hypothetical protein compare
Atu1646 -0.7 -3.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu3634 -0.7 -3.6 penicillin-binding protein dacf precursor compare
Atu2200 -0.7 -1.5 cold shock protein compare
Atu1542 -0.6 -2.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0269 -0.6 -2.6 exodeoxyribonuclease VII large subunit compare
Atu4144 -0.6 -0.9 hypothetical protein compare
Atu2808 -0.6 -3.3 cobyric acid synthase compare
Atu2504 -0.6 -3.0 transcriptional regulator, GntR family compare
Atu0062 -0.6 -3.7 transcriptional regulator, ROK family compare
Atu3739 -0.6 -1.4 phosphoglycerate kinase compare
Atu4406 -0.6 -1.4 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu8018 -0.6 -0.6 hypothetical protein compare
Atu4075 -0.6 -2.7 glycogen synthase compare
Atu2555 -0.6 -1.9 L-lysine 2,3-aminomutase compare
Atu1373 -0.6 -3.4 hypothetical protein compare
Atu3026 -0.6 -3.1 short chain dehydrogenase compare
Atu0925 -0.6 -1.4 hypothetical protein compare
Atu1628 -0.6 -1.4 hypothetical protein compare
Atu0093 -0.6 -2.0 Recombination protein compare
Atu3496 -0.6 -1.6 hypothetical protein compare
Atu3122 -0.6 -1.6 cold shock protein compare
Atu3750 -0.6 -1.0 thiamine-phosphate pyrophosphorylase compare
Atu1466 -0.6 -0.9 hypothetical protein compare
Atu3886 -0.6 -4.1 lysophospholipase compare
Atu4567 -0.6 -3.3 ROK family transcriptional regulator compare
Atu5026 -0.6 -2.6 hypothetical protein compare
Atu2793 -0.6 -2.0 cobyrinic acid a,c-diamide synthase compare
Atu8131 -0.6 -4.1 pH adaption potassium efflux system protein compare
Atu4879 -0.6 -2.5 hypothetical protein compare
Atu1634 -0.6 -1.3 hypothetical protein compare
Atu3429 -0.6 -1.0 hypothetical protein compare
Atu3593 -0.6 -4.1 hypothetical protein compare
Atu4615 -0.6 -3.8 glucose-1-phosphate thymidylyltransferase compare
Atu1620 -0.6 -3.6 triosephosphate isomerase compare
Atu0943 -0.6 -1.3 hypothetical protein compare
Atu0029 -0.6 -2.2 S-adenosylhomocysteine hydrolase compare
Atu2615 -0.6 -3.6 hypothetical protein compare
Atu0953 -0.6 -0.7 hypothetical protein compare
Atu2379 -0.6 -3.7 phosphomannomutase compare
Atu1427 -0.6 -1.6 hypothetical protein compare
Atu2788 -0.6 -2.1 citrate lyase, beta subunit compare
Atu1484 -0.6 -1.6 transcriptional regulator compare
Atu0931 -0.6 -3.6 penicillin binding protein compare
Atu0419 -0.6 -0.9 two component sensor kinase compare
Atu6189 -0.6 -0.7 protein secretion chaperone compare
Atu4841 -0.6 -3.1 DeoR family transcriptional regulator compare
Atu0153 -0.6 -2.1 transcriptional regulator, Fur family compare
Atu2040 -0.6 -2.3 phosphoserine phosphatase compare
Atu0001 -0.6 -2.9 hypothetical protein compare
Atu4882 -0.6 -1.0 hypothetical protein compare
Atu2551 -0.5 -4.2 RND multidrug efflux transporter compare
Atu0598 -0.5 -2.9 phosphogluconate dehydratase compare
Atu2831 -0.5 -1.9 glucose inhibited division protein A compare
Atu2148 -0.5 -2.4 ABC transporter, membrane spanning protein compare
Atu4366 -0.5 -1.5 short chain dehydrogenase compare
Atu5146 -0.5 -1.3 hypothetical protein compare
Atu2812 -0.5 -1.9 hypothetical protein compare
Atu4864 -0.5 -2.4 MarR family transcriptional regulator compare
Atu2036 -0.5 -3.6 acetolactate synthase III, large subunit compare
Atu1359 -0.5 -0.6 dnaK deletion suppressor protein compare
Atu6114 -0.5 -1.5 hypothetical protein compare
Atu4232 -0.5 -2.6 GntR family transcriptional regulator compare
Atu3394 -0.5 -1.7 iron ABC transporter ATPase compare
Atu3013 -0.5 -1.9 hypothetical protein compare
Atu2801 -0.5 -2.2 precorrin-2 C20 methyltransferase compare
Atu1141 -0.5 -2.2 Phosphoribosylglycinamide synthetase compare
Atu2083 -0.5 -1.8 DNA repair protein RecN compare


Specific Phenotypes

For 2 genes in this experiment

For stress Fusidic acid sodium salt in Agrobacterium fabrum C58

For stress Fusidic acid sodium salt across organisms