Experiment set4IT062 for Agrobacterium fabrum C58

Compare to:

R2A with Bacitracin 0.6 mM

200 most important genes:

  gene name fitness t score description  
Atu0269 -5.0 -4.8 exodeoxyribonuclease VII large subunit compare
Atu2083 -4.6 -5.4 DNA repair protein RecN compare
Atu2710 -4.0 -11.3 hypothetical protein compare
Atu1874 -3.9 -2.7 RecA protein compare
Atu2057 -3.9 -2.7 DNA helicase II compare
Atu4217 -3.8 -3.2 TetR family transcriptional regulator compare
Atu1077 -3.4 -3.3 DNA repair protein compare
Atu0103 -3.1 -7.8 penicillin-binding protein compare
Atu3469 -2.9 -3.4 phosphoglyceromutase compare
Atu0972 -2.8 -5.9 lipA protein compare
Atu8087 -2.7 -1.8 putative peptidoglycan binding protein compare
Atu3634 -2.6 -6.6 penicillin-binding protein dacf precursor compare
Atu0184 -2.3 -3.9 glucokinase compare
Atu3763 -2.1 -2.8 hypothetical protein compare
Atu2583 -2.0 -9.4 glycosyltransferase compare
Atu2551 -1.9 -11.8 RND multidrug efflux transporter compare
Atu2577 -1.9 -11.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu2550 -1.9 -10.7 RND multidrug efflux membrane permease compare
Atu0421 -1.9 -1.9 ABC transporter, membrane spanning protein compare
Atu4149 -1.9 -7.9 UDP-glucose 6-dehydrogenase compare
Atu0769 -1.8 -2.4 protoheme IX farnesyltransferase compare
Atu2592 -1.7 -5.1 hypothetical protein compare
Atu0141 -1.7 -2.2 cytochrome O ubiquinol oxidase subunit I compare
Atu0030 -1.6 -1.8 phosphocarrier protein HPr compare
Atu2590 -1.6 -6.1 hypothetical protein compare
Atu0598 -1.6 -7.8 phosphogluconate dehydratase compare
Atu8054 -1.6 -1.0 hypothetical protein compare
Atu2207 -1.6 -4.3 two component sensor kinase compare
Atu5045 -1.6 -2.3 hypothetical protein compare
Atu2439 -1.6 -1.3 hypothetical protein compare
Atu4108 -1.5 -8.8 ribonuclease D compare
Atu1380 -1.5 -5.0 zinc metallopeptidase compare
Atu1110 -1.4 -2.3 cytosol aminopeptidase compare
Atu0189 -1.4 -3.5 ABC transporter, membrane spanning protein (peptide) compare
Atu0190 -1.4 -6.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu2728 -1.4 -3.5 beta (1-->2) glucan export ATP-binding protein compare
Atu2113 -1.4 -3.1 N-acetylmuramoyl-L-alanine amidase compare
Atu0188 -1.4 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu2582 -1.4 -4.1 UDP-glucose/GDP-mannose dehydrogenase compare
Atu1701 -1.4 -2.8 protein-L-isoaspartate O-methyltransferase compare
Atu0361 -1.4 -2.6 transcriptional regulator compare
Atu2585 -1.4 -3.1 hypothetical protein compare
Atu1163 -1.3 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2591 -1.3 -4.0 glucosyltransferase compare
Atu6098 -1.3 -0.9 transcriptional regulator, HTH family compare
Atu1030 -1.2 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2692 -1.2 -3.4 intracellular septation protein compare
Atu2200 -1.2 -2.4 cold shock protein compare
Atu1149 -1.2 -1.4 adenylate cyclase compare
Atu2482 -1.2 -7.5 HlyD family secretion protein compare
Atu2584 -1.2 -3.2 hypothetical protein compare
Atu8025 -1.2 -1.4 hypothetical protein compare
Atu8180 -1.1 -5.3 hypothetical protein compare
Atu2640 -1.1 -2.1 hypothetical protein compare
Atu1855 -1.1 -5.4 MFS permease compare
Atu1566 -1.1 -1.3 hypothetical protein compare
Atu1028 -1.1 -2.7 hypothetical protein compare
Atu0346 -1.1 -1.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu3759 -1.1 -1.5 hypothetical protein compare
Atu0039 -1.1 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu1850 -1.1 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu5164 -1.0 -1.0 type IV secretion protein AvhB3 compare
Atu1644 -1.0 -2.1 hypothetical protein compare
Atu1845 -1.0 -2.9 phosphoribosylformylglycinamidine synthase I compare
Atu1774 -1.0 -6.0 ABC transporter, substrate binding protein (peptide) compare
Atu0943 -1.0 -1.4 hypothetical protein compare
Atu3461 -1.0 -2.1 GntR family transcriptional regulator compare
Atu8161 -1.0 -1.3 hypothetical protein compare
Atu2798 -1.0 -3.4 precorrin-6y methyltransferase compare
Atu8018 -1.0 -0.8 hypothetical protein compare
Atu0566 -1.0 -1.8 hypothetical protein compare
Atu0399 -1.0 -4.4 dihydroorotase compare
Atu1844 -0.9 -2.0 Phosphoribosylformylglycinamidine synthetase compare
Atu4072 -0.9 -1.0 nodulation protein N compare
Atu4148 -0.9 -2.6 UDP-glucuronic acid epimerase compare
Atu4567 -0.9 -4.5 ROK family transcriptional regulator compare
Atu0721 -0.9 -4.8 hypothetical protein compare
Atu0025 -0.9 -1.5 hypothetical protein compare
Atu2480 -0.9 -4.6 transcriptional regulator, LysR family compare
Atu2483 -0.9 -6.6 AcrB/AcrD/AcrF family protein compare
Atu1646 -0.9 -4.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu3387 -0.9 -2.3 sigma factor compare
Atu2183 -0.8 -4.9 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0354 -0.8 -1.7 ferric uptake regulator compare
Atu0031 -0.8 -1.3 PTS system, IIA component compare
Atu0762 -0.8 -2.2 hypothetical protein compare
Atu1619 -0.8 -1.5 protein-export membrane protein SECG compare
Atu1714 -0.8 -1.2 exonuclease III compare
Atu1447 -0.8 -2.2 two component sensor kinase compare
Atu1405 -0.8 -3.5 transcriptional regulator, GntR family compare
Atu0883 -0.8 -1.4 hypothetical protein compare
Atu2127 -0.8 -4.3 L-carnitine dehydratase compare
Atu0953 -0.8 -1.2 hypothetical protein compare
Atu3353 -0.8 -4.9 mannose-1-phosphate guanylyltransferase compare
Atu1189 -0.8 -2.1 hypothetical protein compare
Atu1891 -0.8 -2.6 cobalamin biosynthesis protein compare
Atu1846 -0.8 -1.2 hypothetical protein compare
Atu8138 -0.8 -1.2 hypothetical protein compare
Atu3429 -0.8 -1.2 hypothetical protein compare
Atu1778 -0.8 -5.5 transcription-repair coupling factor compare
Atu5107 -0.8 -2.1 hypothetical protein compare
Atu2807 -0.7 -3.4 cob(I)alamin adenosyltransferase compare
Atu1780 -0.7 -3.9 ATP-dependent DNA helicase compare
Atu4711 -0.7 -3.7 two component sensor kinase compare
Atu4514 -0.7 -1.4 RpiR family transcriptional regulator compare
Atu2802 -0.7 -4.2 precorrin-8X methylmutase compare
Atu0041 -0.7 -0.7 glutamine amidotransferase compare
Atu1647 -0.7 -4.6 ABC transporter, membrane spanning protein compare
Atu1291 -0.7 -1.5 hypothetical protein compare
Atu0846 -0.7 -1.4 transcriptional regulator, MarR family compare
Atu0726 -0.7 -4.0 ring hydroxylating dioxygenase, alpha-subunit compare
Atu0422 -0.7 -0.7 ABC transporter, membrane spanning protein compare
Atu4418 -0.7 -2.4 glutaryl-CoA dehydrogenase compare
Atu0920 -0.7 -1.8 hypothetical protein compare
Atu2058 -0.7 -1.6 hypothetical protein compare
Atu8035 -0.7 -1.3 hypothetical protein compare
Atu3697 -0.7 -3.2 ATP-dependent protease LA 2 compare
Atu0784 -0.7 -2.5 hypothetical protein compare
Atu2001 -0.7 -3.7 excinuclease ABC subunit B compare
Atu1513 -0.7 -2.7 ABC excinuclease subunit A compare
Atu0153 -0.7 -2.4 transcriptional regulator, Fur family compare
Atu1546 -0.7 -2.8 transcriptional regulator, MerR family compare
Atu2650 -0.7 -3.9 glycerol-3-phosphate dehydrogenase compare
Atu0499 -0.7 -3.7 hypothetical protein compare
Atu0585 -0.7 -1.9 hypothetical protein compare
Atu2796 -0.6 -2.6 precorrin-4 C11-methyltransferase compare
Atu0894 -0.6 -1.4 ABC transporter, membrane spanning protein compare
Atu3798 -0.6 -2.9 TetR family transcriptional regulator compare
Atu2659 -0.6 -3.3 MFS permease compare
Atu0983 -0.6 -1.5 hypothetical protein compare
Atu4530 -0.6 -3.2 TetR family transcriptional regulator compare
Atu2059 -0.6 -2.9 transcriptional regulator, TetR family compare
Atu2362 -0.6 -3.5 S-methyltransferase compare
Atu1801 -0.6 -2.1 hypothetical protein compare
Atu3772 -0.6 -3.6 hypothetical protein compare
Atu0339 -0.6 -1.9 hypothetical protein compare
Atu3030 -0.6 -2.7 hypothetical protein compare
Atu1355 -0.6 -2.6 hypothetical protein compare
Atu6165 -0.6 -0.7 hypothetical protein compare
Atu3115 -0.6 -3.6 TetR family transcriptional regulator compare
Atu2267 -0.6 -1.6 hypothetical protein compare
Atu2694 -0.6 -1.0 hypothetical protein compare
Atu0781 -0.6 -2.0 hypothetical protein compare
Atu0211 -0.6 -3.2 hypothetical protein compare
Atu5437 -0.6 -1.8 hypothetical protein compare
Atu4803 -0.6 -3.0 two component response regulator compare
Atu2808 -0.6 -2.6 cobyric acid synthase compare
Atu4214 -0.6 -1.3 cold shock protein compare
Atu2803 -0.6 -2.2 Cobalamin biosynthesis associated protein compare
Atu3496 -0.6 -1.7 hypothetical protein compare
Atu0925 -0.6 -1.7 hypothetical protein compare
Atu2788 -0.6 -3.0 citrate lyase, beta subunit compare
Atu3483 -0.6 -2.3 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2249 -0.6 -0.6 hypothetical protein compare
Atu2793 -0.6 -2.2 cobyrinic acid a,c-diamide synthase compare
Atu2043 -0.6 -2.8 htrA family protein compare
Atu0727 -0.6 -4.3 ferredoxin I compare
Atu4470 -0.6 -3.2 iron ABC transporter ATPase compare
Atu0496 -0.6 -1.6 hypothetical protein compare
Atu4873 -0.6 -2.7 TetR family transcriptional regulator compare
Atu0357 -0.6 -2.8 phosphate starvation inducible protein compare
Atu3608 -0.6 -1.9 hypothetical protein compare
Atu1129 -0.6 -2.7 excinuclease ABC chain C compare
Atu3485 -0.6 -3.1 short chain dehydrogenase compare
Atu4427 -0.6 -2.2 replicative DNA helicase compare
Atu3775 -0.6 -0.7 hypothetical protein compare
Atu2187 -0.6 -2.5 transcriptional regulator, ArsR family compare
Atu4342 -0.6 -1.4 hypothetical protein compare
Atu4137 -0.6 -2.4 hypothetical protein compare
Atu4028 -0.6 -2.0 recombination regulator RecX compare
Atu4854 -0.6 -1.7 hypothetical protein compare
Atu1587 -0.6 -2.5 hypothetical protein compare
Atu8063 -0.6 -1.6 hypothetical protein compare
Atu5486 -0.6 -2.6 hypothetical protein compare
Atu0298 -0.6 -2.3 orotidine 5 compare
Atu2800 -0.6 -0.9 precorrin-3B C17-methyltransferase compare
Atu2615 -0.6 -3.5 hypothetical protein compare
Atu8019 -0.6 -1.5 hypothetical protein compare
Atu6039 -0.6 -1.7 conjugal transfer protein compare
Atu3144 -0.6 -2.4 GntR family transcriptional regulator compare
Atu3472 -0.5 -2.2 2-oxoisovalerate dehydrogenase subunit beta compare
Atu0220 -0.5 -1.7 components of type IV pilus compare
Atu2795 -0.5 -1.8 cobalamin biosynthetic protein compare
Atu1364 -0.5 -2.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0647 -0.5 -2.3 phosphoribosylamine--glycine ligase compare
Atu0486 -0.5 -2.3 dihydroorotate dehydrogenase compare
Atu3739 -0.5 -0.7 phosphoglycerate kinase compare
Atu4773 -0.5 -0.9 two component response regulator compare
Atu8185 -0.5 -2.2 hypothetical protein compare
Atu3045 -0.5 -1.9 hypothetical protein compare
Atu0464 -0.5 -2.5 hypothetical protein compare
Atu3884 -0.5 -2.9 hypothetical protein compare
Atu2304 -0.5 -3.1 bacteroid development protein compare
Atu0470 -0.5 -1.4 hypothetical protein compare
Atu4613 -0.5 -4.5 glycosyltransferase compare
Atu4617 -0.5 -3.3 dTDP-D-glucose-4,6-dehydratase compare
Atu4029 -0.5 -2.2 gluconolactonase compare
Atu1640 -0.5 -1.6 hypothetical protein compare
Atu3730 -0.5 -0.7 hypothetical protein compare
Atu3311 -0.5 -4.0 phosphomannose isomerase compare


Specific Phenotypes

For 10 genes in this experiment

For stress Bacitracin in Agrobacterium fabrum C58

For stress Bacitracin across organisms