| | gene | name | fitness | t score | description | |
|---|
| b3863 | polA | -3.8 | -2.6 | DNA polymerase I (NCBI) | compare |
| b2330 | yfcB | -3.7 | -4.3 | putative adenine-specific methylase (VIMSS) | compare |
| b2699 | recA | -2.9 | -3.9 | recombinase A (NCBI) | compare |
| b0630 | lipB | -2.9 | -3.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3725 | pstB | -2.8 | -4.7 | phosphate transporter subunit (NCBI) | compare |
| b3183 | obgE | -2.6 | -2.9 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4375 | prfC | -2.5 | -10.5 | peptide chain release factor 3 (NCBI) | compare |
| b0118 | acnB | -2.5 | -5.8 | aconitate hydratase (NCBI) | compare |
| b2820 | recB | -2.4 | -5.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2894 | xerD | -2.3 | -3.1 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3290 | trkA | -2.1 | -5.6 | potassium transporter peripheral membrane component (NCBI) | compare |
| b2285 | nuoE | -2.1 | -4.0 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3162 | deaD | -2.0 | -6.9 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0888 | trxB | -1.9 | -4.0 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2569 | lepA | -1.8 | -6.5 | GTP-binding protein LepA (NCBI) | compare |
| b4177 | purA | -1.8 | -4.6 | adenylosuccinate synthetase (NCBI) | compare |
| b0200 | gmhB | -1.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b2576 | srmB | -1.6 | -4.9 | ATP-dependent RNA helicase (NCBI) | compare |
| b4699 | fnrS | -1.6 | -1.9 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b2528 | iscA | -1.6 | -2.2 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b0726 | sucA | -1.6 | -4.4 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2279 | nuoK | -1.5 | -2.5 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4585 | sroB | -1.5 | -1.8 | Novel sRNA, function unknown (RefSeq) | compare |
| b3636 | rpmG | -1.5 | -2.2 | 50S ribosomal protein L33 (NCBI) | compare |
| b2935 | tktA | -1.4 | -4.0 | transketolase 1, thiamin-binding (NCBI) | compare |
| b2281 | nuoI | -1.4 | -3.2 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2822 | recC | -1.3 | -4.7 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b1292 | sapC | -1.3 | -3.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0738 | tolR | -1.3 | -4.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0949 | uup | -1.3 | -7.9 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b4155 | yjeA | -1.3 | -1.9 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b3390 | aroK | -1.2 | -2.8 | shikimate kinase I (NCBI) | compare |
| b3463 | ftsE | -1.2 | -5.0 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1293 | sapB | -1.2 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3728 | pstS | -1.2 | -4.4 | phosphate transporter subunit (NCBI) | compare |
| b0737 | tolQ | -1.2 | -3.8 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3977 | tyrU | -1.2 | -1.5 | tRNA-Tyr (NCBI) | compare |
| b1290 | sapF | -1.1 | -2.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2620 | smpB | -1.1 | -2.0 | SsrA-binding protein (NCBI) | compare |
| b3741 | gidA | -1.1 | -6.9 | glucose-inhibited division protein A (NCBI) | compare |
| b2276 | nuoN | -1.1 | -3.7 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b3426 | glpD | -1.1 | -5.7 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b0890 | ftsK | -1.1 | -6.8 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1777 | b1777 | -1.1 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b3649 | rpoZ | -1.0 | -3.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3198 | kdsC | -1.0 | -2.3 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b2567 | rnc | -1.0 | -1.8 | ribonuclease III (NCBI) | compare |
| b3871 | bipA | -1.0 | -7.0 | GTP-binding protein (NCBI) | compare |
| b3237 | argR | -1.0 | -4.6 | arginine repressor (NCBI) | compare |
| b1291 | sapD | -1.0 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0722 | sdhD | -1.0 | -4.1 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b2283 | nuoG | -1.0 | -5.7 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b4441 | glmY | -1.0 | -1.8 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b3619 | rfaD | -1.0 | -3.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b2277 | nuoM | -1.0 | -4.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b1286 | rnb | -1.0 | -3.0 | exoribonuclease II (NCBI) | compare |
| b2830 | nudH | -1.0 | -1.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b3778 | rep | -1.0 | -6.1 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2058 | wcaB | -1.0 | -1.3 | predicted acyl transferase (NCBI) | compare |
| b4577 | sgrS | -1.0 | -2.2 | small antisense RNA (NCBI) | compare |
| b3082 | ygjM | -1.0 | -1.5 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2278 | nuoL | -1.0 | -6.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3811 | xerC | -0.9 | -2.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b4418 | sraB | -0.9 | -1.5 | unknown RNA (NCBI) | compare |
| b1848 | yebG | -0.9 | -1.6 | conserved protein regulated by LexA (NCBI) | compare |
| b4234 | yjgA | -0.9 | -3.0 | hypothetical protein (NCBI) | compare |
| b2286 | nuoC | -0.9 | -4.6 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3616 | tdh | -0.9 | -3.9 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b2363 | yfdT | -0.9 | -1.8 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b4172 | hfq | -0.9 | -1.4 | RNA-binding protein Hfq (NCBI) | compare |
| b3621 | rfaC | -0.9 | -4.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2318 | truA | -0.9 | -3.6 | tRNA pseudouridine synthase A (NCBI) | compare |
| b0724 | sdhB | -0.9 | -4.7 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b2287 | nuoB | -0.9 | -3.4 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0053 | surA | -0.9 | -4.2 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b0049 | apaH | -0.9 | -4.2 | diadenosinetetraphosphatase (NCBI) | compare |
| b3386 | rpe | -0.9 | -1.7 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2518 | ndk | -0.9 | -2.6 | nucleoside diphosphate kinase (NCBI) | compare |
| b2282 | nuoH | -0.9 | -2.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0114 | aceE | -0.9 | -2.3 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b2948 | yqgE | -0.9 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0088 | murD | -0.8 | -1.8 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b2284 | nuoF | -0.8 | -4.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4163 | glyV | -0.8 | -1.8 | tRNA-Gly (NCBI) | compare |
| b0721 | sdhC | -0.8 | -3.8 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b0928 | aspC | -0.8 | -4.8 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b0439 | lon | -0.8 | -3.6 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3727 | pstC | -0.8 | -3.9 | phosphate transporter subunit (NCBI) | compare |
| b1236 | galU | -0.8 | -4.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0051 | ksgA | -0.8 | -4.0 | dimethyladenosine transferase (NCBI) | compare |
| b4239 | treC | -0.8 | -3.7 | trehalose-6-P hydrolase (NCBI) | compare |
| b3229 | sspA | -0.8 | -2.7 | stringent starvation protein A (NCBI) | compare |
| b3792 | wzxE | -0.8 | -4.5 | O-antigen translocase (NCBI) | compare |
| b2479 | gcvR | -0.8 | -3.4 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2183 | rsuA | -0.8 | -2.8 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b1551 | b1551 | -0.8 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2017 | yefM | -0.8 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3204 | ptsN | -0.7 | -3.1 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b0222 | lpcA | -0.7 | -2.2 | phosphoheptose isomerase (NCBI) | compare |
| b3035 | tolC | -0.7 | -4.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3169 | nusA | -0.7 | -2.1 | transcription elongation factor NusA (NCBI) | compare |
| b0683 | fur | -0.7 | -1.8 | ferric uptake regulator (NCBI) | compare |
| b1084 | rne | -0.7 | -3.4 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b2325 | yfcL | -0.7 | -3.0 | hypothetical protein (NCBI) | compare |
| b3844 | fre | -0.7 | -3.6 | NAD(P)H-flavin reductase (NCBI) | compare |
| b3164 | pnp | -0.7 | -2.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0357 | yaiN | -0.7 | -2.0 | putative alpha helix chain (VIMSS) | compare |
| b3806 | cyaA | -0.7 | -3.3 | adenylate cyclase (NCBI) | compare |
| b1231 | tyrT | -0.7 | -1.0 | tRNA-Tyr (NCBI) | compare |
| b2259 | pmrD | -0.7 | -1.3 | polymyxin resistance protein B (VIMSS) | compare |
| b4158 | yjeO | -0.7 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b4414 | tff | -0.7 | -1.4 | unknown RNA (NCBI) | compare |
| b3706 | trmE | -0.7 | -4.0 | tRNA modification GTPase (NCBI) | compare |
| b0080 | fruR | -0.7 | -3.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3500 | gor | -0.7 | -1.3 | glutathione reductase (NCBI) | compare |
| b3236 | mdh | -0.7 | -4.3 | malate dehydrogenase (NCBI) | compare |
| b2288 | nuoA | -0.7 | -1.7 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b3238 | yhcN | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b3052 | rfaE | -0.6 | -3.0 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1126 | potA | -0.6 | -3.8 | putrescine/spermidine ABC transporter ATPase protein (NCBI) | compare |
| b2646 | ypjF | -0.6 | -1.4 | CP4-57 prophage; toxin of the YpjF-YfjZ toxin-antitoxin system (NCBI) | compare |
| b1667 | ydhR | -0.6 | -1.0 | hypothetical protein (NCBI) | compare |
| b0471 | ybaB | -0.6 | -2.4 | hypothetical protein (NCBI) | compare |
| b1213 | ychQ | -0.6 | -2.2 | predicted transcriptional regulator (NCBI) | compare |
| b0723 | sdhA | -0.6 | -4.4 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0432 | cyoA | -0.6 | -3.9 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b3462 | ftsX | -0.6 | -2.7 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b2424 | cysU | -0.6 | -1.9 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3341 | rpsG | -0.6 | -1.0 | 30S ribosomal protein S7 (NCBI) | compare |
| b2895 | fldB | -0.6 | -2.0 | flavodoxin 2 (NCBI) | compare |
| b0429 | cyoD | -0.6 | -2.9 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b4139 | aspA | -0.6 | -3.8 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b0428 | cyoE | -0.6 | -3.4 | protoheme IX farnesyltransferase (NCBI) | compare |
| b1480 | sra | -0.6 | -1.7 | 30S ribosomal subunit protein S22 (NCBI) | compare |
| b0001 | thrL | -0.6 | -1.3 | thr operon leader peptide (NCBI) | compare |
| b3761 | trpT | -0.6 | -1.2 | tRNA-Trp (NCBI) | compare |
| b1676 | pykF | -0.6 | -2.6 | pyruvate kinase (NCBI) | compare |
| b1252 | tonB | -0.6 | -2.2 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b2297 | pta | -0.6 | -1.2 | phosphate acetyltransferase (NCBI) | compare |
| b3726 | pstA | -0.6 | -2.8 | phosphate transporter subunit (NCBI) | compare |
| b2444 | yffM | -0.6 | -1.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0340 | cynS | -0.6 | -2.0 | cyanate hydratase (NCBI) | compare |
| b2450 | yffS | -0.6 | -1.5 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b4179 | vacB | -0.6 | -3.5 | putative enzyme (VIMSS) | compare |
| b1677 | lpp | -0.6 | -1.1 | murein lipoprotein (NCBI) | compare |
| b0720 | gltA | -0.6 | -2.8 | citrate synthase (NCBI) | compare |
| b1963 | b1963 | -0.6 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b0113 | pdhR | -0.6 | -2.4 | transcriptional regulator of pyruvate dehydrogenase complex (NCBI) | compare |
| b1989 | asnV | -0.6 | -1.7 | tRNA-Asn (NCBI) | compare |
| b1124 | potC | -0.6 | -3.3 | spermidine/putrescine ABC transporter membrane protein (NCBI) | compare |
| b4208 | cycA | -0.6 | -4.1 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b3398 | yrfF | -0.6 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b4215 | ytfI | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b3613 | yibP | -0.5 | -2.9 | putative membrane protein (VIMSS) | compare |
| b1412 | azoR | -0.5 | -1.7 | acyl carrier protein phosphodiesterase (NCBI) | compare |
| b0191 | yaeJ | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b3631 | rfaG | -0.5 | -4.7 | glucosyltransferase I (NCBI) | compare |
| b3609 | secB | -0.5 | -2.3 | export protein SecB (NCBI) | compare |
| b4679 | yohP | -0.5 | -2.3 | expressed protein (RefSeq) | compare |
| b3807 | cyaY | -0.5 | -3.3 | frataxin-like protein (NCBI) | compare |
| b3617 | kbl | -0.5 | -2.9 | 2-amino-3-ketobutyrate coenzyme A ligase (NCBI) | compare |
| b2531 | iscR | -0.5 | -1.3 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0481 | ybaK | -0.5 | -1.4 | hypothetical protein (NCBI) | compare |
| b2393 | nupC | -0.5 | -3.0 | nucleoside (except guanosine) transporter (NCBI) | compare |
| b3228 | sspB | -0.5 | -1.7 | ClpXP protease specificity-enhancing factor (NCBI) | compare |
| b1390 | paaC | -0.5 | -2.2 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation (NCBI) | compare |
| b4546 | ypeB | -0.5 | -0.9 | hypothetical protein (NCBI) | compare |
| b2906 | visC | -0.5 | -3.0 | hypothetical protein (NCBI) | compare |
| b0728 | sucC | -0.5 | -2.9 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1874 | cutC | -0.5 | -2.4 | copper homeostasis protein (NCBI) | compare |
| b1949 | fliQ | -0.5 | -1.4 | flagellar biosynthesis protein Q (NCBI) | compare |
| b2897 | ygfY | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| b1095 | fabF | -0.5 | -3.1 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3026 | qseC | -0.5 | -2.3 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b2280 | nuoJ | -0.5 | -2.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b2990 | hybG | -0.5 | -1.0 | hydrogenase 2 accessory protein (NCBI) | compare |
| b0825 | mipB | -0.5 | -1.5 | putative transaldolase (VIMSS) | compare |
| b3107 | yhaL | -0.5 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b3289 | rsmB | -0.5 | -3.5 | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent (NCBI) | compare |
| b0729 | sucD | -0.5 | -1.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1062 | pyrC | -0.5 | -2.9 | dihydroorotase (NCBI) | compare |
| b0437 | clpP | -0.5 | -3.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0784 | moaD | -0.5 | -1.3 | molybdopterin synthase, small subunit (NCBI) | compare |
| b2892 | recJ | -0.5 | -3.2 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b0767 | ybhE | -0.5 | -1.5 | 6-phosphogluconolactonase (NCBI) | compare |
| b4042 | dgkA | -0.5 | -1.6 | diacylglycerol kinase (NCBI) | compare |
| b1187 | fadR | -0.5 | -2.2 | fatty acid metabolism regulator (NCBI) | compare |
| b3483 | yhhH | -0.5 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1865 | nudB | -0.5 | -1.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b3935 | priA | -0.5 | -0.8 | primosome assembly protein PriA (NCBI) | compare |
| b1370 | insH-5 | -0.5 | -1.0 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b3071 | yqjI | -0.5 | -2.2 | predicted transcriptional regulator (NCBI) | compare |
| b4255 | yjgD | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1863 | ruvC | -0.5 | -1.9 | Holliday junction resolvase (NCBI) | compare |
| b2498 | upp | -0.5 | -1.8 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3866 | yihI | -0.5 | -2.3 | hypothetical protein (NCBI) | compare |
| b0739 | tolA | -0.5 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2187 | yejL | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b3630 | rfaP | -0.4 | -3.5 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3493 | pitA | -0.4 | -3.0 | phosphate transporter, low-affinity (NCBI) | compare |