Experiment set4IT056 for Agrobacterium fabrum C58

Compare to:

R2A with Cisplatin 0.0016 mM

200 most important genes:

  gene name fitness t score description  
Atu1513 -5.1 -5.0 ABC excinuclease subunit A compare
Atu1129 -5.0 -9.0 excinuclease ABC chain C compare
Atu0093 -4.4 -5.2 Recombination protein compare
Atu1874 -3.9 -2.7 RecA protein compare
Atu2057 -3.9 -2.6 DNA helicase II compare
Atu0495 -3.9 -5.6 hypothetical protein conserved
Atu0073 -3.7 -7.3 recF-like protein conserved
Atu0494 -3.6 -17.7 large atp-dependant helicase-related protein conserved
Atu1039 -3.3 -5.0 DNA repair protein RecO compare
Atu4773 -2.7 -2.7 two component response regulator compare
Atu2001 -2.5 -6.3 excinuclease ABC subunit B compare
Atu4072 -2.5 -1.9 nodulation protein N compare
Atu1687 -2.5 -7.2 anthranilate phosphoribosyltransferase compare
Atu0184 -1.9 -3.1 glucokinase compare
Atu1688 -1.9 -4.1 indole-3-glycerol-phosphate synthase compare
Atu4616 -1.8 -2.0 dTDP-4-dehydrorhamnose reductase compare
Atu0039 -1.8 -2.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0103 -1.8 -9.1 penicillin-binding protein compare
Atu1780 -1.7 -8.7 ATP-dependent DNA helicase conserved
Atu0486 -1.7 -5.5 dihydroorotate dehydrogenase compare
Atu0400 -1.6 -4.0 orotate phosphoribosyltransferase compare
Atu1163 -1.6 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3469 -1.6 -1.9 phosphoglyceromutase compare
Atu0399 -1.6 -4.8 dihydroorotase compare
Atu2710 -1.5 -7.1 hypothetical protein compare
Atu0361 -1.5 -3.6 transcriptional regulator compare
Atu0421 -1.5 -1.8 ABC transporter, membrane spanning protein compare
Atu0972 -1.5 -5.1 lipA protein compare
Atu2083 -1.5 -3.7 DNA repair protein RecN compare
Atu0839 -1.4 -7.3 hypothetical protein conserved
Atu0941 -1.4 -1.1 hypothetical protein compare
Atu2728 -1.4 -5.2 beta (1-->2) glucan export ATP-binding protein compare
Atu2289 -1.4 -7.5 anthranilate synthase component I and II compare
Atu0188 -1.4 -2.9 ABC transporter, membrane spanning protein (peptide) compare
Atu0190 -1.3 -6.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3008 -1.3 -1.5 hypothetical protein compare
Atu5142 -1.3 -2.5 hypothetical protein compare
Atu1110 -1.3 -2.9 cytosol aminopeptidase compare
Atu0840 -1.3 -6.8 ATP-dependent DNA ligase conserved
Atu0049 -1.2 -3.8 hypothetical protein compare
Atu3031 -1.2 -1.5 hypothetical protein compare
Atu0598 -1.2 -5.0 phosphogluconate dehydratase compare
Atu0298 -1.2 -5.3 orotidine 5 compare
Atu1844 -1.2 -3.3 Phosphoribosylformylglycinamidine synthetase compare
Atu2662 -1.1 -1.8 acetyltransferase compare
Atu3730 -1.1 -1.7 hypothetical protein compare
Atu2554 -1.1 -1.5 lysyl-tRNA synthetase compare
Atu1891 -1.1 -2.3 cobalamin biosynthesis protein compare
Atu0322 -1.1 -5.3 enoyl CoA hydratase compare
Atu0647 -1.1 -4.3 phosphoribosylamine--glycine ligase compare
Atu1028 -1.1 -2.7 hypothetical protein compare
Atu3468 -1.1 -1.0 hypothetical protein compare
Atu2067 -1.1 -1.2 hypothetical protein compare
Atu4686 -1.0 -2.4 hypothetical protein compare
Atu4617 -1.0 -7.0 dTDP-D-glucose-4,6-dehydratase compare
Atu1685 -1.0 -0.9 hypothetical protein compare
Atu1774 -1.0 -4.8 ABC transporter, substrate binding protein (peptide) compare
Atu0017 -1.0 -1.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3754 -1.0 -1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4618 -1.0 -5.5 dTDP-rhamnose-3,5-epimerase compare
Atu4567 -1.0 -4.0 ROK family transcriptional regulator compare
Atu0419 -1.0 -2.6 two component sensor kinase compare
Atu2036 -1.0 -6.3 acetolactate synthase III, large subunit compare
Atu0189 -1.0 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu2796 -1.0 -4.2 precorrin-4 C11-methyltransferase compare
Atu1077 -0.9 -2.1 DNA repair protein compare
Atu3750 -0.9 -2.5 thiamine-phosphate pyrophosphorylase compare
Atu1225 -0.9 -1.1 hypothetical protein compare
Atu1258 -0.9 -3.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu0422 -0.9 -1.2 ABC transporter, membrane spanning protein compare
Atu3707 -0.9 -2.8 phosphoserine aminotransferase compare
Atu4614 -0.9 -4.4 glycosyltransferase compare
Atu2238 -0.9 -3.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1308 -0.9 -3.5 aspartate carbamoyl transferase catalytic subunit compare
Atu2026 -0.9 -3.6 exodeoxyribonuclease V compare
Atu2802 -0.9 -3.8 precorrin-8X methylmutase compare
Atu3763 -0.9 -1.5 hypothetical protein compare
Atu2801 -0.9 -3.2 precorrin-2 C20 methyltransferase compare
Atu3353 -0.8 -5.4 mannose-1-phosphate guanylyltransferase compare
Atu2237 -0.8 -2.4 cytochrome c1 compare
Atu4053 -0.8 -1.4 succinoglycan biosynthesis protein compare
Atu6045 -0.8 -1.5 replication protein C compare
Atu2442 -0.8 -1.3 hypothetical protein compare
Atu0346 -0.8 -1.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu5430 -0.8 -0.7 hypothetical protein compare
Atu0777 -0.8 -0.7 hypothetical protein compare
Atu0086 -0.8 -0.9 ribosome-binding factor A compare
Atu1810 -0.8 -0.9 hypothetical protein compare
Atu2620 -0.8 -1.3 hypothetical protein compare
Atu3009 -0.8 -1.0 exopolysaccharide production protein compare
Atu1307 -0.8 -2.6 dihydroorotase compare
Atu4840 -0.8 -3.4 hypothetical protein compare
Atu3598 -0.8 -0.8 thiol:disulfide interchange protein compare
Atu3697 -0.8 -2.6 ATP-dependent protease LA 2 compare
Atu4613 -0.8 -6.1 glycosyltransferase compare
Atu2040 -0.8 -2.4 phosphoserine phosphatase compare
Atu1686 -0.8 -4.3 peptidyl-prolyl cis-trans isomerse D compare
Atu2183 -0.7 -4.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4866 -0.7 -2.9 hypothetical protein compare
Atu1446 -0.7 -1.2 two component response regulator compare
Atu0977 -0.7 -2.0 serine protease DO-like protease compare
Atu2270 -0.7 -1.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu0030 -0.7 -1.1 phosphocarrier protein HPr compare
Atu1075 -0.7 -4.0 amidophosphoribosyltransferase compare
Atu1254 -0.7 -1.4 transcriptional regulator, ArsR family compare
Atu2799 -0.7 -2.4 precorrin-6x reductase compare
Atu0205 -0.7 -4.8 methylmalonate-semialdehyde dehydrogenase compare
Atu2207 -0.7 -2.3 two component sensor kinase compare
Atu4418 -0.7 -2.1 glutaryl-CoA dehydrogenase compare
Atu2113 -0.7 -1.9 N-acetylmuramoyl-L-alanine amidase compare
Atu2795 -0.7 -3.4 cobalamin biosynthetic protein compare
Atu5125 -0.7 -3.0 GntR family transcriptional regulator compare
Atu8195 -0.7 -2.1 hypothetical protein compare
Atu3634 -0.7 -2.3 penicillin-binding protein dacf precursor compare
Atu0749 -0.7 -1.8 biotin synthesis BioY protein compare
Atu4897 -0.7 -1.3 hypothetical protein compare
Atu8190 -0.7 -3.1 hypothetical protein compare
Atu2804 -0.7 -4.5 cobaltochelatase subunit compare
Atu1760 -0.7 -1.0 hypothetical protein compare
Atu4615 -0.7 -4.4 glucose-1-phosphate thymidylyltransferase compare
Atu1030 -0.7 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0142 -0.7 -1.9 cytochrome o ubiquinol oxidase subunit II compare
Atu1778 -0.7 -5.0 transcription-repair coupling factor compare
Atu0538 -0.7 -1.9 hypothetical protein compare
Atu1359 -0.7 -0.7 dnaK deletion suppressor protein compare
Atu2798 -0.6 -2.0 precorrin-6y methyltransferase compare
Atu3013 -0.6 -3.0 hypothetical protein compare
Atu3293 -0.6 -2.3 D-amino acid dehydrogenase small subunit compare
Atu0585 -0.6 -2.0 hypothetical protein compare
Atu3249 -0.6 -3.3 septum formation inhibitor compare
Atu8082 -0.6 -1.2 hypothetical protein compare
Atu3423 -0.6 -1.4 hypothetical protein compare
Atu4075 -0.6 -2.8 glycogen synthase compare
Atu0331 -0.6 -1.7 sigma-54 modulation protein compare
Atu0726 -0.6 -2.9 ring hydroxylating dioxygenase, alpha-subunit compare
Atu1140 -0.6 -1.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0687 -0.6 -1.3 hypothetical protein compare
Atu3044 -0.6 -2.5 asparaginase compare
Atu0153 -0.6 -2.1 transcriptional regulator, Fur family compare
Atu2808 -0.6 -2.8 cobyric acid synthase compare
Atu0995 -0.6 -3.0 hypothetical protein compare
Atu3497 -0.6 -1.5 hypothetical protein compare
Atu3018 -0.6 -2.5 hypothetical protein compare
Atu4470 -0.6 -2.8 iron ABC transporter ATPase compare
Atu4232 -0.6 -2.9 GntR family transcriptional regulator compare
Atu0544 -0.6 -1.5 hypothetical protein compare
Atu2809 -0.6 -3.3 cobalamin biosynthesis protein compare
Atu2805 -0.6 -2.7 cobalamin synthesis protein compare
Atu0152 -0.6 -0.7 hypothetical protein compare
Atu1336 -0.6 -1.6 hypothetical protein compare
Atu2790 -0.6 -1.4 3-isopropylmalate dehydratase, small subunit compare
Atu0025 -0.6 -1.5 hypothetical protein compare
Atu4352 -0.6 -2.0 hypothetical protein compare
Atu0434 -0.6 -0.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3160 -0.6 -1.4 hypothetical protein compare
Atu4890 -0.6 -1.0 IS426 transposase compare
Atu1213 -0.6 -1.4 hypothetical protein compare
Atu8087 -0.6 -0.8 putative peptidoglycan binding protein compare
Atu0272 -0.6 -2.2 transcriptional regulator, MarR family compare
Atu1619 -0.6 -1.7 protein-export membrane protein SECG compare
Atu1845 -0.6 -1.9 phosphoribosylformylglycinamidine synthase I compare
Atu0580 -0.6 -1.3 flagellar biosynthetic protein compare
Atu2239 -0.5 -1.4 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1588 -0.5 -3.4 homoserine dehydrogenase compare
Atu3311 -0.5 -3.8 phosphomannose isomerase compare
Atu1021 -0.5 -1.0 outer membrane protein compare
Atu4864 -0.5 -2.2 MarR family transcriptional regulator compare
Atu3067 -0.5 -2.5 hypothetical protein compare
Atu2141 -0.5 -1.7 hypothetical protein compare
Atu4889 -0.5 -3.1 hypothetical protein compare
Atu1439 -0.5 -1.3 hypothetical protein compare
Atu1851 -0.5 -1.5 BolA/YrbA family protein compare
Atu2807 -0.5 -2.9 cob(I)alamin adenosyltransferase compare
Atu0971 -0.5 -2.2 two component sensor kinase compare
Atu1354 -0.5 -0.6 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0166 -0.5 -1.2 hypothetical protein compare
Atu2793 -0.5 -1.7 cobyrinic acid a,c-diamide synthase compare
Atu4535 -0.5 -2.0 amino acid ABC transporter substrate-binding protein compare
Atu1850 -0.5 -1.8 phosphoribosylformylglycinamidine synthetase II compare
Atu4198 -0.5 -1.7 hypothetical protein compare
Atu1422 -0.5 -2.9 transcriptional regulator, MarR family compare
Atu4711 -0.5 -1.6 two component sensor kinase compare
Atu4230 -0.5 -3.0 glutamine synthetase compare
Atu1286 -0.5 -1.8 hypothetical protein compare
Atu4364 -0.5 -2.7 LacI family transcriptional regulator compare
Atu0565 -0.5 -1.5 hypothetical protein compare
Atu4217 -0.5 -0.9 TetR family transcriptional regulator compare
Atu3486 -0.5 -0.9 DeoR family transcriptional regulator compare
Atu4099 -0.5 -1.8 hypothetical protein compare
Atu4868 -0.5 -3.5 oxidoreductase compare
Atu2578 -0.5 -1.7 cAMP-dependent protein kinase regulatory subunit compare
Atu0795 -0.5 -0.7 hypothetical protein compare
Atu3578 -0.5 -2.0 glycerol-3-phosphate dehydrogenase compare
Atu0036 -0.5 -1.8 hypothetical protein compare
Atu4887 -0.5 -1.5 hypothetical protein compare
Atu5424 -0.5 -3.2 oxidoreductase compare
Atu0040 -0.5 -0.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2033 -0.5 -2.0 hypothetical protein compare
Atu4841 -0.5 -2.7 DeoR family transcriptional regulator compare
Atu8183 -0.5 -2.5 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress Cisplatin in Agrobacterium fabrum C58

For stress Cisplatin across organisms