| | gene | name | fitness | t score | description | |
|---|
| b0462 | acrB | -7.0 | -12.6 | multidrug efflux system protein (NCBI) | compare |
| b0463 | acrA | -7.0 | -8.3 | multidrug efflux system (NCBI) | compare |
| b3035 | tolC | -6.4 | -6.3 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b3198 | kdsC | -6.3 | -6.1 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) | compare |
| b3631 | rfaG | -6.1 | -11.0 | glucosyltransferase I (NCBI) | compare |
| b3630 | rfaP | -5.8 | -6.9 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b0737 | tolQ | -5.7 | -3.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2528 | iscA | -5.6 | -3.9 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b4443 | gcvB | -5.4 | -3.7 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b1236 | galU | -5.4 | -3.7 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3632 | rfaQ | -5.4 | -27.9 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3842 | rfaH | -5.3 | -5.2 | transcriptional activator RfaH (NCBI) | compare |
| b3052 | rfaE | -5.2 | -3.6 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0222 | lpcA | -5.1 | -3.5 | phosphoheptose isomerase (NCBI) | compare |
| b2512 | yfgL | -5.1 | -7.7 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b4172 | hfq | -4.8 | -3.3 | RNA-binding protein Hfq (NCBI) | compare |
| b3621 | rfaC | -4.7 | -3.3 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b0688 | pgm | -4.7 | -4.6 | phosphoglucomutase (NCBI) | compare |
| b3619 | rfaD | -4.7 | -3.2 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0740 | tolB | -4.7 | -8.4 | translocation protein TolB precursor (NCBI) | compare |
| b0053 | surA | -4.7 | -4.5 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2567 | rnc | -4.6 | -3.2 | ribonuclease III (NCBI) | compare |
| b0739 | tolA | -4.6 | -6.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b0145 | dksA | -4.5 | -5.4 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b3620 | rfaF | -4.3 | -3.0 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3426 | glpD | -4.3 | -10.7 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b0630 | lipB | -4.2 | -2.9 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3199 | yrbK | -4.2 | -4.0 | hypothetical protein (NCBI) | compare |
| b2935 | tktA | -4.1 | -2.8 | transketolase 1, thiamin-binding (NCBI) | compare |
| b0738 | tolR | -4.0 | -4.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2188 | yejM | -3.9 | -10.9 | predicted hydrolase, inner membrane (NCBI) | compare |
| b2501 | ppk | -3.8 | -14.4 | polyphosphate kinase (NCBI) | compare |
| b1286 | rnb | -3.8 | -5.7 | exoribonuclease II (NCBI) | compare |
| b0741 | pal | -3.7 | -7.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0726 | sucA | -3.6 | -5.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3728 | pstS | -3.6 | -9.0 | phosphate transporter subunit (NCBI) | compare |
| b3627 | rfaI | -3.6 | -19.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b3844 | fre | -3.6 | -9.2 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0014 | dnaK | -3.6 | -4.2 | molecular chaperone DnaK (NCBI) | compare |
| b0118 | acnB | -3.5 | -5.4 | aconitate hydratase (NCBI) | compare |
| b1831 | proQ | -3.5 | -4.5 | putative solute/DNA competence effector (NCBI) | compare |
| b3725 | pstB | -3.5 | -4.7 | phosphate transporter subunit (NCBI) | compare |
| b2894 | xerD | -3.4 | -3.3 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b3026 | qseC | -3.3 | -8.8 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4375 | prfC | -3.3 | -11.5 | peptide chain release factor 3 (NCBI) | compare |
| b1830 | prc | -3.1 | -7.9 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0200 | gmhB | -3.1 | -3.0 | hypothetical protein (NCBI) | compare |
| b2282 | nuoH | -3.1 | -5.8 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2617 | smpA | -3.0 | -6.1 | small membrane protein A (VIMSS) | compare |
| b0178 | hlpA | -3.0 | -4.8 | periplasmic chaperone (NCBI) | compare |
| b3811 | xerC | -3.0 | -5.4 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b3386 | rpe | -3.0 | -2.0 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b2278 | nuoL | -2.9 | -12.6 | NADH dehydrogenase subunit L (NCBI) | compare |
| b3628 | rfaB | -2.9 | -17.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b3806 | cyaA | -2.9 | -9.3 | adenylate cyclase (NCBI) | compare |
| b2281 | nuoI | -2.9 | -5.4 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2330 | yfcB | -2.9 | -4.3 | putative adenine-specific methylase (VIMSS) | compare |
| b2284 | nuoF | -2.8 | -8.0 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b2276 | nuoN | -2.8 | -8.3 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b2283 | nuoG | -2.7 | -11.3 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2576 | srmB | -2.7 | -6.8 | ATP-dependent RNA helicase (NCBI) | compare |
| b0724 | sdhB | -2.7 | -8.1 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b0114 | aceE | -2.6 | -4.0 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b1855 | lpxM | -2.6 | -8.0 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0723 | sdhA | -2.6 | -11.8 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b1604 | ydgH | -2.6 | -4.7 | hypothetical protein (NCBI) | compare |
| b2287 | nuoB | -2.6 | -4.7 | NADH dehydrogenase subunit B (NCBI) | compare |
| b2280 | nuoJ | -2.6 | -7.4 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3870 | glnA | -2.6 | -5.4 | glutamine synthetase (NCBI) | compare |
| b0683 | fur | -2.5 | -3.1 | ferric uptake regulator (NCBI) | compare |
| b2285 | nuoE | -2.5 | -3.9 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2820 | recB | -2.5 | -4.9 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b2279 | nuoK | -2.5 | -4.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0949 | uup | -2.4 | -9.3 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2699 | recA | -2.4 | -4.0 | recombinase A (NCBI) | compare |
| b2277 | nuoM | -2.4 | -9.2 | NADH dehydrogenase subunit M (NCBI) | compare |
| b3163 | nlpI | -2.4 | -6.4 | hypothetical protein (NCBI) | compare |
| b3290 | trkA | -2.4 | -6.3 | potassium transporter peripheral membrane component (NCBI) | compare |
| b3162 | deaD | -2.4 | -8.4 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b0547 | ybcN | -2.4 | -2.9 | DLP12 prophage; predicted protein (NCBI) | compare |
| b2897 | ygfY | -2.3 | -5.2 | hypothetical protein (NCBI) | compare |
| b2288 | nuoA | -2.3 | -5.1 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b2286 | nuoC | -2.2 | -7.7 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3636 | rpmG | -2.2 | -2.0 | 50S ribosomal protein L33 (NCBI) | compare |
| b0721 | sdhC | -2.1 | -2.9 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3463 | ftsE | -2.1 | -6.6 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2784 | relA | -2.1 | -10.2 | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | compare |
| b3778 | rep | -2.0 | -11.6 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1693 | aroD | -2.0 | -9.0 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0082 | mraW | -2.0 | -4.1 | S-adenosyl-methyltransferase (NCBI) | compare |
| b0049 | apaH | -2.0 | -7.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b3414 | gntY | -2.0 | -8.3 | predicted gluconate transport associated protein (NCBI) | compare |
| b1290 | sapF | -2.0 | -3.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4480 | hdfR | -1.9 | -6.6 | transcriptional regulator HdfR (NCBI) | compare |
| b2808 | gcvA | -1.9 | -7.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3169 | nusA | -1.9 | -3.8 | transcription elongation factor NusA (NCBI) | compare |
| b3164 | pnp | -1.9 | -5.0 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b3625 | rfaY | -1.9 | -12.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b3871 | bipA | -1.9 | -10.9 | GTP-binding protein (NCBI) | compare |
| b3341 | rpsG | -1.9 | -2.5 | 30S ribosomal protein S7 (NCBI) | compare |
| b3726 | pstA | -1.8 | -6.1 | phosphate transporter subunit (NCBI) | compare |
| b3609 | secB | -1.8 | -2.6 | export protein SecB (NCBI) | compare |
| b2064 | asmA | -1.8 | -4.8 | predicted assembly protein (NCBI) | compare |
| b1130 | phoP | -1.8 | -9.0 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b3281 | aroE | -1.8 | -12.2 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b2313 | cvpA | -1.8 | -5.8 | membrane protein required for colicin V production (NCBI) | compare |
| b3237 | argR | -1.7 | -6.0 | arginine repressor (NCBI) | compare |
| b3644 | yicC | -1.7 | -5.2 | hypothetical protein (NCBI) | compare |
| b4178 | yjeB | -1.7 | -5.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0623 | cspE | -1.6 | -3.2 | cold shock protein E (NCBI) | compare |
| b2830 | nudH | -1.6 | -2.6 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4234 | yjgA | -1.6 | -5.5 | hypothetical protein (NCBI) | compare |
| b3183 | obgE | -1.6 | -1.8 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1192 | ldcA | -1.6 | -4.6 | L,D-carboxypeptidase A (NCBI) | compare |
| b0722 | sdhD | -1.6 | -3.5 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b0429 | cyoD | -1.5 | -5.7 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b4177 | purA | -1.5 | -4.4 | adenylosuccinate synthetase (NCBI) | compare |
| b0677 | nagA | -1.5 | -6.0 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b1235 | rssB | -1.5 | -8.3 | response regulator of RpoS (NCBI) | compare |
| b1269 | rluB | -1.5 | -3.5 | 23S rRNA pseudouridylate synthase (NCBI) | compare |
| b2297 | pta | -1.5 | -2.3 | phosphate acetyltransferase (NCBI) | compare |
| b1658 | purR | -1.5 | -6.0 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b3150 | yraP | -1.5 | -7.1 | hypothetical protein (NCBI) | compare |
| b0928 | aspC | -1.5 | -7.3 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b1252 | tonB | -1.5 | -4.3 | membrane spanning protein in TonB-ExbB-ExbD complex (NCBI) | compare |
| b3389 | aroB | -1.5 | -9.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b0471 | ybaB | -1.5 | -4.3 | hypothetical protein (NCBI) | compare |
| b3727 | pstC | -1.4 | -4.5 | phosphate transporter subunit (NCBI) | compare |
| b4139 | aspA | -1.4 | -7.4 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b3462 | ftsX | -1.4 | -6.1 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b4000 | hupA | -1.4 | -5.7 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3082 | ygjM | -1.4 | -2.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0436 | tig | -1.4 | -6.5 | trigger factor (NCBI) | compare |
| b0890 | ftsK | -1.4 | -7.5 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b2822 | recC | -1.4 | -4.5 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2937 | speB | -1.4 | -6.8 | agmatinase (NCBI) | compare |
| b4509 | ylcG | -1.4 | -1.5 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3741 | gidA | -1.4 | -7.7 | glucose-inhibited division protein A (NCBI) | compare |
| b3195 | yrbF | -1.4 | -8.4 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b2498 | upp | -1.4 | -4.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3390 | aroK | -1.4 | -2.2 | shikimate kinase I (NCBI) | compare |
| b0428 | cyoE | -1.3 | -6.5 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2572 | rseA | -1.3 | -2.2 | anti-sigma factor (NCBI) | compare |
| b4685 | yrbN | -1.3 | -2.5 | expressed protein (RefSeq) | compare |
| b1129 | phoQ | -1.3 | -7.5 | sensory histidine kinase in two-compoent regulatory system with PhoP (NCBI) | compare |
| b0957 | ompA | -1.3 | -4.4 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b3192 | yrbC | -1.3 | -8.0 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0080 | fruR | -1.3 | -5.9 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3194 | yrbE | -1.3 | -8.3 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b0439 | lon | -1.3 | -5.3 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b2346 | vacJ | -1.3 | -6.9 | predicted lipoprotein (NCBI) | compare |
| b2431 | b2431 | -1.3 | -7.3 | orf, hypothetical protein (VIMSS) | compare |
| b2689 | yqaA | -1.3 | -4.1 | conserved inner membrane protein (NCBI) | compare |
| b4042 | dgkA | -1.3 | -3.8 | diacylglycerol kinase (NCBI) | compare |
| b1531 | marA | -1.3 | -3.7 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b1248 | b1248 | -1.2 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b0728 | sucC | -1.2 | -4.8 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b0430 | cyoC | -1.2 | -3.5 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4239 | treC | -1.2 | -4.6 | trehalose-6-P hydrolase (NCBI) | compare |
| b3649 | rpoZ | -1.2 | -3.7 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b3764 | yifE | -1.2 | -4.7 | hypothetical protein (NCBI) | compare |
| b3706 | trmE | -1.2 | -6.0 | tRNA modification GTPase (NCBI) | compare |
| b3166 | truB | -1.1 | -4.9 | tRNA pseudouridine synthase B (NCBI) | compare |
| b3916 | pfkA | -1.1 | -4.1 | 6-phosphofructokinase (NCBI) | compare |
| b0548 | ninE | -1.1 | -1.2 | DLP12 prophage; conserved protein (NCBI) | compare |
| b1123 | potD | -1.1 | -4.7 | spermidine/putrescine ABC transporter periplasmic substrate-binding protein (NCBI) | compare |
| b0720 | gltA | -1.1 | -4.5 | citrate synthase (NCBI) | compare |
| b0008 | talB | -1.1 | -5.7 | transaldolase B (NCBI) | compare |
| b2569 | lepA | -1.1 | -4.4 | GTP-binding protein LepA (NCBI) | compare |
| b3193 | yrbD | -1.1 | -6.8 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b2340 | sixA | -1.1 | -4.2 | phosphohistidine phosphatase (NCBI) | compare |
| b4062 | soxS | -1.1 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4179 | vacB | -1.1 | -6.6 | putative enzyme (VIMSS) | compare |
| b4410 | ecnA | -1.1 | -1.5 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b2620 | smpB | -1.1 | -1.9 | SsrA-binding protein (NCBI) | compare |
| b3962 | udhA | -1.0 | -6.7 | putative oxidoreductase (VIMSS) | compare |
| b3398 | yrfF | -1.0 | -2.8 | predicted inner membrane protein (NCBI) | compare |
| b1860 | ruvB | -1.0 | -2.1 | Holliday junction DNA helicase B (NCBI) | compare |
| b3236 | mdh | -1.0 | -5.5 | malate dehydrogenase (NCBI) | compare |
| b1551 | b1551 | -1.0 | -2.3 | orf, hypothetical protein (VIMSS) | compare |
| b3210 | arcB | -1.0 | -5.8 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b0888 | trxB | -1.0 | -3.1 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b3807 | cyaY | -1.0 | -4.1 | frataxin-like protein (NCBI) | compare |
| b3247 | cafA | -1.0 | -7.0 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b0866 | ybjQ | -1.0 | -1.3 | hypothetical protein (NCBI) | compare |
| b1292 | sapC | -1.0 | -2.0 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0432 | cyoA | -1.0 | -6.7 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b3363 | ppiA | -1.0 | -5.8 | peptidyl-prolyl cis-trans isomerase A (rotamase A) (NCBI) | compare |
| b2948 | yqgE | -1.0 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b4585 | sroB | -1.0 | -1.3 | Novel sRNA, function unknown (RefSeq) | compare |
| b1294 | sapA | -1.0 | -5.6 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4203 | rplI | -1.0 | -3.4 | 50S ribosomal protein L9 (NCBI) | compare |
| b1676 | pykF | -1.0 | -3.9 | pyruvate kinase (NCBI) | compare |
| b3191 | yrbB | -0.9 | -6.0 | orf, hypothetical protein (VIMSS) | compare |
| b0952 | ymbA | -0.9 | -3.8 | conserved protein (RefSeq) | compare |
| b1594 | dgsA | -0.9 | -3.8 | DNA-binding transcriptional repressor (NCBI) | compare |
| b2895 | fldB | -0.9 | -2.7 | flavodoxin 2 (NCBI) | compare |
| b0729 | sucD | -0.9 | -2.7 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b1293 | sapB | -0.9 | -1.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0431 | cyoB | -0.9 | -6.3 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |