Experiment set4IT049 for Agrobacterium fabrum C58

Compare to:

R2A with Spectinomycin dihydrochloride pentahydrate 0.002 mM

200 most important genes:

  gene name fitness t score description  
Atu3763 -4.4 -4.2 hypothetical protein compare
Atu2710 -3.8 -9.4 hypothetical protein compare
Atu2728 -2.9 -7.7 beta (1-->2) glucan export ATP-binding protein compare
Atu1307 -2.9 -5.9 dihydroorotase compare
Atu2113 -2.8 -3.1 N-acetylmuramoyl-L-alanine amidase compare
Atu0434 -2.7 -4.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1030 -2.7 -2.9 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4728 -2.5 -16.4 ABC transporter permease conserved
Atu1308 -2.5 -6.9 aspartate carbamoyl transferase catalytic subunit compare
Atu0399 -2.4 -6.9 dihydroorotase compare
Atu0971 -2.4 -5.0 two component sensor kinase compare
Atu0184 -2.3 -2.8 glucokinase compare
Atu1163 -2.3 -3.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3634 -2.2 -7.3 penicillin-binding protein dacf precursor compare
Atu0972 -2.2 -5.4 lipA protein compare
Atu0486 -2.1 -4.3 dihydroorotate dehydrogenase compare
Atu0103 -2.0 -7.8 penicillin-binding protein compare
Atu2684 -1.9 -1.5 hypothetical protein compare
Atu1687 -1.8 -5.8 anthranilate phosphoribosyltransferase compare
Atu0346 -1.8 -4.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0784 -1.8 -2.7 hypothetical protein compare
Atu4418 -1.8 -4.7 glutaryl-CoA dehydrogenase compare
Atu0031 -1.8 -2.2 PTS system, IIA component compare
Atu0298 -1.7 -6.3 orotidine 5 compare
Atu1688 -1.7 -4.6 indole-3-glycerol-phosphate synthase compare
Atu0598 -1.7 -7.4 phosphogluconate dehydratase compare
Atu1028 -1.6 -3.6 hypothetical protein compare
Atu4773 -1.6 -2.6 two component response regulator compare
Atu1021 -1.6 -2.9 outer membrane protein compare
Atu1359 -1.6 -1.4 dnaK deletion suppressor protein compare
Atu1446 -1.6 -2.0 two component response regulator compare
Atu0188 -1.6 -4.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0400 -1.6 -4.0 orotate phosphoribosyltransferase compare
Atu4166 -1.6 -2.8 UDP-glucose 4-epimerase compare
Atu3608 -1.6 -7.5 hypothetical protein compare
Atu2289 -1.5 -8.3 anthranilate synthase component I and II compare
Atu3468 -1.5 -1.4 hypothetical protein compare
Atu2766 -1.4 -10.9 NAD-glutamate dehydrogenase compare
Atu0190 -1.4 -8.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1303 -1.4 -9.5 exoribonuclease compare
Atu0897 -1.4 -10.7 protease II compare
Atu1845 -1.4 -2.1 phosphoribosylformylglycinamidine synthase I compare
Atu1140 -1.4 -2.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0017 -1.3 -1.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0920 -1.3 -4.1 hypothetical protein compare
Atu1850 -1.3 -3.0 phosphoribosylformylglycinamidine synthetase II compare
Atu2640 -1.3 -5.1 hypothetical protein compare
Atu6098 -1.3 -0.8 transcriptional regulator, HTH family compare
Atu1131 -1.3 -4.8 outer membrane protein compare
Atu4346 -1.3 -4.3 hypothetical protein compare
Atu0647 -1.3 -4.8 phosphoribosylamine--glycine ligase compare
Atu4108 -1.3 -7.9 ribonuclease D compare
Atu3311 -1.3 -10.0 phosphomannose isomerase compare
Atu2787 -1.3 -1.3 hypothetical protein compare
Atu3353 -1.3 -7.1 mannose-1-phosphate guanylyltransferase compare
Atu1644 -1.3 -4.0 hypothetical protein compare
Atu3755 -1.3 -5.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2183 -1.3 -6.2 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1844 -1.3 -1.8 Phosphoribosylformylglycinamidine synthetase compare
Atu4618 -1.3 -8.0 dTDP-rhamnose-3,5-epimerase compare
Atu1075 -1.2 -6.2 amidophosphoribosyltransferase compare
Atu3001 -1.2 -3.4 hypothetical protein compare
Atu0941 -1.2 -1.1 hypothetical protein compare
Atu1344 -1.2 -1.7 hypothetical protein compare
Atu2052 -1.2 -5.6 hypothetical protein compare
Atu4614 -1.2 -6.6 glycosyltransferase compare
Atu3754 -1.2 -2.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2193 -1.2 -1.3 hypothetical protein compare
Atu1714 -1.2 -1.7 exonuclease III compare
Atu3712 -1.2 -1.3 hypothetical protein compare
Atu3008 -1.1 -1.6 hypothetical protein compare
Atu2554 -1.1 -1.7 lysyl-tRNA synthetase compare
Atu1774 -1.1 -5.2 ABC transporter, substrate binding protein (peptide) compare
Atu1141 -1.1 -5.3 Phosphoribosylglycinamide synthetase compare
Atu2746 -1.1 -3.4 hypothetical protein compare
Atu3668 -1.1 -3.6 siderophore biosynthesis protein compare
Atu2650 -1.1 -6.8 glycerol-3-phosphate dehydrogenase compare
Atu3486 -1.1 -1.8 DeoR family transcriptional regulator compare
Atu3730 -1.1 -1.3 hypothetical protein compare
Atu4873 -1.1 -5.5 TetR family transcriptional regulator compare
Atu4217 -1.1 -1.5 TetR family transcriptional regulator compare
Atu4075 -1.1 -4.6 glycogen synthase compare
Atu1646 -1.1 -5.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu3017 -1.0 -1.8 phosphoglyceromutase compare
Atu2379 -1.0 -6.1 phosphomannomutase compare
Atu0977 -1.0 -2.8 serine protease DO-like protease compare
Atu3727 -1.0 -2.2 hypothetical protein compare
Atu3739 -1.0 -2.4 phosphoglycerate kinase compare
Atu0039 -1.0 -2.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu2801 -1.0 -3.7 precorrin-2 C20 methyltransferase compare
Atu2798 -0.9 -3.6 precorrin-6y methyltransferase compare
Atu0419 -0.9 -2.6 two component sensor kinase compare
Atu0375 -0.9 -1.8 small heat shock protein compare
Atu2237 -0.9 -3.7 cytochrome c1 compare
Atu0535 -0.9 -4.0 hypothetical protein compare
Atu4617 -0.9 -5.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2067 -0.9 -1.2 hypothetical protein compare
Atu0525 -0.9 -2.7 transcriptional regulator, LuxR family compare
Atu1447 -0.9 -2.4 two component sensor kinase compare
Atu2793 -0.9 -3.0 cobyrinic acid a,c-diamide synthase compare
Atu1647 -0.9 -4.7 ABC transporter, membrane spanning protein compare
Atu2662 -0.9 -1.5 acetyltransferase compare
Atu0211 -0.9 -4.0 hypothetical protein compare
Atu4888 -0.8 -4.3 hypothetical protein compare
Atu4616 -0.8 -1.6 dTDP-4-dehydrorhamnose reductase compare
Atu0845 -0.8 -2.5 hypothetical protein compare
Atu1355 -0.8 -3.8 hypothetical protein compare
Atu4053 -0.8 -1.5 succinoglycan biosynthesis protein compare
Atu1645 -0.8 -4.5 ABC transporter, substrate binding protein compare
Atu1056 -0.8 -2.8 hypothetical protein compare
Atu2267 -0.8 -2.8 hypothetical protein compare
Atu4077 -0.8 -4.8 glycogen branching protein compare
Atu3034 -0.8 -4.1 ROK family transcriptional regulator compare
Atu1685 -0.8 -0.8 hypothetical protein compare
Atu3011 -0.8 -2.5 ArsR family transcriptional regulator compare
Atu1588 -0.8 -3.9 homoserine dehydrogenase compare
Atu6114 -0.8 -1.3 hypothetical protein compare
Atu3013 -0.8 -2.9 hypothetical protein compare
Atu4615 -0.8 -5.0 glucose-1-phosphate thymidylyltransferase compare
Atu2656 -0.8 -4.8 hypothetical protein compare
Atu1810 -0.8 -1.0 hypothetical protein compare
Atu2805 -0.8 -3.1 cobalamin synthesis protein compare
Atu2655 -0.8 -4.5 hypothetical protein compare
Atu3121 -0.8 -1.0 cold shock protein compare
Atu0189 -0.7 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu0876 -0.7 -1.4 superoxide dismutase compare
Atu4161 -0.7 -1.7 hypothetical protein compare
Atu2040 -0.7 -3.5 phosphoserine phosphatase compare
Atu1620 -0.7 -5.0 triosephosphate isomerase compare
Atu8131 -0.7 -5.3 pH adaption potassium efflux system protein compare
Atu4613 -0.7 -5.5 glycosyltransferase compare
Atu1495 -0.7 -1.7 hypothetical protein compare
Atu0036 -0.7 -1.6 hypothetical protein compare
Atu4882 -0.7 -2.2 hypothetical protein compare
Atu0106 -0.7 -2.3 cold shock protein compare
Atu4072 -0.7 -1.7 nodulation protein N compare
Atu4897 -0.7 -1.7 hypothetical protein compare
Atu2059 -0.7 -3.7 transcriptional regulator, TetR family compare
Atu0726 -0.7 -4.3 ring hydroxylating dioxygenase, alpha-subunit compare
Atu0479 -0.7 -2.5 ABC transporter, substrate binding protein (amino acid) compare
Atu4502 -0.7 -3.4 cobalamin synthesis protein compare
Atu4468 -0.7 -4.0 iron transport ABC transporter permease compare
Atu8138 -0.7 -1.2 hypothetical protein compare
Atu5160 -0.7 -1.4 transcriptional regulator protein compare
Atu4866 -0.7 -5.4 hypothetical protein compare
Atu8202 -0.7 -2.7 hypothetical protein compare
Atu2439 -0.7 -0.8 hypothetical protein compare
Atu1285 -0.7 -3.4 metal dependent hydrolase compare
Atu2809 -0.7 -3.6 cobalamin biosynthesis protein compare
Atu0727 -0.7 -4.3 ferredoxin I compare
Atu3485 -0.7 -4.7 short chain dehydrogenase compare
Atu2804 -0.7 -4.5 cobaltochelatase subunit compare
Atu3707 -0.7 -1.5 phosphoserine aminotransferase compare
Atu0718 -0.7 -2.4 hypothetical protein compare
Atu4893 -0.7 -4.0 hypothetical protein compare
Atu0029 -0.7 -2.0 S-adenosylhomocysteine hydrolase compare
Atu0043 -0.7 -1.6 imidazoleglycerol-phosphate dehydratase compare
Atu2511 -0.6 -3.7 D-alanine aminotransferase compare
Atu4892 -0.6 -5.2 hypothetical protein compare
Atu5158 -0.6 -1.6 hypothetical protein compare
Atu0524 -0.6 -2.7 transcriptional regulator, LuxR family compare
Atu0931 -0.6 -4.3 penicillin binding protein compare
Atu3597 -0.6 -3.9 3-hydroxybutyryl-CoA dehydrogenase compare
Atu2799 -0.6 -2.2 precorrin-6x reductase compare
Atu3496 -0.6 -2.8 hypothetical protein compare
Atu1640 -0.6 -3.1 hypothetical protein compare
Atu3044 -0.6 -2.6 asparaginase compare
Atu3012 -0.6 -1.5 hypothetical protein compare
Atu3026 -0.6 -3.3 short chain dehydrogenase compare
Atu1007 -0.6 -1.9 hypothetical protein compare
Atu2807 -0.6 -3.4 cob(I)alamin adenosyltransferase compare
Atu1739 -0.6 -2.3 permease compare
Atu2036 -0.6 -4.6 acetolactate synthase III, large subunit compare
Atu4894 -0.6 -3.7 transposase compare
Atu3019 -0.6 -4.6 hypothetical protein compare
Atu1709 -0.6 -3.6 glycosyl hydrolase compare
Atu4881 -0.6 -3.3 hypothetical protein compare
Atu0322 -0.6 -1.9 enoyl CoA hydratase compare
Atu0503 -0.6 -4.6 enoyl-CoA hydratase compare
Atu4711 -0.6 -2.6 two component sensor kinase compare
Atu1387 -0.6 -1.1 transcriptional regulator, GntR family compare
Atu2729 -0.6 -1.6 hypothetical protein compare
Atu3886 -0.6 -3.7 lysophospholipase compare
Atu2479 -0.6 -2.0 tRNA-Gly compare
Atu5468 -0.6 -1.2 hypothetical protein compare
Atu0499 -0.6 -3.4 hypothetical protein compare
Atu4223 -0.6 -0.8 sarcosine oxidase delta subunit compare
Atu1457 -0.6 -1.2 hypothetical protein compare
Atu1801 -0.6 -1.7 hypothetical protein compare
Atu5430 -0.6 -0.6 hypothetical protein compare
Atu3123 -0.6 -2.0 30S ribosomal protein S21 compare
Atu2747 -0.6 -3.4 hypothetical protein compare
Atu8029 -0.6 -1.1 hypothetical protein compare
Atu4213 -0.6 -2.6 hypothetical protein compare
Atu0401 -0.6 -2.8 fructokinase compare
Atu1902 -0.6 -2.3 transketolase compare
Atu3469 -0.6 -0.9 phosphoglyceromutase compare
Atu0986 -0.6 -1.0 hypothetical protein compare
Atu0693 -0.6 -2.7 PmbA/TldD related protein compare
Atu4880 -0.6 -4.1 AraC family transcriptional regulator compare


Specific Phenotypes

For 5 genes in this experiment

For stress Spectinomycin dihydrochloride pentahydrate in Agrobacterium fabrum C58

For stress Spectinomycin dihydrochloride pentahydrate across organisms