Experiment set4IT046 for Agrobacterium fabrum C58

Compare to:

R2A with rubidium chloride 600 mM

200 most important genes:

  gene name fitness t score description  
Atu0400 -3.6 -6.7 orotate phosphoribosyltransferase compare
Atu1446 -3.0 -2.7 two component response regulator compare
Atu0399 -2.9 -6.9 dihydroorotase compare
Atu0017 -2.8 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0510 -2.7 -10.2 pH adaption potassium efflux system protein compare
Atu8131 -2.7 -15.5 pH adaption potassium efflux system protein compare
Atu0298 -2.6 -6.8 orotidine 5 compare
Atu1307 -2.6 -5.9 dihydroorotase compare
Atu0486 -2.5 -5.0 dihydroorotate dehydrogenase compare
Atu1687 -2.4 -6.8 anthranilate phosphoribosyltransferase compare
Atu0508 -2.4 -6.6 PH Adaption potassium efflux system compare
Atu1308 -2.3 -6.0 aspartate carbamoyl transferase catalytic subunit compare
Atu0086 -2.1 -1.6 ribosome-binding factor A compare
Atu2067 -2.0 -1.8 hypothetical protein compare
Atu1030 -2.0 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4317 -2.0 -3.9 TetR family transcriptional regulator compare
Atu3754 -1.9 -3.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1644 -1.8 -2.9 hypothetical protein compare
Atu3750 -1.8 -4.1 thiamine-phosphate pyrophosphorylase compare
Atu4773 -1.7 -2.0 two component response regulator compare
Atu2289 -1.7 -8.2 anthranilate synthase component I and II compare
Atu1075 -1.7 -6.0 amidophosphoribosyltransferase compare
Atu1646 -1.6 -7.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1645 -1.6 -6.7 ABC transporter, substrate binding protein compare
Atu1677 -1.6 -4.5 queuine tRNA-ribosyltransferase compare
Atu1141 -1.6 -4.3 Phosphoribosylglycinamide synthetase compare
Atu1844 -1.5 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu0647 -1.5 -7.2 phosphoribosylamine--glycine ligase compare
Atu1845 -1.5 -2.5 phosphoribosylformylglycinamidine synthase I compare
Atu0511 -1.4 -3.5 pH adaption potassium efflux system protein compare
Atu2710 -1.4 -5.8 hypothetical protein compare
Atu3763 -1.4 -2.4 hypothetical protein compare
Atu1850 -1.4 -3.1 phosphoribosylformylglycinamidine synthetase II compare
Atu1647 -1.4 -5.3 ABC transporter, membrane spanning protein compare
Atu3755 -1.4 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2464 -1.3 -2.5 formyltetrahydrofolate deformylase compare
Atu1140 -1.3 -3.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3712 -1.3 -1.4 hypothetical protein compare
Atu0876 -1.3 -1.9 superoxide dismutase compare
Atu3353 -1.2 -6.7 mannose-1-phosphate guanylyltransferase compare
Atu2799 -1.2 -4.2 precorrin-6x reductase compare
Atu1688 -1.2 -2.2 indole-3-glycerol-phosphate synthase compare
Atu0972 -1.2 -2.9 lipA protein compare
Atu0043 -1.2 -1.5 imidazoleglycerol-phosphate dehydratase compare
Atu0507 -1.1 -3.0 potassium efflux system protein compare
Atu2655 -1.1 -5.7 hypothetical protein compare
Atu0103 -1.1 -6.8 penicillin-binding protein compare
Atu1686 -1.1 -5.5 peptidyl-prolyl cis-trans isomerse D compare
Atu1028 -1.1 -2.8 hypothetical protein compare
Atu0189 -1.1 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu2673 -1.1 -6.2 hypothetical protein compare
Atu2125 -1.1 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu2555 -1.1 -2.9 L-lysine 2,3-aminomutase compare
Atu2045 -1.1 -6.6 HFLK protein compare
Atu1566 -1.1 -1.3 hypothetical protein compare
Atu2554 -1.0 -1.2 lysyl-tRNA synthetase compare
Atu2807 -1.0 -4.8 cob(I)alamin adenosyltransferase compare
Atu1891 -1.0 -3.1 cobalamin biosynthesis protein compare
Atu1699 -1.0 -1.2 molybdopterin-guanine dinucleotide biosynthesis protein B compare
Atu2805 -1.0 -3.8 cobalamin synthesis protein compare
Atu0434 -1.0 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0040 -1.0 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0029 -1.0 -3.1 S-adenosylhomocysteine hydrolase compare
Atu3461 -1.0 -1.8 GntR family transcriptional regulator compare
Atu0977 -0.9 -3.0 serine protease DO-like protease compare
Atu2804 -0.9 -5.5 cobaltochelatase subunit compare
Atu2802 -0.9 -2.9 precorrin-8X methylmutase compare
Atu1810 -0.9 -1.1 hypothetical protein compare
Atu1739 -0.9 -3.3 permease compare
Atu4617 -0.9 -5.3 dTDP-D-glucose-4,6-dehydratase compare
Atu2620 -0.9 -1.4 hypothetical protein compare
Atu2768 -0.9 -4.6 hypothetical protein compare
Atu2716 -0.9 -5.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu4108 -0.9 -4.8 ribonuclease D compare
Atu1364 -0.9 -3.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2729 -0.9 -1.8 hypothetical protein compare
Atu1445 -0.9 -2.4 two component sensor kinase compare
Atu1573 -0.8 -1.0 hypothetical protein compare
Atu4613 -0.8 -6.6 glycosyltransferase compare
Atu8194 -0.8 -2.4 hypothetical protein compare
Atu0184 -0.8 -1.1 glucokinase compare
Atu4618 -0.8 -6.3 dTDP-rhamnose-3,5-epimerase compare
Atu2656 -0.8 -3.9 hypothetical protein compare
Atu2793 -0.8 -2.9 cobyrinic acid a,c-diamide synthase compare
Atu5145 -0.8 -2.1 acetyltransferase compare
Atu2809 -0.8 -4.6 cobalamin biosynthesis protein compare
Atu4486 -0.8 -3.1 nitroreductase compare
Atu4614 -0.8 -5.0 glycosyltransferase compare
Atu4616 -0.8 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu3311 -0.8 -5.6 phosphomannose isomerase compare
Atu2796 -0.8 -3.1 precorrin-4 C11-methyltransferase compare
Atu1542 -0.8 -3.4 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1110 -0.8 -2.3 cytosol aminopeptidase compare
Atu1518 -0.8 -2.7 transcriptional regulator, Fur family compare
Atu2801 -0.8 -2.4 precorrin-2 C20 methyltransferase compare
Atu0971 -0.8 -2.5 two component sensor kinase compare
Atu0723 -0.8 -1.3 FAD dependent oxidoreductase compare
Atu8118 -0.8 -2.6 putative universal stress protein compare
Atu0190 -0.8 -4.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8190 -0.8 -2.3 hypothetical protein compare
Atu2183 -0.8 -5.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4470 -0.7 -3.9 iron ABC transporter ATPase compare
Atu2650 -0.7 -5.1 glycerol-3-phosphate dehydrogenase compare
Atu0149 -0.7 -1.4 enoyl-(acyl-carrier-protein) reductase compare
Atu0272 -0.7 -2.9 transcriptional regulator, MarR family compare
Atu8168 -0.7 -2.3 hypothetical protein compare
Atu0036 -0.7 -1.4 hypothetical protein compare
Atu0361 -0.7 -1.4 transcriptional regulator compare
Atu2472 -0.7 -1.1 hypothetical protein compare
Atu1468 -0.7 -3.5 hypothetical protein compare
Atu2207 -0.7 -2.0 two component sensor kinase compare
Atu1076 -0.7 -1.6 colicin V production protein compare
Atu1057 -0.7 -2.1 ADP-Ribose Pyrophosphatase compare
Atu4610 -0.7 -5.1 sugar nucleotide epimerase/dehydratase compare
Atu2057 -0.7 -1.3 DNA helicase II compare
Atu2808 -0.7 -3.3 cobyric acid synthase compare
Atu5424 -0.7 -4.2 oxidoreductase compare
Atu0953 -0.7 -0.7 hypothetical protein compare
Atu4468 -0.7 -4.4 iron transport ABC transporter permease compare
Atu0941 -0.7 -0.7 hypothetical protein compare
Atu2532 -0.7 -3.1 transcriptional regulator, MarR family compare
Atu0986 -0.7 -1.1 hypothetical protein compare
Atu1103 -0.7 -2.0 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0602 -0.7 -3.6 glutamine synthetase compare
Atu6165 -0.7 -0.7 hypothetical protein compare
Atu0269 -0.7 -2.3 exodeoxyribonuclease VII large subunit compare
Atu0030 -0.7 -1.0 phosphocarrier protein HPr compare
Atu0784 -0.7 -2.8 hypothetical protein compare
Atu0467 -0.7 -2.8 hypothetical protein compare
Atu1149 -0.7 -1.1 adenylate cyclase compare
Atu2193 -0.7 -0.8 hypothetical protein compare
Atu8029 -0.7 -1.3 hypothetical protein compare
Atu4609 -0.7 -4.3 glycosyltransferase compare
Atu0354 -0.7 -1.5 ferric uptake regulator compare
Atu4499 -0.6 -1.9 hypothetical protein compare
Atu1417 -0.6 -2.8 enoyl-CoA hydratase compare
Atu0339 -0.6 -2.0 hypothetical protein compare
Atu4075 -0.6 -3.3 glycogen synthase compare
Atu2682 -0.6 -1.8 hypothetical protein compare
Atu3697 -0.6 -1.9 ATP-dependent protease LA 2 compare
Atu2083 -0.6 -1.2 DNA repair protein RecN compare
Atu0421 -0.6 -1.0 ABC transporter, membrane spanning protein compare
Atu2640 -0.6 -2.2 hypothetical protein compare
Atu3647 -0.6 -2.0 hypothetical protein compare
Atu0931 -0.6 -4.0 penicillin binding protein compare
Atu5160 -0.6 -1.8 transcriptional regulator protein compare
Atu0062 -0.6 -3.2 transcriptional regulator, ROK family compare
Atu4093 -0.6 -1.7 hypothetical protein compare
Atu2040 -0.6 -1.7 phosphoserine phosphatase compare
Atu3597 -0.6 -3.1 3-hydroxybutyryl-CoA dehydrogenase compare
Atu2442 -0.6 -1.3 hypothetical protein compare
Atu6114 -0.6 -0.7 hypothetical protein compare
Atu0535 -0.6 -2.9 hypothetical protein compare
Atu2238 -0.6 -2.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0401 -0.6 -2.7 fructokinase compare
Atu1258 -0.6 -2.3 ATP-dependent Clp protease, proteolytic subunit compare
Atu1705 -0.6 -2.0 SEC-independent protein translocase protein compare
Atu0135 -0.6 -2.5 uracil phosphoribosyltransferase compare
Atu1628 -0.6 -1.6 hypothetical protein compare
Atu1495 -0.6 -1.3 hypothetical protein compare
Atu3474 -0.6 -3.1 acyl-CoA dehydrogenase compare
Atu1620 -0.6 -3.7 triosephosphate isomerase compare
Atu3472 -0.6 -2.1 2-oxoisovalerate dehydrogenase subunit beta compare
Atu4418 -0.6 -1.7 glutaryl-CoA dehydrogenase compare
Atu4608 -0.6 -3.9 hypothetical protein compare
Atu0846 -0.6 -1.6 transcriptional regulator, MarR family compare
Atu2662 -0.6 -1.0 acetyltransferase compare
Atu1874 -0.5 -1.2 RecA protein compare
Atu5464 -0.5 -3.0 IclR family transcriptional regulator compare
Atu0205 -0.5 -3.4 methylmalonate-semialdehyde dehydrogenase compare
Atu3822 -0.5 -2.4 hypothetical protein compare
Atu3468 -0.5 -0.6 hypothetical protein compare
Atu3969 -0.5 -2.0 sugar ABC transporter permease compare
Atu2200 -0.5 -1.6 cold shock protein compare
Atu3798 -0.5 -2.0 TetR family transcriptional regulator compare
Atu2800 -0.5 -0.9 precorrin-3B C17-methyltransferase compare
Atu0332 -0.5 -2.8 RNA polymerase sigma-54 factor compare
Atu3908 -0.5 -3.3 GntR family transcriptional regulator compare
Atu1529 -0.5 -1.9 nitrogen fixation protein FixH compare
Atu2728 -0.5 -2.2 beta (1-->2) glucan export ATP-binding protein compare
Atu3475 -0.5 -3.5 acetyl-CoA C-acetyltransferase compare
Atu4615 -0.5 -3.4 glucose-1-phosphate thymidylyltransferase compare
Atu0803 -0.5 -4.0 pyruvate,orthophosphate dikinase compare
Atu2215 -0.5 -2.7 hypothetical protein compare
Atu3466 -0.5 -1.7 ArsR family transcriptional regulator compare
Atu2616 -0.5 -3.3 hypothetical protein compare
Atu1780 -0.5 -3.0 ATP-dependent DNA helicase compare
Atu4124 -0.5 -2.4 branched chain amino acid ABC transporter ATPase compare
Atu1356 -0.5 -3.8 hypothetical protein compare
Atu5179 -0.5 -1.8 hypothetical protein compare
Atu4173 -0.5 -1.4 phosphoenolpyruvate-protein phosphotransferase compare
Atu3878 -0.5 -3.5 transcriptional regulator compare
Atu2333 -0.5 -3.2 ATP-dependent RNA helicase compare
Atu3479 -0.5 -2.8 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu2044 -0.5 -2.1 HFLC protein compare
Atu0502 -0.5 -2.0 acetyl-CoA acetyltransferase compare
Atu1260 -0.5 -1.0 hypothetical protein compare
Atu0015 -0.5 -2.6 intracellular PHB depolymerase compare
Atu0386 -0.5 -1.0 hypothetical protein compare
Atu1692 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For stress rubidium chloride in Agrobacterium fabrum C58

For stress rubidium chloride across organisms