Experiment set4IT045 for Agrobacterium fabrum C58

Compare to:

R2A with Lithium chloride 900 mM

200 most important genes:

  gene name fitness t score description  
Atu0544 -3.5 -2.8 hypothetical protein compare
Atu0017 -3.5 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0912 -3.2 -1.7 Na+/H+ antiporter compare
Atu1687 -2.8 -6.3 anthranilate phosphoribosyltransferase compare
Atu4618 -2.6 -12.4 dTDP-rhamnose-3,5-epimerase compare
Atu4614 -2.5 -10.0 glycosyltransferase compare
Atu0031 -2.5 -2.5 PTS system, IIA component compare
Atu1688 -2.3 -3.2 indole-3-glycerol-phosphate synthase compare
Atu2289 -2.3 -10.3 anthranilate synthase component I and II compare
Atu4617 -2.3 -12.5 dTDP-D-glucose-4,6-dehydratase compare
Atu1307 -2.2 -4.5 dihydroorotase compare
Atu4616 -2.2 -3.0 dTDP-4-dehydrorhamnose reductase compare
Atu3353 -2.2 -14.5 mannose-1-phosphate guanylyltransferase compare
Atu4615 -2.2 -10.0 glucose-1-phosphate thymidylyltransferase compare
Atu0298 -2.1 -6.8 orotidine 5 compare
Atu4613 -2.1 -13.1 glycosyltransferase compare
Atu0400 -2.1 -4.3 orotate phosphoribosyltransferase compare
Atu1810 -2.1 -1.6 hypothetical protein compare
Atu1308 -2.0 -6.7 aspartate carbamoyl transferase catalytic subunit compare
Atu2183 -2.0 -7.0 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4317 -2.0 -1.9 TetR family transcriptional regulator compare
Atu0039 -2.0 -2.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu4166 -1.8 -2.9 UDP-glucose 4-epimerase compare
Atu4468 -1.8 -6.4 iron transport ABC transporter permease compare
Atu0399 -1.8 -4.4 dihydroorotase compare
Atu3496 -1.7 -4.5 hypothetical protein compare
Atu3755 -1.7 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1686 -1.6 -7.3 peptidyl-prolyl cis-trans isomerse D compare
Atu3754 -1.6 -4.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3311 -1.6 -12.0 phosphomannose isomerase compare
Atu1028 -1.5 -1.2 hypothetical protein compare
Atu0026 -1.5 -1.3 hypothetical protein compare
Atu4470 -1.5 -5.6 iron ABC transporter ATPase compare
Atu0486 -1.5 -2.7 dihydroorotate dehydrogenase compare
Atu0184 -1.4 -2.4 glucokinase compare
Atu2439 -1.4 -1.5 hypothetical protein compare
Atu4471 -1.3 -9.1 ABC transporter substrate-binding protein compare
Atu0040 -1.3 -1.2 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4469 -1.3 -5.4 iron ABC transporter permease compare
Atu0842 -1.3 -1.9 hypothetical protein compare
Atu2057 -1.3 -2.4 DNA helicase II compare
Atu3763 -1.3 -2.5 hypothetical protein compare
Atu1457 -1.2 -2.1 hypothetical protein compare
Atu6165 -1.1 -0.5 hypothetical protein compare
Atu0647 -1.1 -4.3 phosphoribosylamine--glycine ligase compare
Atu2017 -1.1 -1.0 hypothetical protein compare
Atu1503 -1.1 -1.1 hypothetical protein compare
Atu2193 -1.1 -1.1 hypothetical protein compare
Atu3486 -1.0 -3.2 DeoR family transcriptional regulator compare
Atu1254 -1.0 -1.8 transcriptional regulator, ArsR family compare
Atu2237 -1.0 -4.0 cytochrome c1 compare
Atu0784 -1.0 -2.9 hypothetical protein compare
Atu1874 -1.0 -1.9 RecA protein compare
Atu3727 -1.0 -2.9 hypothetical protein compare
Atu2484 -1.0 -1.5 hypothetical protein compare
Atu8054 -1.0 -0.6 hypothetical protein compare
Atu1739 -0.9 -3.6 permease compare
Atu4144 -0.9 -1.3 hypothetical protein compare
Atu0141 -0.9 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu2640 -0.9 -3.7 hypothetical protein compare
Atu2710 -0.9 -4.0 hypothetical protein compare
Atu0386 -0.9 -1.7 hypothetical protein compare
Atu4773 -0.9 -1.3 two component response regulator compare
Atu2073 -0.9 -2.5 membrane protein compare
Atu1364 -0.9 -3.0 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0422 -0.8 -1.2 ABC transporter, membrane spanning protein compare
Atu3667 -0.8 -2.7 aspartate alpha-decarboxylase compare
Atu0467 -0.8 -2.8 hypothetical protein compare
Atu0824 -0.8 -1.1 hypothetical protein compare
Atu2746 -0.8 -1.7 hypothetical protein compare
Atu3008 -0.8 -1.3 hypothetical protein compare
Atu2207 -0.8 -2.2 two component sensor kinase compare
Atu1714 -0.7 -1.2 exonuclease III compare
Atu1983 -0.7 -2.7 hypothetical protein compare
Atu0427 -0.7 -2.9 hypothetical protein compare
Atu3469 -0.7 -1.4 phosphoglyceromutase compare
Atu1793 -0.7 -3.9 phosphatidylcholine synthase compare
Atu1845 -0.7 -3.0 phosphoribosylformylglycinamidine synthase I compare
Atu0943 -0.7 -1.5 hypothetical protein compare
Atu1140 -0.7 -3.4 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu6114 -0.7 -1.4 hypothetical protein compare
Atu1141 -0.7 -2.8 Phosphoribosylglycinamide synthetase compare
Atu1566 -0.7 -0.9 hypothetical protein compare
Atu1573 -0.7 -1.1 hypothetical protein compare
Atu1075 -0.7 -3.8 amidophosphoribosyltransferase compare
Atu3014 -0.7 -1.4 hypothetical protein compare
Atu8162 -0.7 -0.8 hypothetical protein compare
Atu0185 -0.7 -2.3 methylglyoxal synthase compare
Atu0119 -0.7 -1.0 hypothetical protein compare
Atu4896 -0.7 -2.6 acetyltransferase compare
Atu0470 -0.7 -1.7 hypothetical protein compare
Atu4897 -0.7 -1.5 hypothetical protein compare
Atu2790 -0.7 -1.7 3-isopropylmalate dehydratase, small subunit compare
Atu0142 -0.7 -1.2 cytochrome o ubiquinol oxidase subunit II compare
Atu3001 -0.6 -1.4 hypothetical protein compare
Atu1399 -0.6 -2.4 ABC transporter, substrate binding protein (amino acid) compare
Atu0972 -0.6 -2.5 lipA protein compare
Atu4306 -0.6 -2.1 two component response regulator compare
Atu0677 -0.6 -1.5 hypothetical protein compare
Atu6098 -0.6 -0.5 transcriptional regulator, HTH family compare
Atu5155 -0.6 -2.3 MarR family transcriptional regulator compare
Atu4075 -0.6 -3.0 glycogen synthase compare
Atu2728 -0.6 -2.3 beta (1-->2) glucan export ATP-binding protein compare
Atu2067 -0.6 -0.8 hypothetical protein compare
Atu0189 -0.6 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu5034 -0.6 -0.8 hypothetical protein compare
Atu2045 -0.6 -1.9 HFLK protein compare
Atu1336 -0.6 -2.3 hypothetical protein compare
Atu0388 -0.6 -4.1 two component sensor kinase compare
Atu2205 -0.6 -2.1 transcriptional regulator, MarR family compare
Atu2116 -0.6 -2.3 hypothetical protein compare
Atu1844 -0.6 -1.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1805 -0.6 -2.2 hypothetical protein compare
Atu3064 -0.6 -2.6 ABC transporter permease compare
Atu3674 -0.6 -2.2 hypothetical protein compare
Atu0953 -0.6 -0.9 hypothetical protein compare
Atu0971 -0.6 -1.6 two component sensor kinase compare
Atu1677 -0.6 -1.6 queuine tRNA-ribosyltransferase compare
Atu1099 -0.6 -3.4 hypothetical protein compare
Atu0876 -0.6 -0.5 superoxide dismutase compare
Atu4610 -0.6 -4.1 sugar nucleotide epimerase/dehydratase compare
Atu4346 -0.6 -2.1 hypothetical protein compare
Atu2692 -0.6 -1.5 intracellular septation protein compare
Atu1405 -0.6 -1.8 transcriptional regulator, GntR family compare
Atu6020 -0.6 -2.0 conserved hypothetical protein compare
Atu3121 -0.6 -1.0 cold shock protein compare
Atu1782 -0.6 -2.8 hypothetical protein compare
Atu4608 -0.6 -3.9 hypothetical protein compare
Atu2320 -0.6 -2.4 transcriptional regulator, TetR family compare
Atu0331 -0.6 -1.0 sigma-54 modulation protein compare
Atu1076 -0.6 -2.2 colicin V production protein compare
Atu8087 -0.6 -0.8 putative peptidoglycan binding protein compare
Atu1542 -0.5 -1.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4609 -0.5 -3.9 glycosyltransferase compare
Atu2682 -0.5 -2.3 hypothetical protein compare
Atu8202 -0.5 -2.1 hypothetical protein compare
Atu2805 -0.5 -2.5 cobalamin synthesis protein compare
Atu3798 -0.5 -2.8 TetR family transcriptional regulator compare
Atu1801 -0.5 -1.6 hypothetical protein compare
Atu4854 -0.5 -3.1 hypothetical protein compare
Atu1818 -0.5 -1.6 hypothetical protein compare
Atu6040 -0.5 -2.3 conjugal transfer protein compare
Atu1619 -0.5 -1.3 protein-export membrane protein SECG compare
Atu2803 -0.5 -1.4 Cobalamin biosynthesis associated protein compare
Atu0447 -0.5 -1.7 hypothetical protein compare
Atu1387 -0.5 -1.3 transcriptional regulator, GntR family compare
Atu0837 -0.5 -2.3 transcriptional regulator, MarR family compare
Atu4148 -0.5 -1.9 UDP-glucuronic acid epimerase compare
Atu0889 -0.5 -2.1 hypothetical protein compare
Atu0602 -0.5 -3.0 glutamine synthetase compare
Atu8019 -0.5 -2.2 hypothetical protein compare
Atu4894 -0.5 -2.8 transposase compare
Atu1204 -0.5 -1.7 potassium uptake protein compare
Atu0468 -0.5 -2.8 hypothetical protein compare
Atu0769 -0.5 -0.6 protoheme IX farnesyltransferase compare
Atu4094 -0.5 -2.5 hypothetical protein compare
Atu2548 -0.5 -3.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0977 -0.5 -2.2 serine protease DO-like protease compare
Atu1689 -0.5 -1.7 molybdenum cofactor biosynthesis protein C compare
Atu1113 -0.5 -2.3 dehydrogenase compare
Atu5540 -0.5 -0.5 hypothetical protein compare
Atu4635 -0.5 -1.9 hypothetical protein compare
Atu0886 -0.5 -0.5 hypothetical protein compare
Atu4852 -0.5 -1.8 hypothetical protein compare
Atu4864 -0.5 -2.6 MarR family transcriptional regulator compare
Atu0190 -0.5 -2.7 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0598 -0.5 -3.2 phosphogluconate dehydratase compare
Atu4179 -0.5 -2.8 hypothetical protein compare
Atu2660 -0.5 -1.4 hypothetical protein compare
Atu0463 -0.5 -2.5 hypothetical protein compare
Atu2799 -0.5 -1.3 precorrin-6x reductase compare
Atu3021 -0.5 -3.1 sugar ABC transporter ATPase compare
Atu0135 -0.5 -1.6 uracil phosphoribosyltransferase compare
Atu0845 -0.5 -2.5 hypothetical protein compare
Atu5468 -0.5 -0.6 hypothetical protein compare
Atu0434 -0.5 -1.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1774 -0.5 -2.3 ABC transporter, substrate binding protein (peptide) compare
Atu0690 -0.5 -1.0 hypothetical protein compare
Atu4083 -0.5 -2.4 aldose epimerase compare
Atu4711 -0.5 -2.4 two component sensor kinase compare
Atu1760 -0.5 -0.8 hypothetical protein compare
Atu2802 -0.5 -1.9 precorrin-8X methylmutase compare
Atu0236 -0.5 -1.2 hypothetical protein compare
Atu3026 -0.5 -2.3 short chain dehydrogenase compare
Atu1057 -0.4 -2.2 ADP-Ribose Pyrophosphatase compare
Atu3690 -0.4 -2.3 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu4582 -0.4 -2.0 ferredoxin compare
Atu0565 -0.4 -1.5 hypothetical protein compare
Atu4866 -0.4 -3.7 hypothetical protein compare
Atu3010 -0.4 -2.6 hypothetical protein compare
Atu4892 -0.4 -3.4 hypothetical protein compare
Atu1110 -0.4 -1.5 cytosol aminopeptidase compare
Atu4290 -0.4 -1.0 hypothetical protein compare
Atu4875 -0.4 -1.7 hypothetical protein compare
Atu4217 -0.4 -0.6 TetR family transcriptional regulator compare
Atu4869 -0.4 -1.9 hypothetical protein compare
Atu4881 -0.4 -2.3 hypothetical protein compare
Atu4176 -0.4 -2.2 hypothetical protein compare
Atu0361 -0.4 -1.0 transcriptional regulator compare
Atu2063 -0.4 -1.2 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Lithium chloride in Agrobacterium fabrum C58

For stress Lithium chloride across organisms