Experiment set4IT044 for Agrobacterium fabrum C58

Compare to:

R2A with Strontium chloride 750 mM

200 most important genes:

  gene name fitness t score description  
Atu0508 -6.8 -6.2 PH Adaption potassium efflux system conserved
Atu4616 -6.2 -3.5 dTDP-4-dehydrorhamnose reductase compare
Atu0030 -6.0 -2.0 phosphocarrier protein HPr compare
Atu8131 -5.5 -19.6 pH adaption potassium efflux system protein compare
Atu0510 -4.9 -14.4 pH adaption potassium efflux system protein compare
Atu4618 -4.3 -15.8 dTDP-rhamnose-3,5-epimerase compare
Atu3763 -4.3 -4.0 hypothetical protein compare
Atu4613 -4.2 -14.3 glycosyltransferase compare
Atu0188 -4.2 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu3353 -3.9 -11.2 mannose-1-phosphate guanylyltransferase compare
Atu0331 -3.9 -4.5 sigma-54 modulation protein compare
Atu4617 -3.8 -10.8 dTDP-D-glucose-4,6-dehydratase compare
Atu2439 -3.6 -1.7 hypothetical protein compare
Atu4615 -3.4 -9.0 glucose-1-phosphate thymidylyltransferase compare
Atu2183 -3.4 -8.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4614 -3.4 -8.5 glycosyltransferase compare
Atu4610 -3.4 -10.5 sugar nucleotide epimerase/dehydratase compare
Atu0511 -3.0 -4.5 pH adaption potassium efflux system protein compare
Atu2321 -3.0 -13.3 D-alanyl-D-alanine carboxypeptidase (penicillin binding protein) compare
Atu1687 -3.0 -7.4 anthranilate phosphoribosyltransferase compare
Atu1810 -3.0 -1.3 hypothetical protein compare
Atu1645 -2.8 -9.1 ABC transporter, substrate binding protein compare
Atu0190 -2.8 -6.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0031 -2.6 -2.3 PTS system, IIA component compare
Atu3311 -2.6 -14.8 phosphomannose isomerase compare
Atu4166 -2.5 -2.6 UDP-glucose 4-epimerase compare
Atu1646 -2.5 -4.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu3779 -2.5 -8.3 lytic murein transglycosylase compare
Atu1647 -2.4 -7.6 ABC transporter, membrane spanning protein compare
Atu2692 -2.4 -5.1 intracellular septation protein compare
Atu0388 -2.4 -11.7 two component sensor kinase compare
Atu0895 -2.4 -4.6 ABC transporter, substrate binding protein compare
Atu2682 -2.3 -5.6 hypothetical protein compare
Atu2207 -2.3 -2.5 two component sensor kinase compare
Atu0017 -2.3 -2.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1163 -2.2 -2.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1774 -2.2 -8.2 ABC transporter, substrate binding protein (peptide) compare
Atu0926 -2.2 -5.9 hypothetical protein compare
Atu1359 -2.2 -1.4 dnaK deletion suppressor protein compare
Atu4317 -2.1 -3.1 TetR family transcriptional regulator compare
Atu1030 -2.1 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1753 -2.1 -8.9 hypothetical protein compare
Atu4346 -2.1 -5.2 hypothetical protein compare
Atu1705 -2.0 -3.3 SEC-independent protein translocase protein compare
Atu2824 -2.0 -7.1 hypothetical protein compare
Atu0893 -2.0 -5.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0925 -2.0 -4.2 hypothetical protein compare
Atu0189 -2.0 -4.6 ABC transporter, membrane spanning protein (peptide) compare
Atu2289 -2.0 -9.4 anthranilate synthase component I and II compare
Atu0923 -2.0 -3.3 hypothetical protein compare
Atu6036 -1.9 -1.4 entry-exclusion protein compare
Atu0399 -1.8 -5.1 dihydroorotase compare
Atu3608 -1.8 -6.0 hypothetical protein compare
Atu0894 -1.7 -3.7 ABC transporter, membrane spanning protein compare
Atu8191 -1.7 -2.7 hypothetical protein compare
Atu1739 -1.7 -6.0 permease compare
Atu8167 -1.7 -8.5 putative transmembrane protein compare
Atu1380 -1.6 -5.9 zinc metallopeptidase compare
Atu1644 -1.6 -2.5 hypothetical protein compare
Atu4469 -1.6 -5.2 iron ABC transporter permease compare
Atu4468 -1.6 -5.2 iron transport ABC transporter permease compare
Atu1542 -1.6 -6.3 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1688 -1.5 -4.3 indole-3-glycerol-phosphate synthase compare
Atu2809 -1.5 -6.4 cobalamin biosynthesis protein compare
Atu0931 -1.5 -8.6 penicillin binding protein compare
Atu4677 -1.5 -1.2 hypothetical protein compare
Atu2807 -1.5 -5.2 cob(I)alamin adenosyltransferase compare
Atu4609 -1.5 -9.7 glycosyltransferase compare
Atu2044 -1.5 -4.6 HFLC protein compare
Atu2368 -1.5 -1.3 hypothetical protein compare
Atu2456 -1.5 -3.6 lactoylglutathione lyase compare
Atu1056 -1.5 -5.6 hypothetical protein compare
Atu2798 -1.5 -4.7 precorrin-6y methyltransferase compare
Atu2710 -1.5 -6.6 hypothetical protein compare
Atu4108 -1.4 -7.6 ribonuclease D compare
Atu0784 -1.4 -3.0 hypothetical protein compare
Atu0233 -1.4 -6.8 lysozyme compare
Atu2808 -1.4 -5.8 cobyric acid synthase compare
Atu2379 -1.4 -8.3 phosphomannomutase compare
Atu2045 -1.4 -4.2 HFLK protein compare
Atu0972 -1.4 -6.3 lipA protein compare
Atu0660 -1.4 -5.7 hydrolase compare
Atu1891 -1.4 -3.5 cobalamin biosynthesis protein compare
Atu2796 -1.4 -4.0 precorrin-4 C11-methyltransferase compare
Atu0434 -1.4 -1.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2802 -1.4 -5.6 precorrin-8X methylmutase compare
Atu2810 -1.4 -7.6 cobalamin biosynthetic protein compare
Atu1354 -1.3 -1.2 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu2804 -1.3 -6.6 cobaltochelatase subunit compare
Atu0184 -1.3 -2.7 glucokinase compare
Atu1251 -1.2 -6.6 O-acetylhomoserine sulfhydrylase compare
Atu2799 -1.2 -4.0 precorrin-6x reductase compare
Atu4471 -1.2 -6.1 ABC transporter substrate-binding protein compare
Atu0479 -1.2 -4.2 ABC transporter, substrate binding protein (amino acid) compare
Atu2803 -1.2 -2.4 Cobalamin biosynthesis associated protein compare
Atu3886 -1.2 -5.7 lysophospholipase compare
Atu0026 -1.2 -1.1 hypothetical protein compare
Atu0507 -1.2 -1.4 potassium efflux system protein compare
Atu4608 -1.2 -7.8 hypothetical protein compare
Atu0499 -1.2 -5.8 hypothetical protein compare
Atu3249 -1.2 -5.7 septum formation inhibitor compare
Atu1028 -1.2 -2.7 hypothetical protein compare
Atu0977 -1.2 -2.3 serine protease DO-like protease compare
Atu1686 -1.2 -5.9 peptidyl-prolyl cis-trans isomerse D compare
Atu0361 -1.2 -2.8 transcriptional regulator compare
Atu2801 -1.2 -2.9 precorrin-2 C20 methyltransferase compare
Atu1662 -1.2 -5.6 hypothetical protein compare
Atu0535 -1.1 -4.0 hypothetical protein compare
Atu0677 -1.1 -1.6 hypothetical protein compare
Atu2795 -1.1 -5.7 cobalamin biosynthetic protein compare
Atu2800 -1.1 -2.6 precorrin-3B C17-methyltransferase compare
Atu2793 -1.1 -3.6 cobyrinic acid a,c-diamide synthase compare
Atu0503 -1.1 -7.7 enoyl-CoA hydratase compare
Atu0712 -1.1 -8.2 hypothetical protein compare
Atu2805 -1.1 -3.1 cobalamin synthesis protein compare
Atu0298 -1.1 -3.8 orotidine 5 compare
Atu3593 -1.1 -5.5 hypothetical protein compare
Atu2432 -1.1 -2.2 hypothetical protein compare
Atu3603 -1.1 -1.2 two component response regulator compare
Atu1140 -1.0 -4.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0687 -1.0 -2.2 hypothetical protein compare
Atu1076 -1.0 -3.0 colicin V production protein compare
Atu3755 -1.0 -3.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu4470 -1.0 -4.3 iron ABC transporter ATPase compare
Atu3754 -1.0 -2.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3634 -1.0 -3.3 penicillin-binding protein dacf precursor compare
Atu4792 -1.0 -1.6 hypothetical protein compare
Atu0486 -1.0 -2.8 dihydroorotate dehydrogenase compare
Atu0354 -1.0 -2.3 ferric uptake regulator compare
Atu0119 -1.0 -1.2 hypothetical protein compare
Atu3730 -1.0 -0.8 hypothetical protein compare
Atu5125 -1.0 -2.4 GntR family transcriptional regulator compare
Atu2325 -1.0 -2.1 hypothetical protein compare
Atu1845 -0.9 -3.1 phosphoribosylformylglycinamidine synthase I compare
Atu0039 -0.9 -1.7 imidazoleglycerol-phosphate synthase cyclase compare
Atu3075 -0.9 -3.3 TetR family transcriptional regulator compare
Atu0501 -0.9 -6.2 acyl-CoA dehydrogenase compare
Atu0400 -0.9 -2.4 orotate phosphoribosyltransferase compare
Atu1285 -0.9 -3.0 metal dependent hydrolase compare
Atu1760 -0.9 -1.2 hypothetical protein compare
Atu3780 -0.9 -2.8 hypothetical protein compare
Atu1307 -0.9 -3.3 dihydroorotase compare
Atu8190 -0.9 -3.0 hypothetical protein compare
Atu1499 -0.9 -4.6 penicillin binding protein compare
Atu1495 -0.9 -2.9 hypothetical protein compare
Atu0467 -0.9 -2.3 hypothetical protein compare
Atu3343 -0.8 -4.3 trehalose utilization-like protein compare
Atu2320 -0.8 -2.0 transcriptional regulator, TetR family compare
Atu0040 -0.8 -0.7 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1141 -0.8 -2.4 Phosphoribosylglycinamide synthetase compare
Atu4029 -0.8 -3.3 gluconolactonase compare
Atu0598 -0.8 -3.5 phosphogluconate dehydratase compare
Atu0043 -0.8 -1.7 imidazoleglycerol-phosphate dehydratase compare
Atu2554 -0.8 -1.6 lysyl-tRNA synthetase compare
Atu2114 -0.8 -2.8 molecular chaperone, DnaJ family compare
Atu0471 -0.8 -1.9 hypothetical protein compare
Atu1127 -0.8 -1.8 molybdopterin converting factor small subunit compare
Atu0979 -0.8 -3.6 two component sensor kinase compare
Atu2722 -0.8 -3.5 porin compare
Atu0659 -0.8 -2.2 NTP pyrophosphohydrolase, MutT family compare
Atu0638 -0.8 -1.5 hypothetical protein compare
Atu0007 -0.8 -3.6 hypothetical protein compare
Atu0142 -0.8 -1.6 cytochrome o ubiquinol oxidase subunit II compare
Atu0533 -0.8 -2.0 putative inhibitor of septum formation compare
Atu1204 -0.8 -2.8 potassium uptake protein compare
Atu5160 -0.8 -1.8 transcriptional regulator protein compare
Atu5540 -0.8 -0.7 hypothetical protein compare
Atu0769 -0.8 -1.2 protoheme IX farnesyltransferase compare
Atu3727 -0.7 -2.9 hypothetical protein compare
Atu1621 -0.7 -4.3 hypothetical protein compare
Atu4884 -0.7 -2.2 hypothetical protein compare
Atu3248 -0.7 -3.6 cell division inhibitor compare
Atu2615 -0.7 -4.2 hypothetical protein compare
Atu3014 -0.7 -1.0 hypothetical protein compare
Atu1701 -0.7 -1.2 protein-L-isoaspartate O-methyltransferase compare
Atu8143 -0.7 -1.9 hypothetical protein compare
Atu0322 -0.7 -2.4 enoyl CoA hydratase compare
Atu3697 -0.7 -2.5 ATP-dependent protease LA 2 compare
Atu1308 -0.7 -2.6 aspartate carbamoyl transferase catalytic subunit compare
Atu1850 -0.7 -1.7 phosphoribosylformylglycinamidine synthetase II compare
Atu3342 -0.7 -2.8 trehalose utilization-like protein compare
Atu1725 -0.7 -1.4 hypothetical protein compare
Atu3707 -0.7 -1.2 phosphoserine aminotransferase compare
Atu5513 -0.7 -1.6 cold shock protein compare
Atu1546 -0.7 -2.2 transcriptional regulator, MerR family compare
Atu5088 -0.7 -1.9 hypothetical protein compare
Atu0947 -0.7 -1.8 transcriptional regulator, AsnC family compare
Atu6189 -0.7 -0.9 protein secretion chaperone compare
Atu2237 -0.7 -2.5 cytochrome c1 compare
Atu4838 -0.7 -3.4 outer membrane lipoprotein compare
Atu0908 -0.7 -1.4 transcriptional regulator compare
Atu0073 -0.7 -2.4 recF-like protein compare
Atu1447 -0.7 -1.5 two component sensor kinase compare
Atu0658 -0.7 -3.5 phosphate permease compare
Atu0464 -0.7 -3.2 hypothetical protein compare
Atu1189 -0.7 -2.1 hypothetical protein compare
Atu1685 -0.7 -0.6 hypothetical protein compare
Atu0124 -0.7 -1.9 hypothetical protein compare
Atu2020 -0.7 -1.8 transcriptional regulator, TetR family compare
Atu2582 -0.7 -2.0 UDP-glucose/GDP-mannose dehydrogenase compare


Specific Phenotypes

For 20 genes in this experiment

For stress Strontium chloride in Agrobacterium fabrum C58

For stress Strontium chloride across organisms