Experiment set4IT041 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium m-arsenite 0.8 mM

Genes with specific phenotypes:

  gene name fitness t score description  
Atu1492 -4.4 -5.6 transcriptional regulator, ArsR family compare
Atu1380 -4.0 -6.1 zinc metallopeptidase compare
Atu1491 -3.8 -5.7 sodium bile acid symporter family protein conserved
Atu1489 -3.7 -7.7 arsenical resistance protein conserved
Atu4501 -3.3 -9.5 hypothetical protein compare
Atu3791 -3.3 -7.9 L-asparaginase compare
Atu1285 -3.1 -5.6 metal dependent hydrolase compare
Atu0272 -3.0 -6.4 transcriptional regulator, MarR family compare
Atu0595 -3.0 -8.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu4199 -2.5 -8.5 TetR family transcriptional regulator compare
Atu3180 -2.5 -5.3 ABC transporter permease compare
Atu0591 -2.5 -10.7 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu1258 -2.4 -6.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu2768 -2.3 -6.0 hypothetical protein compare
Atu1526 -2.2 -8.2 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu2489 -2.2 -7.7 hypothetical protein compare
Atu0592 -2.1 -7.5 ABC transporter, membrane spanning protein compare
Atu4116 -2.0 -6.7 dipeptide ABC transporter ATPase compare
Atu1544 -2.0 -7.0 hypothetical protein compare
Atu1177 -1.9 -5.2 hypothetical protein compare
Atu0405 -1.9 -11.5 long-chain-fatty-acid-CoA-ligase compare
Atu0649 -1.8 -6.6 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu0015 -1.8 -5.4 intracellular PHB depolymerase compare
Atu3179 -1.8 -6.8 ABC transporter permease compare
Atu4743 -1.7 -5.6 LacI family transcriptional regulator compare
Atu4373 -1.7 -6.0 LacI family transcriptional regulator compare
Atu2766 -1.7 -11.0 NAD-glutamate dehydrogenase compare
Atu1064 -1.7 -7.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3878 -1.6 -7.3 transcriptional regulator compare
Atu3799 -1.6 -8.4 GntR family transcriptional regulator compare
Atu0594 -1.6 -5.8 alpha-glucosidase compare
Atu4226 -1.5 -5.3 transcriptional regulator compare
Atu0498 -1.5 -5.6 hypothetical protein compare
Atu2713 -1.5 -9.3 ABC transporter, membrane spanning protein (thiamine) compare
Atu2714 -1.5 -6.5 ABC transporter, substrate binding protein (thiamine) compare
Atu8130 -1.4 -6.4 hypothetical protein compare
Atu4113 -1.4 -5.3 dipeptide ABC transporter substrate-binding protein compare
Atu1867 -1.3 -5.6 glutamate racemase compare
Atu3738 -1.3 -7.3 potassium/proton antiporter compare
Atu8147 -1.2 -6.3 hypothetical protein compare
Atu4083 -1.2 -5.8 aldose epimerase compare
Atu0066 -1.1 -5.1 putative kinase compare
Atu3498 -1.1 -5.7 aldehyde dehydrogenase compare
Atu2753 -1.1 -5.9 ATP-dependent helicase compare
Atu0213 -1.1 -5.8 nicotinate phosphoribosyltransferase compare
Atu4426 -1.1 -5.8 adenine deaminase compare
Atu0657 -1.0 -5.3 hypothetical protein compare
Atu0804 +1.0 7.3 proton/glutamate transport protein compare
Atu4522 +1.0 6.7 hypothetical protein compare
Atu4157 +1.1 8.5 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
Atu0611 +1.1 5.1 ABC transporter, membrane spanning protein compare
Atu0995 +1.2 7.3 hypothetical protein compare
Atu0609 +1.2 8.6 ABC transporter, substrate binding protein (putrescine) compare
Atu3519 +1.3 7.2 peptidyl-prolyl cis-trans isomerase compare
Atu1601 +1.3 8.1 oxygen-independent coproporphyrinogen III oxidase compare
Atu1467 +1.3 6.1 hypothetical protein compare
Atu0302 +1.4 8.5 tetrapyrrole methylase family protein compare
Atu1764 +1.4 8.8 methylenetetrahydrofolate reductase compare
Atu1530 +1.4 9.6 nitrogen fixation protein FixG compare
Atu2483 +1.5 10.2 AcrB/AcrD/AcrF family protein compare
Atu1534 +1.5 6.4 cytochrome-c oxidase, FixP chain compare
Atu1788 +1.6 10.6 transcriptional regulator, GntR family compare
Atu0008 +1.7 6.7 hypothetical protein compare
Atu1536 +1.8 7.2 cytochrome C oxidase, FixO chain compare
Atu1529 +1.8 11.0 nitrogen fixation protein FixH compare
Atu4471 +1.8 11.9 ABC transporter substrate-binding protein compare
Atu0689 +1.9 12.8 ribosomal large subunit pseudouridine synthase B compare
Atu4078 +1.9 12.9 glycogen phosphorylase compare
Atu4470 +2.0 9.9 iron ABC transporter ATPase compare
Atu2442 +2.0 8.0 hypothetical protein compare
Atu1444 +2.0 5.0 nitrogen regulation protein compare
Atu2480 +2.4 12.7 transcriptional regulator, LysR family compare
Atu2481 +2.4 18.6 lipase esterase compare
Atu2482 +2.4 17.7 HlyD family secretion protein compare
Atu0328 +2.7 17.6 heat-inducible transcription repressor compare
Atu2348 +3.1 17.2 sugar binding protein compare
Atu4077 +5.4 34.5 glycogen branching protein compare


Specific phenotypes for stress Sodium m-arsenite across organisms