Experiment set4IT041 for Agrobacterium fabrum C58

Compare to:

R2A with Sodium m-arsenite 0.8 mM

200 most important genes:

  gene name fitness t score description  
Atu1490 -6.1 -2.3 arsenate reductase compare
Atu0331 -5.1 -3.4 sigma-54 modulation protein compare
Atu2821 -4.9 -5.8 transcriptional regulator, GntR family compare
Atu1492 -4.4 -5.6 transcriptional regulator, ArsR family compare
Atu1380 -4.0 -6.1 zinc metallopeptidase compare
Atu2710 -3.9 -9.1 hypothetical protein compare
Atu1491 -3.8 -5.7 sodium bile acid symporter family protein conserved
Atu1489 -3.7 -7.7 arsenical resistance protein conserved
Atu1904 -3.7 -6.6 transcriptional regulator compare
Atu0062 -3.6 -12.3 transcriptional regulator, ROK family compare
Atu1030 -3.5 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3613 -3.4 -9.4 hypothetical protein compare
Atu0030 -3.4 -1.8 phosphocarrier protein HPr compare
Atu4173 -3.4 -2.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu3794 -3.3 -8.5 FadR family transcriptional regulator compare
Atu4501 -3.3 -9.5 hypothetical protein compare
Atu3791 -3.3 -7.9 L-asparaginase compare
Atu3634 -3.2 -6.5 penicillin-binding protein dacf precursor compare
Atu3763 -3.1 -2.2 hypothetical protein compare
Atu0602 -3.1 -10.2 glutamine synthetase compare
Atu0190 -3.1 -7.1 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1285 -3.1 -5.6 metal dependent hydrolase compare
Atu0272 -3.0 -6.4 transcriptional regulator, MarR family compare
Atu0354 -3.0 -2.1 ferric uptake regulator compare
Atu0595 -3.0 -8.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu1739 -3.0 -4.9 permease compare
Atu0769 -2.9 -2.0 protoheme IX farnesyltransferase compare
Atu0188 -2.9 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu4502 -2.9 -4.8 cobalamin synthesis protein compare
Atu3697 -2.8 -4.6 ATP-dependent protease LA 2 compare
Atu0401 -2.7 -7.4 fructokinase compare
Atu0525 -2.7 -5.1 transcriptional regulator, LuxR family compare
Atu2684 -2.6 -1.6 hypothetical protein compare
Atu4199 -2.5 -8.5 TetR family transcriptional regulator compare
Atu3180 -2.5 -5.3 ABC transporter permease compare
Atu0591 -2.5 -10.7 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0031 -2.5 -1.8 PTS system, IIA component compare
Atu1774 -2.5 -6.3 ABC transporter, substrate binding protein (peptide) compare
Atu0184 -2.4 -2.9 glucokinase compare
Atu4505 -2.4 -9.3 LacI family transcriptional regulator compare
Atu0972 -2.4 -7.2 lipA protein compare
Atu1258 -2.4 -6.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu2768 -2.3 -6.0 hypothetical protein compare
Atu1526 -2.2 -8.2 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu0189 -2.2 -4.2 ABC transporter, membrane spanning protein (peptide) compare
Atu1359 -2.2 -1.1 dnaK deletion suppressor protein compare
Atu2832 -2.2 -4.4 tRNA modification GTPase compare
Atu2489 -2.2 -7.7 hypothetical protein compare
Atu0368 -2.1 -5.2 tRNA pseudouridine synthase I compare
Atu0592 -2.1 -7.5 ABC transporter, membrane spanning protein compare
Atu3712 -2.1 -1.8 hypothetical protein compare
Atu1028 -2.1 -1.9 hypothetical protein compare
Atu3815 -2.1 -4.7 GntR family transcriptional regulator compare
Atu0153 -2.1 -4.6 transcriptional regulator, Fur family compare
Atu6114 -2.0 -2.6 hypothetical protein compare
Atu1685 -2.0 -1.0 hypothetical protein compare
Atu4116 -2.0 -6.7 dipeptide ABC transporter ATPase compare
Atu2067 -2.0 -1.3 hypothetical protein compare
Atu1518 -2.0 -3.8 transcriptional regulator, Fur family compare
Atu1544 -2.0 -7.0 hypothetical protein compare
Atu2274 -2.0 -6.0 cation efflux system protein compare
Atu3706 -1.9 -7.3 D-3-phosphoglycerate dehydrogenase compare
Atu2633 -1.9 -1.6 RhtB family transporter compare
Atu8054 -1.9 -0.7 hypothetical protein compare
Atu1177 -1.9 -5.2 hypothetical protein compare
Atu0405 -1.9 -11.5 long-chain-fatty-acid-CoA-ligase compare
Atu0524 -1.8 -5.3 transcriptional regulator, LuxR family compare
Atu2114 -1.8 -4.1 molecular chaperone, DnaJ family compare
Atu0649 -1.8 -6.6 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu1620 -1.8 -8.1 triosephosphate isomerase compare
Atu4115 -1.8 -4.3 dipeptide ABC transporter permease compare
Atu1647 -1.8 -5.0 ABC transporter, membrane spanning protein compare
Atu0015 -1.8 -5.4 intracellular PHB depolymerase compare
Atu3179 -1.8 -6.8 ABC transporter permease compare
Atu2200 -1.8 -2.9 cold shock protein compare
Atu1163 -1.7 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4743 -1.7 -5.6 LacI family transcriptional regulator compare
Atu4446 -1.7 -5.8 hypothetical protein compare
Atu4373 -1.7 -6.0 LacI family transcriptional regulator compare
Atu0185 -1.7 -3.9 methylglyoxal synthase compare
Atu2766 -1.7 -11.0 NAD-glutamate dehydrogenase compare
Atu2682 -1.7 -4.0 hypothetical protein compare
Atu1064 -1.7 -7.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3963 -1.7 -4.8 GntR family transcriptional regulator compare
Atu3878 -1.6 -7.3 transcriptional regulator compare
Atu3663 -1.6 -1.3 hypothetical protein compare
Atu0593 -1.6 -4.7 ABC transporter, membrane spanning protein compare
Atu8053 -1.6 -2.2 hypothetical protein compare
Atu3799 -1.6 -8.4 GntR family transcriptional regulator compare
Atu0594 -1.6 -5.8 alpha-glucosidase compare
Atu3707 -1.5 -1.7 phosphoserine aminotransferase compare
Atu4226 -1.5 -5.3 transcriptional regulator compare
Atu0498 -1.5 -5.6 hypothetical protein compare
Atu2713 -1.5 -9.3 ABC transporter, membrane spanning protein (thiamine) compare
Atu2714 -1.5 -6.5 ABC transporter, substrate binding protein (thiamine) compare
Atu3798 -1.5 -3.7 TetR family transcriptional regulator compare
Atu4114 -1.5 -4.0 dipeptide ABC transporter permease compare
Atu3511 -1.5 -2.3 glutaredoxin compare
Atu4112 -1.5 -4.7 proline dipeptidase compare
Atu5164 -1.4 -0.7 type IV secretion protein AvhB3 compare
Atu2745 -1.4 -7.8 acetyl-coenzyme A synthetase compare
Atu0071 -1.4 -4.0 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu1902 -1.4 -3.1 transketolase compare
Atu1307 -1.4 -3.2 dihydroorotase compare
Atu0908 -1.4 -1.9 transcriptional regulator compare
Atu8130 -1.4 -6.4 hypothetical protein compare
Atu0947 -1.4 -4.1 transcriptional regulator, AsnC family compare
Atu3609 -1.4 -3.8 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Atu4113 -1.4 -5.3 dipeptide ABC transporter substrate-binding protein compare
Atu1213 -1.3 -2.1 hypothetical protein compare
Atu0946 -1.3 -3.8 dehydrogenase compare
Atu1354 -1.3 -1.0 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1867 -1.3 -5.6 glutamate racemase compare
Atu3698 -1.3 -2.9 thioredoxin compare
Atu4896 -1.3 -2.5 acetyltransferase compare
Atu2712 -1.3 -4.6 ABC transporter, nucleotide binding/ATPase protein (thiamine) compare
Atu3738 -1.3 -7.3 potassium/proton antiporter compare
Atu3497 -1.3 -3.6 hypothetical protein compare
Atu1369 -1.3 -2.1 HIT family protein compare
Atu1770 -1.3 -4.9 glutamine synthetase compare
Atu2747 -1.3 -6.0 hypothetical protein compare
Atu0435 -1.3 -2.1 tRNA-Gly compare
Atu4702 -1.3 -4.6 GntR family transcriptional regulator compare
Atu2267 -1.3 -4.5 hypothetical protein compare
Atu5061 -1.2 -1.9 glycerophosphoryl diester phosphodiesterase compare
Atu4671 -1.2 -1.8 response regulator compare
Atu4346 -1.2 -4.3 hypothetical protein compare
Atu8147 -1.2 -6.3 hypothetical protein compare
Atu4083 -1.2 -5.8 aldose epimerase compare
Atu3469 -1.2 -1.2 phosphoglyceromutase compare
Atu0070 -1.2 -5.5 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu0981 -1.2 -5.6 glutamate-ammonia-ligase adenylyltransferase compare
Atu0779 -1.2 -3.4 peroxiredoxin compare
Atu1606 -1.2 -2.1 methionine aminopeptidase compare
Atu4567 -1.2 -3.8 ROK family transcriptional regulator compare
Atu5464 -1.2 -5.0 IclR family transcriptional regulator compare
Atu1302 -1.2 -2.2 hypothetical protein compare
Atu3162 -1.2 -3.7 LacI family transcriptional regulator compare
Atu1646 -1.2 -3.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1242 -1.2 -5.5 cytochrome oxidase assembly factor compare
Atu0066 -1.1 -5.1 putative kinase compare
Atu4117 -1.1 -2.5 dipeptide ABC transporter ATPase compare
Atu0361 -1.1 -2.5 transcriptional regulator compare
Atu3017 -1.1 -1.1 phosphoglyceromutase compare
Atu3498 -1.1 -5.7 aldehyde dehydrogenase compare
Atu2831 -1.1 -3.4 glucose inhibited division protein A compare
Atu3577 -1.1 -4.8 transcriptional regulator compare
Atu2511 -1.1 -4.2 D-alanine aminotransferase compare
Atu2753 -1.1 -5.9 ATP-dependent helicase compare
Atu0213 -1.1 -5.8 nicotinate phosphoribosyltransferase compare
Atu4426 -1.1 -5.8 adenine deaminase compare
Atu0698 -1.1 -2.0 hypothetical protein compare
Atu4451 -1.1 -5.1 mannitol 2-dehydrogenase compare
Atu4075 -1.1 -4.1 glycogen synthase compare
Atu1570 -1.1 -0.9 hypothetical protein compare
Atu0809 -1.1 -1.1 hypothetical protein compare
Atu1217 -1.1 -3.9 cysteine synthase compare
Atu2428 -1.1 -3.5 exopolysaccharide production protein PssB compare
Atu3291 -1.1 -2.4 Lpr family transcriptional regulator compare
Atu5088 -1.0 -1.7 hypothetical protein compare
Atu3619 -1.0 -1.7 hypothetical protein compare
Atu1645 -1.0 -4.1 ABC transporter, substrate binding protein compare
Atu8159 -1.0 -2.2 hypothetical protein compare
Atu1566 -1.0 -0.5 hypothetical protein compare
Atu8087 -1.0 -0.9 putative peptidoglycan binding protein compare
Atu0657 -1.0 -5.3 hypothetical protein compare
Atu2394 -1.0 -4.0 Regulator of Biofilm formation, Fnr Family compare
Atu3764 -1.0 -4.7 sigma 54 dependent transcriptional activator compare
Atu5515 -1.0 -2.9 hypothetical protein compare
Atu3201 -1.0 -5.6 TetR family transcriptional regulator compare
Atu4685 -1.0 -3.1 LacI family transcriptional regulator compare
Atu2537 -1.0 -3.3 transcriptional regulator, TetR family compare
Atu5485 -1.0 -1.2 hypothetical protein compare
Atu2350 -1.0 -4.5 transcriptional regulator, LysR family compare
Atu0048 -1.0 -5.3 hypothetical protein compare
Atu1701 -1.0 -1.1 protein-L-isoaspartate O-methyltransferase compare
Atu1801 -1.0 -1.8 hypothetical protein compare
Atu3183 -1.0 -0.6 hypothetical protein compare
Atu1308 -1.0 -2.4 aspartate carbamoyl transferase catalytic subunit compare
Atu2692 -1.0 -2.2 intracellular septation protein compare
Atu4643 -1.0 -2.2 hypothetical protein compare
Atu3908 -1.0 -5.2 GntR family transcriptional regulator compare
Atu5045 -1.0 -0.9 hypothetical protein compare
Atu3933 -0.9 -5.6 histidine ammonia-lyase compare
Atu3443 -0.9 -1.8 hypothetical protein compare
Atu3506 -0.9 -2.0 hypothetical protein compare
Atu0837 -0.9 -2.5 transcriptional regulator, MarR family compare
Atu3759 -0.9 -1.0 hypothetical protein compare
Atu3293 -0.9 -3.5 D-amino acid dehydrogenase small subunit compare
Atu3532 -0.9 -2.3 GntR family transcriptional regulator compare
Atu2746 -0.9 -1.8 hypothetical protein compare
Atu2077 -0.9 -1.3 DNA polymerase III, epsilon subunit compare
Atu3614 -0.9 -4.4 glyoxalase II compare
Atu0282 -0.9 -2.8 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase compare
Atu0640 -0.9 -1.4 hypothetical protein compare
Atu1805 -0.9 -2.0 hypothetical protein compare
Atu5475 -0.9 -0.9 hypothetical protein compare
Atu8031 -0.9 -2.7 hypothetical protein compare
Atu2660 -0.9 -3.3 hypothetical protein compare
Atu1286 -0.9 -2.9 hypothetical protein compare


Specific Phenotypes

For 77 genes in this experiment

For stress Sodium m-arsenite in Agrobacterium fabrum C58

For stress Sodium m-arsenite across organisms