Experiment set4IT039 for Agrobacterium fabrum C58

Compare to:

R2A with Cesium chloride 1.75 mM

200 most important genes:

  gene name fitness t score description  
Atu2684 -4.3 -2.9 hypothetical protein compare
Atu0434 -3.7 -4.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1446 -3.7 -4.3 two component response regulator compare
Atu1030 -3.3 -2.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0017 -3.2 -3.1 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1308 -3.2 -8.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1687 -2.3 -6.7 anthranilate phosphoribosyltransferase compare
Atu2289 -2.2 -12.2 anthranilate synthase component I and II compare
Atu1307 -2.2 -4.7 dihydroorotase compare
Atu2464 -2.1 -3.9 formyltetrahydrofolate deformylase compare
Atu0399 -2.1 -7.6 dihydroorotase compare
Atu0486 -1.9 -4.4 dihydroorotate dehydrogenase compare
Atu0298 -1.9 -6.8 orotidine 5 compare
Atu0400 -1.9 -4.7 orotate phosphoribosyltransferase compare
Atu0421 -1.8 -2.0 ABC transporter, membrane spanning protein compare
Atu0971 -1.7 -4.5 two component sensor kinase compare
Atu0103 -1.5 -6.9 penicillin-binding protein compare
Atu3011 -1.5 -3.8 ArsR family transcriptional regulator compare
Atu5088 -1.5 -2.8 hypothetical protein compare
Atu2067 -1.5 -1.6 hypothetical protein compare
Atu2710 -1.5 -6.3 hypothetical protein compare
Atu1028 -1.5 -3.4 hypothetical protein compare
Atu0346 -1.4 -3.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0977 -1.4 -4.8 serine protease DO-like protease compare
Atu0189 -1.4 -4.0 ABC transporter, membrane spanning protein (peptide) compare
Atu4072 -1.3 -1.9 nodulation protein N compare
Atu0972 -1.3 -4.3 lipA protein compare
Atu3727 -1.3 -4.2 hypothetical protein compare
Atu1686 -1.3 -7.5 peptidyl-prolyl cis-trans isomerse D compare
Atu3739 -1.3 -2.8 phosphoglycerate kinase compare
Atu0190 -1.3 -6.8 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3120 -1.3 -1.5 hypothetical protein compare
Atu1182 -1.2 -1.9 hypothetical protein compare
Atu1714 -1.2 -1.7 exonuclease III compare
Atu4890 -1.2 -2.0 IS426 transposase compare
Atu3032 -1.2 -2.0 hypothetical protein compare
Atu2799 -1.1 -4.3 precorrin-6x reductase compare
Atu8054 -1.1 -0.8 hypothetical protein compare
Atu1688 -1.1 -3.5 indole-3-glycerol-phosphate synthase compare
Atu0086 -1.1 -1.1 ribosome-binding factor A compare
Atu2728 -1.1 -3.4 beta (1-->2) glucan export ATP-binding protein compare
Atu1075 -1.1 -5.6 amidophosphoribosyltransferase compare
Atu0953 -1.1 -1.4 hypothetical protein compare
Atu4217 -1.1 -1.8 TetR family transcriptional regulator compare
Atu1774 -1.1 -5.9 ABC transporter, substrate binding protein (peptide) compare
Atu2057 -1.0 -2.1 DNA helicase II compare
Atu1110 -1.0 -2.4 cytosol aminopeptidase compare
Atu1874 -1.0 -2.1 RecA protein compare
Atu3755 -1.0 -3.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3754 -1.0 -4.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2809 -1.0 -5.5 cobalamin biosynthesis protein compare
Atu1542 -1.0 -4.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu2805 -1.0 -3.8 cobalamin synthesis protein compare
Atu4896 -1.0 -2.6 acetyltransferase compare
Atu4166 -1.0 -2.3 UDP-glucose 4-epimerase compare
Atu3013 -1.0 -4.8 hypothetical protein compare
Atu3012 -1.0 -1.8 hypothetical protein compare
Atu8138 -1.0 -1.6 hypothetical protein compare
Atu2442 -1.0 -2.4 hypothetical protein compare
Atu0040 -1.0 -1.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3634 -1.0 -4.2 penicillin-binding protein dacf precursor compare
Atu2808 -0.9 -4.4 cobyric acid synthase compare
Atu2807 -0.9 -3.6 cob(I)alamin adenosyltransferase compare
Atu3001 -0.9 -2.6 hypothetical protein compare
Atu2802 -0.9 -4.5 precorrin-8X methylmutase compare
Atu0188 -0.9 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu2040 -0.9 -4.2 phosphoserine phosphatase compare
Atu0769 -0.9 -1.0 protoheme IX farnesyltransferase compare
Atu4773 -0.9 -1.4 two component response regulator compare
Atu0647 -0.9 -4.2 phosphoribosylamine--glycine ligase compare
Atu1644 -0.9 -2.1 hypothetical protein compare
Atu0030 -0.9 -1.3 phosphocarrier protein HPr compare
Atu1140 -0.9 -3.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu5430 -0.9 -1.1 hypothetical protein compare
Atu1141 -0.9 -3.3 Phosphoribosylglycinamide synthetase compare
Atu0690 -0.9 -1.9 hypothetical protein compare
Atu2073 -0.9 -2.7 membrane protein compare
Atu2640 -0.9 -3.6 hypothetical protein compare
Atu2804 -0.8 -4.8 cobaltochelatase subunit compare
Atu1801 -0.8 -2.9 hypothetical protein compare
Atu2798 -0.8 -2.5 precorrin-6y methyltransferase compare
Atu3009 -0.8 -0.9 exopolysaccharide production protein compare
Atu2793 -0.8 -3.6 cobyrinic acid a,c-diamide synthase compare
Atu0025 -0.8 -1.2 hypothetical protein compare
Atu0538 -0.8 -3.0 hypothetical protein compare
Atu2801 -0.8 -3.0 precorrin-2 C20 methyltransferase compare
Atu4884 -0.8 -3.3 hypothetical protein compare
Atu4887 -0.8 -4.3 hypothetical protein compare
Atu3017 -0.8 -1.4 phosphoglyceromutase compare
Atu1364 -0.8 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4893 -0.8 -3.0 hypothetical protein compare
Atu0184 -0.8 -2.2 glucokinase compare
Atu3707 -0.8 -1.8 phosphoserine aminotransferase compare
Atu0467 -0.8 -3.6 hypothetical protein compare
Atu4897 -0.8 -1.9 hypothetical protein compare
Atu2683 -0.8 -1.3 hypothetical protein compare
Atu4894 -0.8 -4.5 transposase compare
Atu3008 -0.8 -1.2 hypothetical protein compare
Atu0976 -0.8 -1.9 cycL protein compare
Atu2796 -0.8 -3.2 precorrin-4 C11-methyltransferase compare
Atu0331 -0.8 -2.1 sigma-54 modulation protein compare
Atu0876 -0.7 -0.9 superoxide dismutase compare
Atu8194 -0.7 -1.9 hypothetical protein compare
Atu3006 -0.7 -2.7 hypothetical protein compare
Atu0845 -0.7 -2.7 hypothetical protein compare
Atu4880 -0.7 -5.1 AraC family transcriptional regulator compare
Atu4873 -0.7 -3.8 TetR family transcriptional regulator compare
Atu1163 -0.7 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3510 -0.7 -2.2 amidohydrolase compare
Atu4567 -0.7 -3.4 ROK family transcriptional regulator compare
Atu4877 -0.7 -4.9 short-chain dehydrogenase compare
Atu8190 -0.7 -3.9 hypothetical protein compare
Atu3730 -0.7 -1.0 hypothetical protein compare
Atu0723 -0.7 -1.5 FAD dependent oxidoreductase compare
Atu1052 -0.7 -2.1 hypothetical protein compare
Atu3020 -0.7 -4.8 GntR family transcriptional regulator compare
Atu4854 -0.7 -4.1 hypothetical protein compare
Atu3014 -0.7 -2.0 hypothetical protein compare
Atu4892 -0.7 -4.8 hypothetical protein compare
Atu4418 -0.7 -3.3 glutaryl-CoA dehydrogenase compare
Atu5471 -0.7 -1.8 hypothetical protein compare
Atu4468 -0.7 -3.1 iron transport ABC transporter permease compare
Atu4867 -0.7 -3.4 hypothetical protein compare
Atu0598 -0.7 -3.8 phosphogluconate dehydratase compare
Atu2267 -0.7 -4.1 hypothetical protein compare
Atu4888 -0.7 -2.6 hypothetical protein compare
Atu4837 -0.7 -2.0 hypothetical protein compare
Atu4889 -0.7 -2.7 hypothetical protein compare
Atu4878 -0.7 -1.8 hypothetical protein compare
Atu1620 -0.7 -4.3 triosephosphate isomerase compare
Atu0943 -0.7 -1.5 hypothetical protein compare
Atu2199 -0.7 -4.0 permease compare
Atu0535 -0.7 -2.8 hypothetical protein compare
Atu0693 -0.7 -3.7 PmbA/TldD related protein compare
Atu3034 -0.7 -3.6 ROK family transcriptional regulator compare
Atu2207 -0.7 -2.9 two component sensor kinase compare
Atu1891 -0.7 -1.4 cobalamin biosynthesis protein compare
Atu3469 -0.7 -1.4 phosphoglyceromutase compare
Atu2650 -0.7 -4.5 glycerol-3-phosphate dehydrogenase compare
Atu2567 -0.7 -2.7 thiamin biosynthesis protein ThiG compare
Atu1405 -0.7 -3.4 transcriptional regulator, GntR family compare
Atu1468 -0.7 -3.2 hypothetical protein compare
Atu0031 -0.7 -1.2 PTS system, IIA component compare
Atu3481 -0.6 -2.1 enoyl-CoA hydratase compare
Atu1902 -0.6 -2.8 transketolase compare
Atu1445 -0.6 -2.4 two component sensor kinase compare
Atu2063 -0.6 -1.1 hypothetical protein compare
Atu2795 -0.6 -3.6 cobalamin biosynthetic protein compare
Atu1387 -0.6 -1.0 transcriptional regulator, GntR family compare
Atu3593 -0.6 -3.5 hypothetical protein compare
Atu5106 -0.6 -1.9 DNA binding protein compare
Atu1515 -0.6 -2.0 hypothetical protein compare
Atu6036 -0.6 -0.8 entry-exclusion protein compare
Atu1850 -0.6 -2.0 phosphoribosylformylglycinamidine synthetase II compare
Atu1213 -0.6 -1.6 hypothetical protein compare
Atu0322 -0.6 -2.7 enoyl CoA hydratase compare
Atu1685 -0.6 -0.7 hypothetical protein compare
Atu1503 -0.6 -0.8 hypothetical protein compare
Atu3496 -0.6 -2.3 hypothetical protein compare
Atu2238 -0.6 -2.6 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0479 -0.6 -2.7 ABC transporter, substrate binding protein (amino acid) compare
Atu2692 -0.6 -2.6 intracellular septation protein compare
Atu1007 -0.6 -2.2 hypothetical protein compare
Atu2657 -0.6 -1.4 hypothetical protein compare
Atu4108 -0.6 -3.5 ribonuclease D compare
Atu2237 -0.6 -2.5 cytochrome c1 compare
Atu0073 -0.6 -2.6 recF-like protein compare
Atu4881 -0.6 -3.5 hypothetical protein compare
Atu4527 -0.6 -1.2 hypothetical protein compare
Atu0185 -0.6 -1.9 methylglyoxal synthase compare
Atu0464 -0.6 -3.3 hypothetical protein compare
Atu3482 -0.6 -3.2 pantoate--beta-alanine ligase compare
Atu3023 -0.6 -3.3 sugar ABC transporter permease compare
Atu8046 -0.6 -1.7 hypothetical protein compare
Atu3031 -0.6 -1.0 hypothetical protein compare
Atu4866 -0.6 -4.3 hypothetical protein compare
Atu0812 -0.6 -1.4 hypothetical protein compare
Atu4876 -0.6 -3.9 oxidoreductase compare
Atu6197 -0.6 -1.9 agrocinopine phosphodiesterase compare
Atu1660 -0.6 -2.8 hypothetical protein compare
Atu2343 -0.6 -2.0 acetyltransferase compare
Atu1447 -0.6 -1.3 two component sensor kinase compare
Atu4446 -0.6 -3.2 hypothetical protein compare
Atu2113 -0.6 -1.8 N-acetylmuramoyl-L-alanine amidase compare
Atu0026 -0.5 -0.6 hypothetical protein compare
Atu0532 -0.5 -2.1 hypothetical protein compare
Atu1845 -0.5 -1.1 phosphoribosylformylglycinamidine synthase I compare
Atu2052 -0.5 -2.3 hypothetical protein compare
Atu1588 -0.5 -2.9 homoserine dehydrogenase compare
Atu8036 -0.5 -1.7 protein YBGT-like protein compare
Atu0319 -0.5 -0.7 ubiquinone biosynthesis protein compare
Atu0295 -0.5 -1.2 hypothetical protein compare
Atu0956 -0.5 -2.5 phage prohead protease compare
Atu3019 -0.5 -3.7 hypothetical protein compare
Atu1444 -0.5 -1.9 nitrogen regulation protein compare
Atu3115 -0.5 -3.3 TetR family transcriptional regulator compare
Atu1838 -0.5 -1.6 ABC transporter, substrate binding protein (amino acid) compare
Atu1177 -0.5 -2.1 hypothetical protein compare
Atu6030 -0.5 -2.3 ORF13 hypothetical protein compare
Atu0029 -0.5 -2.3 S-adenosylhomocysteine hydrolase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress Cesium chloride across organisms