| | gene | name | fitness | t score | description | |
|---|
| b4042 | dgkA | -4.1 | -4.0 | diacylglycerol kinase (NCBI) | compare |
| b3979 | thrT | -4.1 | -2.2 | tRNA-Thr (NCBI) | compare |
| b3398 | yrfF | -3.6 | -4.8 | predicted inner membrane protein (NCBI) | compare |
| b0161 | degP | -3.5 | -9.0 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0430 | cyoC | -3.4 | -6.0 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3463 | ftsE | -3.4 | -5.1 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b0200 | gmhB | -3.4 | -2.3 | hypothetical protein (NCBI) | compare |
| b4375 | prfC | -3.3 | -9.7 | peptide chain release factor 3 (NCBI) | compare |
| b3609 | secB | -3.3 | -6.4 | export protein SecB (NCBI) | compare |
| b1292 | sapC | -3.3 | -4.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0630 | lipB | -3.2 | -3.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b3725 | pstB | -3.1 | -3.0 | phosphate transporter subunit (NCBI) | compare |
| b3912 | cpxR | -3.1 | -12.6 | DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) | compare |
| b3619 | rfaD | -3.1 | -4.7 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b0428 | cyoE | -3.1 | -9.9 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2330 | yfcB | -3.1 | -4.1 | putative adenine-specific methylase (VIMSS) | compare |
| b3621 | rfaC | -3.0 | -6.4 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b2894 | xerD | -3.0 | -2.8 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1293 | sapB | -2.9 | -3.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b4172 | hfq | -2.9 | -3.3 | RNA-binding protein Hfq (NCBI) | compare |
| b0429 | cyoD | -2.9 | -7.2 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b1236 | galU | -2.8 | -8.5 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b3290 | trkA | -2.8 | -4.2 | potassium transporter peripheral membrane component (NCBI) | compare |
| b0053 | surA | -2.8 | -7.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b1095 | fabF | -2.7 | -10.5 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b0740 | tolB | -2.7 | -8.1 | translocation protein TolB precursor (NCBI) | compare |
| b3052 | rfaE | -2.7 | -6.9 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b0739 | tolA | -2.7 | -6.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4177 | purA | -2.6 | -5.2 | adenylosuccinate synthetase (NCBI) | compare |
| b0222 | lpcA | -2.6 | -3.9 | phosphoheptose isomerase (NCBI) | compare |
| b2830 | nudH | -2.6 | -2.5 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b0431 | cyoB | -2.6 | -13.2 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b3162 | deaD | -2.6 | -8.1 | inducible ATP-independent RNA helicase (VIMSS) | compare |
| b3839 | tatC | -2.6 | -10.9 | TatABCE protein translocation system subunit (NCBI) | compare |
| b3620 | rfaF | -2.5 | -6.8 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3631 | rfaG | -2.5 | -17.9 | glucosyltransferase I (NCBI) | compare |
| b0738 | tolR | -2.4 | -4.9 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0439 | lon | -2.4 | -7.5 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b3613 | yibP | -2.3 | -8.0 | putative membrane protein (VIMSS) | compare |
| b3169 | nusA | -2.3 | -4.0 | transcription elongation factor NusA (NCBI) | compare |
| b0726 | sucA | -2.3 | -5.5 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b2285 | nuoE | -2.3 | -3.3 | NADH dehydrogenase subunit E (NCBI) | compare |
| b2699 | recA | -2.2 | -3.6 | recombinase A (NCBI) | compare |
| b0432 | cyoA | -2.2 | -10.5 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b2280 | nuoJ | -2.2 | -7.3 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3849 | trkH | -2.2 | -12.9 | potassium transporter (NCBI) | compare |
| b2284 | nuoF | -2.2 | -6.7 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b1291 | sapD | -2.2 | -3.4 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2286 | nuoC | -2.2 | -7.8 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b3860 | dsbA | -2.1 | -10.9 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b0118 | acnB | -2.1 | -4.9 | aconitate hydratase (NCBI) | compare |
| b0890 | ftsK | -2.1 | -10.0 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3838 | tatB | -2.1 | -8.9 | sec-independent translocase (NCBI) | compare |
| b2287 | nuoB | -2.1 | -5.8 | NADH dehydrogenase subunit B (NCBI) | compare |
| b0437 | clpP | -2.0 | -8.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1185 | dsbB | -2.0 | -4.2 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b3462 | ftsX | -2.0 | -7.8 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3842 | rfaH | -2.0 | -6.7 | transcriptional activator RfaH (NCBI) | compare |
| b0149 | mrcB | -1.9 | -12.9 | penicillin-binding protein 1b (NCBI) | compare |
| b3204 | ptsN | -1.9 | -6.8 | sugar-specific enzyme IIA component of PTS (NCBI) | compare |
| b2279 | nuoK | -1.9 | -3.0 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3844 | fre | -1.9 | -7.3 | NAD(P)H-flavin reductase (NCBI) | compare |
| b0721 | sdhC | -1.9 | -6.4 | succinate dehydrogenase cytochrome b556 large membrane subunit (NCBI) | compare |
| b3630 | rfaP | -1.9 | -12.2 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b2281 | nuoI | -1.9 | -4.2 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2935 | tktA | -1.9 | -4.2 | transketolase 1, thiamin-binding (NCBI) | compare |
| b3390 | aroK | -1.8 | -2.8 | shikimate kinase I (NCBI) | compare |
| b0438 | clpX | -1.8 | -8.6 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b2688 | gshA | -1.8 | -7.9 | glutamate--cysteine ligase (NCBI) | compare |
| b2277 | nuoM | -1.8 | -7.7 | NADH dehydrogenase subunit M (NCBI) | compare |
| b0720 | gltA | -1.8 | -5.2 | citrate synthase (NCBI) | compare |
| b0049 | apaH | -1.8 | -6.9 | diadenosinetetraphosphatase (NCBI) | compare |
| b2620 | smpB | -1.8 | -3.7 | SsrA-binding protein (NCBI) | compare |
| b3871 | bipA | -1.8 | -10.4 | GTP-binding protein (NCBI) | compare |
| b2297 | pta | -1.7 | -2.2 | phosphate acetyltransferase (NCBI) | compare |
| b1290 | sapF | -1.7 | -2.9 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0722 | sdhD | -1.7 | -5.3 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b4239 | treC | -1.7 | -6.9 | trehalose-6-P hydrolase (NCBI) | compare |
| b0427 | yajR | -1.7 | -10.1 | putative transport protein (VIMSS) | compare |
| b1090 | plsX | -1.7 | -6.2 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b3811 | xerC | -1.7 | -3.7 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2276 | nuoN | -1.7 | -6.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b1109 | ndh | -1.7 | -5.4 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b1235 | rssB | -1.7 | -8.6 | response regulator of RpoS (NCBI) | compare |
| b2283 | nuoG | -1.7 | -8.7 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2278 | nuoL | -1.7 | -10.0 | NADH dehydrogenase subunit L (NCBI) | compare |
| b0688 | pgm | -1.7 | -4.9 | phosphoglucomutase (NCBI) | compare |
| b3465 | yhhF | -1.6 | -7.2 | predicted methyltransferase (NCBI) | compare |
| b0741 | pal | -1.6 | -4.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3082 | ygjM | -1.6 | -3.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3386 | rpe | -1.6 | -1.8 | ribulose-phosphate 3-epimerase (NCBI) | compare |
| b3414 | gntY | -1.6 | -6.7 | predicted gluconate transport associated protein (NCBI) | compare |
| b2822 | recC | -1.6 | -6.6 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2906 | visC | -1.6 | -7.1 | hypothetical protein (NCBI) | compare |
| b3426 | glpD | -1.6 | -7.4 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b4146 | yjeK | -1.6 | -5.1 | predicted lysine aminomutase (NCBI) | compare |
| b2282 | nuoH | -1.6 | -3.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0723 | sdhA | -1.6 | -9.0 | succinate dehydrogenase flavoprotein subunit (NCBI) | compare |
| b0737 | tolQ | -1.6 | -3.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3792 | wzxE | -1.5 | -9.0 | O-antigen translocase (NCBI) | compare |
| b3095 | yqjA | -1.5 | -9.2 | conserved inner membrane protein (NCBI) | compare |
| b0724 | sdhB | -1.5 | -5.7 | succinate dehydrogenase, FeS subunit (NCBI) | compare |
| b3977 | tyrU | -1.5 | -1.4 | tRNA-Tyr (NCBI) | compare |
| b3870 | glnA | -1.5 | -3.5 | glutamine synthetase (NCBI) | compare |
| b3026 | qseC | -1.5 | -6.2 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b0683 | fur | -1.5 | -2.4 | ferric uptake regulator (NCBI) | compare |
| b2947 | gshB | -1.5 | -5.4 | glutathione synthetase (NCBI) | compare |
| b4222 | ytfP | -1.5 | -5.8 | hypothetical protein (NCBI) | compare |
| b2567 | rnc | -1.4 | -2.2 | ribonuclease III (NCBI) | compare |
| b3727 | pstC | -1.4 | -7.1 | phosphate transporter subunit (NCBI) | compare |
| b3237 | argR | -1.4 | -5.7 | arginine repressor (NCBI) | compare |
| b1105 | ycfM | -1.4 | -4.3 | predicted outer membrane lipoprotein (NCBI) | compare |
| b3493 | pitA | -1.4 | -8.4 | phosphate transporter, low-affinity (NCBI) | compare |
| b2808 | gcvA | -1.4 | -5.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0957 | ompA | -1.3 | -2.7 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b4155 | yjeA | -1.3 | -1.9 | putative lysyl-tRNA synthetase (VIMSS) | compare |
| b0464 | acrR | -1.3 | -8.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0729 | sucD | -1.3 | -3.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b3726 | pstA | -1.3 | -5.7 | phosphate transporter subunit (NCBI) | compare |
| b1861 | ruvA | -1.3 | -2.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4685 | yrbN | -1.3 | -2.7 | expressed protein (RefSeq) | compare |
| b1863 | ruvC | -1.3 | -2.8 | Holliday junction resolvase (NCBI) | compare |
| b0114 | aceE | -1.3 | -2.9 | pyruvate dehydrogenase subunit E1 (NCBI) | compare |
| b3741 | gidA | -1.3 | -7.4 | glucose-inhibited division protein A (NCBI) | compare |
| b3472 | b3472 | -1.3 | -7.2 | orf, hypothetical protein (VIMSS) | compare |
| b3863 | polA | -1.3 | -1.8 | DNA polymerase I (NCBI) | compare |
| b3728 | pstS | -1.3 | -4.9 | phosphate transporter subunit (NCBI) | compare |
| b3806 | cyaA | -1.2 | -5.8 | adenylate cyclase (NCBI) | compare |
| b1084 | rne | -1.2 | -4.9 | fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) | compare |
| b4139 | aspA | -1.2 | -7.5 | aspartate ammonia-lyase (aspartase) (VIMSS) | compare |
| b2820 | recB | -1.2 | -3.0 | exonuclease V (RecBCD complex), beta subunit (NCBI) | compare |
| b3962 | udhA | -1.2 | -7.4 | putative oxidoreductase (VIMSS) | compare |
| b1961 | dcm | -1.2 | -2.4 | DNA cytosine methylase (NCBI) | compare |
| b3911 | cpxA | -1.2 | -8.4 | two-component sensor protein (NCBI) | compare |
| b3232 | yhcM | -1.1 | -6.8 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b3706 | trmE | -1.1 | -5.5 | tRNA modification GTPase (NCBI) | compare |
| b4438 | cyaR | -1.1 | -2.9 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b1286 | rnb | -1.1 | -3.2 | exoribonuclease II (NCBI) | compare |
| b3387 | dam | -1.1 | -8.4 | DNA adenine methylase (NCBI) | compare |
| b1187 | fadR | -1.1 | -3.3 | fatty acid metabolism regulator (NCBI) | compare |
| b2939 | yqgB | -1.1 | -1.9 | predicted protein (RefSeq) | compare |
| b2937 | speB | -1.1 | -6.0 | agmatinase (NCBI) | compare |
| b2340 | sixA | -1.0 | -3.6 | phosphohistidine phosphatase (NCBI) | compare |
| b1400 | paaY | -1.0 | -2.2 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b3107 | yhaL | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b3281 | aroE | -1.0 | -8.0 | dehydroshikimate reductase, NAD(P)-binding (NCBI) | compare |
| b4515 | ybgT | -1.0 | -1.8 | hypothetical protein (NCBI) | compare |
| b0728 | sucC | -1.0 | -4.7 | succinyl-CoA synthetase subunit beta (NCBI) | compare |
| b1175 | minD | -1.0 | -4.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2910 | zapA | -1.0 | -4.1 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b3791 | rffA | -1.0 | -5.6 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b4481 | rffT | -1.0 | -5.1 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0928 | aspC | -1.0 | -5.1 | aspartate aminotransferase, PLP-dependent (NCBI) | compare |
| b2512 | yfgL | -1.0 | -4.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b3424 | glpG | -0.9 | -6.6 | predicted intramembrane serine protease (NCBI) | compare |
| b0888 | trxB | -0.9 | -2.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b2104 | thiM | -0.9 | -3.0 | hydroxyethylthiazole kinase (NCBI) | compare |
| b1693 | aroD | -0.9 | -5.2 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b0018 | mokC | -0.9 | -1.2 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b3790 | rffC | -0.9 | -4.1 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b0400 | phoR | -0.9 | -5.1 | sensory histidine kinase in two-component regulatory system with PhoB (NCBI) | compare |
| b3210 | arcB | -0.9 | -6.1 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2564 | pdxJ | -0.9 | -3.7 | pyridoxal phosphate biosynthetic protein (NCBI) | compare |
| b4443 | gcvB | -0.9 | -1.4 | GcvB sRNA gene divergent from gcvA (RefSeq) | compare |
| b0767 | ybhE | -0.9 | -3.7 | 6-phosphogluconolactonase (NCBI) | compare |
| b3500 | gor | -0.9 | -1.5 | glutathione reductase (NCBI) | compare |
| b0080 | fruR | -0.9 | -4.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0677 | nagA | -0.9 | -4.7 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b4529 | ydbJ | -0.9 | -1.2 | hypothetical protein (NCBI) | compare |
| b4651 | yibW | -0.9 | -1.9 | no description | compare |
| b1162 | ycgE | -0.9 | -4.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1591 | b1591 | -0.8 | -1.8 | putative oxidoreductase component (VIMSS) | compare |
| b3094 | exuR | -0.8 | -4.1 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b3807 | cyaY | -0.8 | -4.9 | frataxin-like protein (NCBI) | compare |
| b4041 | plsB | -0.8 | -1.8 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b3405 | ompR | -0.8 | -3.5 | osmolarity response regulator (NCBI) | compare |
| b1830 | prc | -0.8 | -4.1 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b0125 | hpt | -0.8 | -3.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2528 | iscA | -0.8 | -1.5 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1448 | yncA | -0.8 | -1.8 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b2436 | hemF | -0.8 | -3.3 | coproporphyrinogen III oxidase (NCBI) | compare |
| b1630 | rsxD | -0.8 | -4.4 | electron transport complex protein RnfD (NCBI) | compare |
| b3164 | pnp | -0.8 | -2.5 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b0051 | ksgA | -0.8 | -3.8 | dimethyladenosine transferase (NCBI) | compare |
| b3260 | dusB | -0.8 | -4.1 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b3628 | rfaB | -0.8 | -6.4 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b0015 | dnaJ | -0.8 | -4.7 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b2569 | lepA | -0.8 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b2288 | nuoA | -0.8 | -2.2 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b0399 | phoB | -0.7 | -4.0 | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) (NCBI) | compare |
| b2518 | ndk | -0.7 | -1.7 | nucleoside diphosphate kinase (NCBI) | compare |
| b4179 | vacB | -0.7 | -4.7 | putative enzyme (VIMSS) | compare |
| b3205 | yhbJ | -0.7 | -2.7 | hypothetical protein (NCBI) | compare |
| b3650 | spoT | -0.7 | -3.4 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b1351 | racC | -0.7 | -2.9 | Rac prophage; predicted protein (NCBI) | compare |
| b1138 | ymfE | -0.7 | -1.1 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b1394 | paaG | -0.7 | -1.9 | enoyl-CoA hydratase (NCBI) | compare |
| b1263 | trpD | -0.7 | -2.1 | bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferase (NCBI) | compare |
| b0226 | dinJ | -0.7 | -2.1 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b3183 | obgE | -0.7 | -1.1 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |