Experiment set4IT036 for Escherichia coli BW25113
LB with toluene 2.5 vol%
Group: stressMedia: LB + toluene (2.5 vol%)
Culturing: Keio_ML9, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Mitch on 3/15/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 6 genes in this experiment
For stress toluene in Escherichia coli BW25113
For stress toluene across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Biogenesis of cytochrome c oxidases | 1 |
| Cysteine Biosynthesis | 1 |
| Heat shock dnaK gene cluster extended | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| siroheme biosynthesis | 4 | 4 | 2 |
| factor 430 biosynthesis | 7 | 3 | 2 |
| cob(II)yrinate a,c-diamide biosynthesis II (late cobalt incorporation) | 13 | 2 | 2 |
| cob(II)yrinate a,c-diamide biosynthesis I (early cobalt insertion) | 15 | 3 | 2 |
| adenosylcobalamin biosynthesis II (aerobic) | 33 | 17 | 2 |
| adenosylcobalamin biosynthesis I (anaerobic) | 36 | 16 | 2 |