Experiment set4IT035 for Agrobacterium fabrum C58

Compare to:

R2A with silver chloride 5 mM

200 most important genes:

  gene name fitness t score description  
Atu1030 -4.0 -2.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0184 -2.7 -4.2 glucokinase compare
Atu2289 -2.6 -11.9 anthranilate synthase component I and II compare
Atu1687 -2.2 -6.1 anthranilate phosphoribosyltransferase compare
Atu0017 -2.2 -2.3 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1308 -2.1 -6.3 aspartate carbamoyl transferase catalytic subunit compare
Atu3031 -2.1 -2.2 hypothetical protein compare
Atu4616 -2.1 -2.4 dTDP-4-dehydrorhamnose reductase compare
Atu0399 -2.1 -6.0 dihydroorotase compare
Atu1307 -1.9 -4.2 dihydroorotase compare
Atu1845 -1.9 -4.1 phosphoribosylformylglycinamidine synthase I compare
Atu1688 -1.8 -3.9 indole-3-glycerol-phosphate synthase compare
Atu0434 -1.8 -3.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2710 -1.7 -6.9 hypothetical protein compare
Atu0103 -1.7 -8.0 penicillin-binding protein compare
Atu0400 -1.7 -4.9 orotate phosphoribosyltransferase compare
Atu2692 -1.7 -4.5 intracellular septation protein compare
Atu2125 -1.6 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0486 -1.6 -4.6 dihydroorotate dehydrogenase compare
Atu0346 -1.5 -3.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1705 -1.5 -3.4 SEC-independent protein translocase protein compare
Atu1163 -1.5 -2.3 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2616 -1.5 -9.5 hypothetical protein compare
Atu4773 -1.5 -2.2 two component response regulator compare
Atu1686 -1.5 -7.6 peptidyl-prolyl cis-trans isomerse D compare
Atu2615 -1.4 -8.1 hypothetical protein compare
Atu1131 -1.4 -7.2 outer membrane protein compare
Atu2057 -1.4 -2.4 DNA helicase II compare
Atu1446 -1.4 -2.0 two component response regulator compare
Atu1850 -1.4 -3.0 phosphoribosylformylglycinamidine synthetase II compare
Atu4897 -1.3 -2.3 hypothetical protein compare
Atu2662 -1.3 -2.0 acetyltransferase compare
Atu0972 -1.3 -6.1 lipA protein compare
Atu0647 -1.3 -5.0 phosphoribosylamine--glycine ligase compare
Atu0784 -1.3 -3.0 hypothetical protein compare
Atu0419 -1.2 -2.0 two component sensor kinase compare
Atu0298 -1.2 -3.4 orotidine 5 compare
Atu1844 -1.2 -2.6 Phosphoribosylformylglycinamidine synthetase compare
Atu2728 -1.1 -3.3 beta (1-->2) glucan export ATP-binding protein compare
Atu3014 -1.1 -1.6 hypothetical protein compare
Atu2368 -1.1 -1.5 hypothetical protein compare
Atu0977 -1.1 -3.6 serine protease DO-like protease compare
Atu3754 -1.1 -3.3 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3012 -1.0 -2.1 hypothetical protein compare
Atu5157 -1.0 -2.7 hypothetical protein compare
Atu0971 -1.0 -3.7 two component sensor kinase compare
Atu2207 -1.0 -2.6 two component sensor kinase compare
Atu2798 -1.0 -3.8 precorrin-6y methyltransferase compare
Atu2442 -1.0 -2.6 hypothetical protein compare
Atu1075 -1.0 -4.9 amidophosphoribosyltransferase compare
Atu1140 -1.0 -4.0 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3468 -1.0 -1.0 hypothetical protein compare
Atu1891 -1.0 -3.0 cobalamin biosynthesis protein compare
Atu0422 -1.0 -1.5 ABC transporter, membrane spanning protein compare
Atu1028 -1.0 -2.5 hypothetical protein compare
Atu1327 -1.0 -2.6 NADH-ubiquinone oxidoreductase compare
Atu2808 -0.9 -4.3 cobyric acid synthase compare
Atu4884 -0.9 -3.8 hypothetical protein compare
Atu0190 -0.9 -4.4 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1141 -0.9 -2.7 Phosphoribosylglycinamide synthetase compare
Atu1468 -0.9 -3.4 hypothetical protein compare
Atu1588 -0.9 -4.5 homoserine dehydrogenase compare
Atu4053 -0.9 -1.6 succinoglycan biosynthesis protein compare
Atu4881 -0.9 -4.1 hypothetical protein compare
Atu2682 -0.9 -3.4 hypothetical protein compare
Atu3183 -0.9 -0.9 hypothetical protein compare
Atu1714 -0.9 -1.3 exonuclease III compare
Atu0189 -0.9 -3.1 ABC transporter, membrane spanning protein (peptide) compare
Atu2807 -0.9 -3.2 cob(I)alamin adenosyltransferase compare
Atu5513 -0.9 -1.2 cold shock protein compare
Atu4614 -0.9 -4.6 glycosyltransferase compare
Atu0979 -0.9 -4.6 two component sensor kinase compare
Atu0401 -0.9 -4.8 fructokinase compare
Atu6036 -0.9 -0.8 entry-exclusion protein compare
Atu0388 -0.8 -5.6 two component sensor kinase compare
Atu4166 -0.8 -1.9 UDP-glucose 4-epimerase compare
Atu8054 -0.8 -0.5 hypothetical protein compare
Atu2193 -0.8 -1.0 hypothetical protein compare
Atu4617 -0.8 -5.2 dTDP-D-glucose-4,6-dehydratase compare
Atu4848 -0.8 -3.5 2-deoxyribose-5-phosphate aldolase compare
Atu5540 -0.8 -0.7 hypothetical protein compare
Atu4887 -0.8 -1.6 hypothetical protein compare
Atu2650 -0.8 -4.8 glycerol-3-phosphate dehydrogenase compare
Atu0280 -0.8 -1.5 hypothetical protein compare
Atu4866 -0.8 -3.2 hypothetical protein compare
Atu0026 -0.8 -0.9 hypothetical protein compare
Atu3353 -0.8 -6.0 mannose-1-phosphate guanylyltransferase compare
Atu0421 -0.8 -1.2 ABC transporter, membrane spanning protein compare
Atu2683 -0.8 -1.3 hypothetical protein compare
Atu1810 -0.8 -1.0 hypothetical protein compare
Atu0030 -0.8 -1.2 phosphocarrier protein HPr compare
Atu2113 -0.8 -2.1 N-acetylmuramoyl-L-alanine amidase compare
Atu3759 -0.8 -1.2 hypothetical protein compare
Atu0966 -0.8 -1.4 hypothetical protein compare
Atu4613 -0.8 -5.7 glycosyltransferase compare
Atu4845 -0.8 -5.9 sugar ABC transporter permease compare
Atu1344 -0.8 -1.7 hypothetical protein compare
Atu0912 -0.8 -1.0 Na+/H+ antiporter compare
Atu5485 -0.8 -1.2 hypothetical protein compare
Atu2237 -0.8 -1.9 cytochrome c1 compare
Atu4317 -0.7 -1.6 TetR family transcriptional regulator compare
Atu3763 -0.7 -1.6 hypothetical protein compare
Atu2073 -0.7 -2.0 membrane protein compare
Atu2809 -0.7 -3.0 cobalamin biosynthesis protein compare
Atu3052 -0.7 -2.8 MarR family transcriptional regulator compare
Atu5427 -0.7 -2.0 hypothetical protein compare
Atu0943 -0.7 -1.7 hypothetical protein compare
Atu4854 -0.7 -2.6 hypothetical protein compare
Atu4882 -0.7 -1.3 hypothetical protein compare
Atu1380 -0.7 -2.9 zinc metallopeptidase compare
Atu4853 -0.7 -3.0 hypothetical protein compare
Atu8025 -0.7 -0.9 hypothetical protein compare
Atu1620 -0.7 -4.1 triosephosphate isomerase compare
Atu6157 -0.7 -3.5 conserved hypothetical protein compare
Atu4711 -0.7 -3.1 two component sensor kinase compare
Atu4792 -0.7 -1.1 hypothetical protein compare
Atu5169 -0.7 -2.0 type IV secretion protein AvhB8 compare
Atu2183 -0.7 -3.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu1774 -0.7 -3.2 ABC transporter, substrate binding protein (peptide) compare
Atu4418 -0.7 -2.6 glutaryl-CoA dehydrogenase compare
Atu0331 -0.7 -1.7 sigma-54 modulation protein compare
Atu8093 -0.7 -2.9 hypothetical protein compare
Atu0185 -0.7 -3.1 methylglyoxal synthase compare
Atu3032 -0.7 -2.2 hypothetical protein compare
Atu2067 -0.7 -0.9 hypothetical protein compare
Atu1285 -0.7 -3.6 metal dependent hydrolase compare
Atu0598 -0.7 -3.1 phosphogluconate dehydratase compare
Atu1644 -0.7 -2.1 hypothetical protein compare
Atu4093 -0.7 -2.2 hypothetical protein compare
Atu1968 -0.7 -1.5 hypothetical protein compare
Atu8202 -0.7 -2.3 hypothetical protein compare
Atu1223 -0.7 -0.9 hypothetical protein compare
Atu0188 -0.7 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu3042 -0.7 -2.8 hypothetical protein compare
Atu4843 -0.7 -4.3 sugar ABC transporter ATPase compare
Atu4618 -0.7 -4.2 dTDP-rhamnose-3,5-epimerase compare
Atu4346 -0.7 -2.5 hypothetical protein compare
Atu5114 -0.7 -2.0 hypothetical protein compare
Atu0454 -0.7 -3.6 hypothetical protein compare
Atu0322 -0.7 -3.0 enoyl CoA hydratase compare
Atu5115 -0.7 -1.2 hypothetical protein compare
Atu0566 -0.7 -1.1 hypothetical protein compare
Atu3016 -0.7 -3.0 phosphoglyceromutase compare
Atu3027 -0.7 -3.6 dehydrogenase compare
Atu3469 -0.7 -0.9 phosphoglyceromutase compare
Atu0236 -0.6 -1.6 hypothetical protein compare
Atu1677 -0.6 -1.6 queuine tRNA-ribosyltransferase compare
Atu0031 -0.6 -1.1 PTS system, IIA component compare
Atu3579 -0.6 -1.8 lactoylglutathione lyase compare
Atu4873 -0.6 -1.8 TetR family transcriptional regulator compare
Atu4850 -0.6 -3.3 hypothetical protein compare
Atu0510 -0.6 -4.2 pH adaption potassium efflux system protein compare
Atu1793 -0.6 -3.9 phosphatidylcholine synthase compare
Atu2238 -0.6 -3.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0029 -0.6 -2.5 S-adenosylhomocysteine hydrolase compare
Atu4852 -0.6 -2.6 hypothetical protein compare
Atu4232 -0.6 -3.1 GntR family transcriptional regulator compare
Atu5088 -0.6 -1.6 hypothetical protein compare
Atu5430 -0.6 -0.4 hypothetical protein compare
Atu3755 -0.6 -2.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3121 -0.6 -0.8 cold shock protein compare
Atu3311 -0.6 -4.4 phosphomannose isomerase compare
Atu4858 -0.6 -4.7 virulence virD4-like protein compare
Atu0769 -0.6 -1.0 protoheme IX farnesyltransferase compare
Atu2800 -0.6 -2.0 precorrin-3B C17-methyltransferase compare
Atu4846 -0.6 -4.4 hypothetical protein compare
Atu3030 -0.6 -2.4 hypothetical protein compare
Atu4849 -0.6 -3.9 NADP-dependent aldehyde dehydrogenase compare
Atu3011 -0.6 -1.3 ArsR family transcriptional regulator compare
Atu4860 -0.6 -3.4 hypothetical protein compare
Atu4867 -0.6 -3.7 hypothetical protein compare
Atu4847 -0.6 -3.8 ribokinase compare
Atu4803 -0.6 -2.5 two component response regulator compare
Atu0978 -0.6 -3.0 two component response regulator compare
Atu0051 -0.6 -2.3 two component sensor kinase compare
Atu4875 -0.6 -2.9 hypothetical protein compare
Atu6195 -0.6 -1.7 conserved hypothetical protein compare
Atu4869 -0.6 -1.4 hypothetical protein compare
Atu4108 -0.6 -2.5 ribonuclease D compare
Atu2804 -0.6 -4.3 cobaltochelatase subunit compare
Atu4880 -0.6 -3.7 AraC family transcriptional regulator compare
Atu3013 -0.6 -2.3 hypothetical protein compare
Atu0471 -0.6 -1.8 hypothetical protein compare
Atu4791 -0.6 -2.5 hypothetical protein compare
Atu4827 -0.6 -4.0 ABC transporter permease compare
Atu3019 -0.6 -3.5 hypothetical protein compare
Atu1760 -0.6 -0.9 hypothetical protein compare
Atu4838 -0.6 -2.7 outer membrane lipoprotein compare
Atu0973 -0.6 -3.3 cycH protein compare
Atu3037 -0.6 -3.3 dipeptide ABC transporter permease compare
Atu1457 -0.6 -1.3 hypothetical protein compare
Atu3731 -0.6 -3.5 5-formyltetrahydrofolate cyclo-ligase compare
Atu4870 -0.6 -3.6 NADP-dependent quinone oxidoreductase compare
Atu3008 -0.6 -0.8 hypothetical protein compare
Atu1302 -0.5 -1.4 hypothetical protein compare
Atu2200 -0.5 -1.2 cold shock protein compare
Atu4861 -0.5 -3.5 IS21 family transposase compare
Atu4862 -0.5 -4.3 IS21 family transposase compare
Atu4615 -0.5 -3.8 glucose-1-phosphate thymidylyltransferase compare
Atu4865 -0.5 -3.7 oxidoreductase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress silver chloride across organisms