Experiment set4IT034 for Agrobacterium fabrum C58

Compare to:

R2A with mercury (II) chloride 0.002 mM

200 most important genes:

  gene name fitness t score description  
Atu1687 -3.7 -7.8 anthranilate phosphoribosyltransferase compare
Atu1030 -2.6 -2.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2289 -2.6 -13.0 anthranilate synthase component I and II compare
Atu0434 -2.6 -3.5 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1308 -2.1 -3.8 aspartate carbamoyl transferase catalytic subunit compare
Atu1688 -2.0 -4.6 indole-3-glycerol-phosphate synthase compare
Atu1307 -1.8 -4.9 dihydroorotase compare
Atu1446 -1.8 -2.8 two component response regulator compare
Atu4773 -1.7 -2.0 two component response regulator compare
Atu2710 -1.7 -8.3 hypothetical protein compare
Atu0399 -1.6 -5.2 dihydroorotase compare
Atu3730 -1.5 -1.2 hypothetical protein compare
Atu0031 -1.5 -2.0 PTS system, IIA component compare
Atu3120 -1.4 -1.6 hypothetical protein compare
Atu0400 -1.4 -4.8 orotate phosphoribosyltransferase compare
Atu2193 -1.4 -1.4 hypothetical protein compare
Atu2684 -1.4 -1.5 hypothetical protein compare
Atu1163 -1.4 -2.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0421 -1.4 -1.7 ABC transporter, membrane spanning protein compare
Atu0486 -1.4 -4.8 dihydroorotate dehydrogenase compare
Atu1028 -1.3 -2.2 hypothetical protein compare
Atu0017 -1.3 -1.5 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2249 -1.2 -1.1 hypothetical protein compare
Atu3754 -1.2 -4.2 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1686 -1.2 -7.3 peptidyl-prolyl cis-trans isomerse D compare
Atu0298 -1.2 -4.0 orotidine 5 compare
Atu0647 -1.2 -4.0 phosphoribosylamine--glycine ligase compare
Atu0190 -1.2 -5.9 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0723 -1.2 -2.0 FAD dependent oxidoreductase compare
Atu0039 -1.2 -1.4 imidazoleglycerol-phosphate synthase cyclase compare
Atu0184 -1.2 -1.9 glucokinase compare
Atu0025 -1.1 -1.8 hypothetical protein compare
Atu3005 -1.1 -1.9 hypothetical protein compare
Atu2267 -1.1 -4.0 hypothetical protein compare
Atu0185 -1.1 -3.6 methylglyoxal synthase compare
Atu1754 -1.1 -2.1 hypothetical protein compare
Atu0346 -1.1 -2.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2113 -1.1 -2.5 N-acetylmuramoyl-L-alanine amidase compare
Atu0103 -1.1 -6.1 penicillin-binding protein compare
Atu0189 -1.0 -3.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1140 -1.0 -2.9 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1110 -1.0 -2.8 cytosol aminopeptidase compare
Atu1844 -1.0 -1.7 Phosphoribosylformylglycinamidine synthetase compare
Atu1774 -1.0 -6.8 ABC transporter, substrate binding protein (peptide) compare
Atu4217 -1.0 -1.0 TetR family transcriptional regulator compare
Atu3579 -1.0 -3.3 lactoylglutathione lyase compare
Atu8138 -1.0 -1.6 hypothetical protein compare
Atu1359 -1.0 -1.0 dnaK deletion suppressor protein compare
Atu6036 -1.0 -0.8 entry-exclusion protein compare
Atu1075 -0.9 -3.5 amidophosphoribosyltransferase compare
Atu0972 -0.9 -3.7 lipA protein compare
Atu2802 -0.9 -3.9 precorrin-8X methylmutase compare
Atu4882 -0.9 -2.7 hypothetical protein compare
Atu3497 -0.9 -2.3 hypothetical protein compare
Atu0041 -0.9 -1.4 glutamine amidotransferase compare
Atu0188 -0.8 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1364 -0.8 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0598 -0.8 -4.5 phosphogluconate dehydratase compare
Atu3634 -0.8 -4.3 penicillin-binding protein dacf precursor compare
Atu1739 -0.8 -3.1 permease compare
Atu4317 -0.8 -2.4 TetR family transcriptional regulator compare
Atu2800 -0.8 -0.9 precorrin-3B C17-methyltransferase compare
Atu1355 -0.8 -4.1 hypothetical protein compare
Atu4897 -0.8 -1.6 hypothetical protein compare
Atu1685 -0.8 -0.8 hypothetical protein compare
Atu4567 -0.8 -3.8 ROK family transcriptional regulator compare
Atu0941 -0.8 -0.7 hypothetical protein compare
Atu2067 -0.7 -1.0 hypothetical protein compare
Atu5045 -0.7 -1.7 hypothetical protein compare
Atu2793 -0.7 -3.1 cobyrinic acid a,c-diamide synthase compare
Atu5125 -0.7 -2.9 GntR family transcriptional regulator compare
Atu1468 -0.7 -3.4 hypothetical protein compare
Atu2439 -0.7 -1.0 hypothetical protein compare
Atu3706 -0.7 -3.4 D-3-phosphoglycerate dehydrogenase compare
Atu1891 -0.7 -1.8 cobalamin biosynthesis protein compare
Atu5043 -0.7 -2.4 hypothetical protein compare
Atu2127 -0.7 -3.7 L-carnitine dehydratase compare
Atu4166 -0.7 -1.0 UDP-glucose 4-epimerase compare
Atu0101 -0.7 -3.1 cytochrome c compare
Atu5164 -0.7 -0.6 type IV secretion protein AvhB3 compare
Atu1302 -0.7 -2.2 hypothetical protein compare
Atu4418 -0.7 -2.2 glutaryl-CoA dehydrogenase compare
Atu1254 -0.7 -1.3 transcriptional regulator, ArsR family compare
Atu0846 -0.7 -2.7 transcriptional regulator, MarR family compare
Atu3763 -0.7 -1.1 hypothetical protein compare
Atu1542 -0.7 -2.8 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu4894 -0.7 -3.4 transposase compare
Atu2799 -0.7 -2.0 precorrin-6x reductase compare
Atu4857 -0.7 -3.9 mobilization protein C compare
Atu2442 -0.7 -1.5 hypothetical protein compare
Atu0280 -0.7 -1.3 hypothetical protein compare
Atu0894 -0.7 -1.7 ABC transporter, membrane spanning protein compare
Atu3009 -0.7 -1.1 exopolysaccharide production protein compare
Atu1031 -0.7 -2.1 hypothetical protein compare
Atu0895 -0.7 -2.5 ABC transporter, substrate binding protein compare
Atu1354 -0.7 -0.9 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu0726 -0.7 -4.0 ring hydroxylating dioxygenase, alpha-subunit compare
Atu3034 -0.7 -2.5 ROK family transcriptional regulator compare
Atu2809 -0.7 -3.4 cobalamin biosynthesis protein compare
Atu2805 -0.7 -2.8 cobalamin synthesis protein compare
Atu2073 -0.7 -1.9 membrane protein compare
Atu1064 -0.7 -4.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu2798 -0.6 -2.1 precorrin-6y methyltransferase compare
Atu2040 -0.6 -1.9 phosphoserine phosphatase compare
Atu2804 -0.6 -4.5 cobaltochelatase subunit compare
Atu0470 -0.6 -1.6 hypothetical protein compare
Atu2237 -0.6 -2.3 cytochrome c1 compare
Atu8194 -0.6 -2.2 hypothetical protein compare
Atu2808 -0.6 -3.9 cobyric acid synthase compare
Atu4075 -0.6 -2.7 glycogen synthase compare
Atu0471 -0.6 -1.9 hypothetical protein compare
Atu0627 -0.6 -3.4 carboxymethylenebutenolidase compare
Atu1141 -0.6 -3.4 Phosphoribosylglycinamide synthetase compare
Atu1344 -0.6 -1.2 hypothetical protein compare
Atu3486 -0.6 -2.0 DeoR family transcriptional regulator compare
Atu0976 -0.6 -1.3 cycL protein compare
Atu3727 -0.6 -2.3 hypothetical protein compare
Atu2207 -0.6 -2.0 two component sensor kinase compare
Atu0795 -0.6 -1.6 hypothetical protein compare
Atu3016 -0.6 -2.9 phosphoglyceromutase compare
Atu0535 -0.6 -2.4 hypothetical protein compare
Atu3707 -0.6 -1.8 phosphoserine aminotransferase compare
Atu3469 -0.6 -1.1 phosphoglyceromutase compare
Atu0943 -0.6 -1.0 hypothetical protein compare
Atu5468 -0.6 -1.1 hypothetical protein compare
Atu4671 -0.6 -2.3 response regulator compare
Atu2578 -0.6 -1.9 cAMP-dependent protein kinase regulatory subunit compare
Atu4890 -0.6 -1.1 IS426 transposase compare
Atu4616 -0.6 -1.0 dTDP-4-dehydrorhamnose reductase compare
Atu4680 -0.6 -2.6 amino acid ABC transporter permease compare
Atu0955 -0.6 -2.3 hypothetical protein compare
Atu2728 -0.6 -1.9 beta (1-->2) glucan export ATP-binding protein compare
Atu5034 -0.6 -1.7 hypothetical protein compare
Atu2640 -0.6 -1.5 hypothetical protein compare
Atu2807 -0.6 -2.4 cob(I)alamin adenosyltransferase compare
Atu5173 -0.6 -1.5 dehydrogenase compare
Atu1056 -0.6 -2.4 hypothetical protein compare
Atu1076 -0.5 -2.0 colicin V production protein compare
Atu3478 -0.5 -3.0 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu8052 -0.5 -0.7 hypothetical protein compare
Atu8176 -0.5 -1.1 hypothetical protein compare
Atu5115 -0.5 -0.6 hypothetical protein compare
Atu0026 -0.5 -0.6 hypothetical protein compare
Atu4854 -0.5 -2.1 hypothetical protein compare
Atu3472 -0.5 -2.1 2-oxoisovalerate dehydrogenase subunit beta compare
Atu3588 -0.5 -2.4 DNA-3-methyladenine glycosidase II compare
Atu0029 -0.5 -2.0 S-adenosylhomocysteine hydrolase compare
Atu1462 -0.5 -3.9 glycine cleavage system protein P2 compare
Atu8029 -0.5 -0.9 hypothetical protein compare
Atu2436 -0.5 -1.7 hypothetical protein compare
Atu0503 -0.5 -4.1 enoyl-CoA hydratase compare
Atu0565 -0.5 -2.2 hypothetical protein compare
Atu0401 -0.5 -1.5 fructokinase compare
Atu5424 -0.5 -2.9 oxidoreductase compare
Atu5443 -0.5 -2.7 TetR family transcriptional regulator compare
Atu5046 -0.5 -1.6 hypothetical protein compare
Atu3755 -0.5 -1.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1009 -0.5 -1.0 hypothetical protein compare
Atu3780 -0.5 -1.9 hypothetical protein compare
Atu0931 -0.5 -3.0 penicillin binding protein compare
Atu0773 -0.5 -1.8 surfeit 1 compare
Atu1606 -0.5 -2.1 methionine aminopeptidase compare
Atu2801 -0.5 -1.6 precorrin-2 C20 methyltransferase compare
Atu4448 -0.5 -2.5 sorbitol/mannitol ABC transporter permease compare
Atu4153 -0.5 -2.6 aldehyde dehydrogenase compare
Atu1847 -0.5 -1.0 hypothetical protein compare
Atu0463 -0.5 -1.6 hypothetical protein compare
Atu3571 -0.5 -3.0 hypothetical protein compare
Atu2620 -0.5 -0.9 hypothetical protein compare
Atu4072 -0.5 -0.5 nodulation protein N compare
Atu5088 -0.5 -1.3 hypothetical protein compare
Atu2238 -0.5 -2.2 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu4864 -0.5 -2.2 MarR family transcriptional regulator compare
Atu1470 -0.5 -0.7 Camphor resistance protein compare
Atu8018 -0.5 -0.5 hypothetical protein compare
Atu3150 -0.5 -2.1 sugar ABC transporter permease compare
Atu1851 -0.5 -1.4 BolA/YrbA family protein compare
Atu1850 -0.5 -1.4 phosphoribosylformylglycinamidine synthetase II compare
Atu2766 -0.5 -3.7 NAD-glutamate dehydrogenase compare
Atu4342 -0.5 -1.8 hypothetical protein compare
Atu4366 -0.5 -1.7 short chain dehydrogenase compare
Atu5485 -0.5 -1.3 hypothetical protein compare
Atu5075 -0.5 -2.4 GntR family transcriptional regulator compare
Atu0062 -0.5 -2.4 transcriptional regulator, ROK family compare
Atu1380 -0.5 -2.0 zinc metallopeptidase compare
Atu3293 -0.5 -2.4 D-amino acid dehydrogenase small subunit compare
Atu0142 -0.5 -1.2 cytochrome o ubiquinol oxidase subunit II compare
Atu5162 -0.5 -2.9 type IV secretion protein AvhB1 compare
Atu2293 -0.5 -1.4 hypothetical protein compare
Atu3026 -0.5 -2.7 short chain dehydrogenase compare
Atu0501 -0.5 -3.2 acyl-CoA dehydrogenase compare
Atu0467 -0.5 -1.5 hypothetical protein compare
Atu0897 -0.5 -3.3 protease II compare
Atu2322 -0.5 -1.8 hypothetical protein compare
Atu2831 -0.5 -1.9 glucose inhibited division protein A compare
Atu0469 -0.5 -2.7 hypothetical protein compare
Atu3492 -0.5 -2.0 sugar kinase compare
Atu1678 -0.5 -1.8 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu0166 -0.5 -1.7 hypothetical protein compare
Atu4445 -0.5 -2.3 ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments

For stress mercury (II) chloride across organisms