Experiment set4IT032 for Pseudomonas syringae pv. syringae B728a ΔmexB
KB with Nitrofurantoin 0.0625 mg/ml
Group: stressMedia: KB + Nitrofurantoin (0.0625 mg/ml)
Culturing: SyringaeB728a_mexBdelta_ML3, 24 well microplate, Aerobic, at 28 (C), shaken=250 rpm
By: Tyler Helmann on 6/8/18
Media components: 10 g/L Bacto Peptone, 1.5 g/L Potassium phosphate dibasic, 15 g/L Glycerol, 0.6 g/L Magnesium sulfate
Specific Phenotypes
For 9 genes in this experiment
For stress Nitrofurantoin in Pseudomonas syringae pv. syringae B728a ΔmexB
For stress Nitrofurantoin across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| DNA repair, UvrABC system | 3 |
| DNA repair, bacterial RecFOR pathway | 3 |
| Terminal cytochrome d ubiquinol oxidases | 2 |
| Terminal cytochrome oxidases | 2 |
| DNA-replication | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| aerobic respiration III (alternative oxidase pathway) | 3 | 3 | 1 |